Neofusicoccum parvum: UCRNP2_10035
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Entry
UCRNP2_10035 CDS
T03126
Name
(GenBank) putative atp-dependent rna helicase dhx8 protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
npa
Neofusicoccum parvum
Pathway
npa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRNP2_10035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npa03041
]
UCRNP2_10035
Enzymes [BR:
npa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UCRNP2_10035
Spliceosome [BR:
npa03041
]
Complex C
Other components
Step II factors
UCRNP2_10035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
S1
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_30
AAA_19
T2SSE
ABC_tran
AAA_16
nSTAND3
TsaE
TrwB_AAD_bind
SLFN-g3_helicase
NB-ARC
Ploopntkinase3
DAP3
SRP54
AAA_25
Cas3-like_C_2
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
EOD43262
UniProt:
R1E755
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MDDLSSLELLSLVSKVTSEIQNHLGISDKTLAEFLIAQHLECKSLNDFKAALADVGADDF
PPSLIESIDRLVLTMHPKYKSNGKAKAVEQEEEPQDERERKARVFKGLAIADKEVPRPWE
DEGPLEQNAKEDAMDDTFAMLENLAGKTGGGAGNGSRPRTKNDDYVFEDEFGRSRTARDF
TEKRNYGRDDRREDRRGRHRRRDDYDDDFRKPPPLEVDDTPVLHKVYNGRVTGLKNYGAF
IRLLGVKGKVDGLVHVSRMAEGRVNDPSDLLSRDQEVKVKVTEIKDGKISLTMKEVDQVT
GQDLAPELRIASGANSEGLGGSMSNGRYGNLGSDVPMIENSYNGQPKAKKRMTSPERWET
QQLIASGVLKAADYPELLETFDSVNEHGMIEEEEDIDIEVREEEPPFLVGQTKQSLELSP
IRVVKAPDGSLNRAAMAGDQLAKERRDLRQQEAADKAAQEASRVDLSAQWNDPMAAPDQR
KFASDYRAAPTASKSNEPLPEWKKITQGKTETGKRTDMSIKEQRESLPVFKFRNQLLEAV
HEHQLMILVGDTGSGKTTQLTQFLAEAGFANNGVIGCTQPRRVAAMSVAKRVAEEVGCKL
GAEVGYTIRFEDMTGPDTKIKYMTDGIMQREILLDPMLNKYSVIILDEAHERTIATDVLF
GLLKKTLKRRPDMKVIVTSATLDADKFSEYFNKCPIFSIPGRTFPVEIMYSKEPESDYLD
AALTTVMQIHLTEPPGDILLFLTGKEEIDTSCEVLFERMKALGPGVPELIILPIYGALPS
EVASRIFEPAPAGSRKVVIATNIAETSITIDGIYYVVDPGFVKQTAYDPKLGMDRLQVTP
ISQAQAKQRAGRAGRTGPGKCFRLYTEAAFQSEMLPTTIPEIQRQNLSNTILMLKAMGIN
DLLGFDFMDPPPTNTMLTALEELYALAALDEEGLLTQLGRQMADYPMDPALSKALIMSVK
MQCSEEMLTIVSMISAVQTVWHRPKDKQQQADQKKAKFHDPHGDHLTLLNVYNAWKQSKF
SVHWCYENFIQPKSMKRVQDVREQLATIMKRYKSPIVSAGRSTNIVRQALCSGFFRNSAR
KDPQEGYKTLVEGNPVYLHPSSALFGKPAEHVIFNSVVETTKEYMHVVTAIEPKWLVEAA
PTFFKVAPTDRLSKRKKAERIQPLANKYQGEDDWRLSAQRRQGRGGGGTWG
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctcagctcccttgagctgctctcgctcgtgtccaaggtcacctccgaaatc
caaaatcatctgggcatcagcgacaagaccctcgccgagttcctcatagctcaacacttg
gagtgcaagtccctgaatgatttcaaagcggccctcgccgatgttggcgccgatgatttc
ccaccaagtctcatcgagagcatcgaccgccttgtcctgaccatgcacccaaaatacaaa
tcgaatggcaaggcgaaagccgtcgagcaggaagaagagccgcaagacgagcgcgagagg
aaggcacgagtcttcaaaggcctcgcgatcgccgacaaagaggtgcccaggccctgggag
gacgagggcccgctggagcagaatgcgaaggaggacgcgatggatgacacttttgccatg
ctggagaaccttgccggcaagacaggcggcggagcgggcaatgggagccgcccccgtacg
aagaatgacgactacgttttcgaggatgagttcggcaggtcgcgcaccgctagggacttc
actgagaagcgcaactacggccgtgacgacaggcgcgaggatcggcgaggcaggcaccgc
cgtcgggacgactacgatgacgatttccgcaaaccacctccacttgaagttgatgatact
ccggtgctacacaaagtctacaatggccgcgttactggcctcaagaattatggtgccttt
atccgactcctcggcgtcaagggcaaggtcgatggtcttgttcacgtctcccggatggcc
gaaggccgcgtcaacgatccttcagacctcttgtcccgcgatcaggaagtgaaggtgaag
gttacagagatcaaggatggaaaaatcagccttactatgaaggaggtggaccaggtcaca
ggccaagatcttgcacctgagctgaggatagcctcaggcgcgaactcagagggacttggc
ggcagcatgtcgaatggtcgctacggaaacctgggctctgatgttcccatgatcgaaaac
agctacaatggacagccgaaggcgaagaagagaatgacgtcccctgaacgctgggaaacc
caacagctgatcgcatctggcgtgttaaaggctgcagactatccggagctcctcgagaca
tttgacagtgtcaatgagcacggcatgatcgaagaagaggaggatattgacattgaagtc
agagaagaggaaccgcctttcctggtcggccaaactaaacagtcccttgaactctctccc
attcgtgtcgtcaaggcaccggatggatctctgaacagagccgctatggctggcgatcag
ctagccaaggagagaagagacttgagacagcaagaagcagctgacaaggctgcccaagaa
gcctctagagtcgatcttagcgcacagtggaacgatcctatggctgctcccgaccagcgc
aagtttgccagcgactaccgcgcagcacccacagcgtcaaaatcaaatgaaccacttcca
gagtggaagaagatcacacagggcaagactgaaaccggaaagcgtaccgacatgtccatc
aaggaacagcgagagagtctgcccgtcttcaagttccgtaatcagctgcttgaggcagtg
cacgaacaccagctcatgattctggtcggcgacactggatcgggtaagaccacccagctc
acacagtttcttgccgaggccgggtttgcaaataatggcgtcattggctgcacgcaaccg
cgccgtgtcgccgccatgtcggtcgccaaacgtgtggcggaagaggttggatgcaagctt
ggcgcagaggtcgggtacaccattagattcgaagacatgacaggcccagacacgaaaatc
aagtacatgacggacggtattatgcagcgcgagatccttttggatccgatgctgaacaag
tactctgtcattatccttgacgaggcgcacgagcgcacgatcgccaccgatgtacttttc
ggtctcctcaagaagaccttgaagaggcgtccagacatgaaggtcattgttacctccgca
accctggatgcagacaagttctcggagtacttcaacaagtgccccatcttctccatcccg
ggtcgcacgttcccagttgagatcatgtactcgaaggagcccgagagcgattacctcgac
gctgctctgacaaccgtcatgcaaattcacctcactgagcctccgggtgacattctgttg
ttcttgactggtaaggaggagattgacacaagttgcgaggtcctgttcgagcgtatgaaa
gctttgggacccggagtgcccgaactaatcatattgcccatctacggtgccctccccagt
gaggtagccagccgtatcttcgagcccgcacctgcaggaagcagaaaggtcgtcattgcc
accaacattgcggagacatcgatcaccattgatggaatctactatgttgtcgatcctggt
ttcgtcaagcagaccgcatacgaccccaagcttggtatggatcgcctccaagtcacgcct
atctcgcaagcgcaggccaaacagcgtgctggcagagccgggcgcactggtcctggcaaa
tgctttaggttatacaccgaggccgccttccagtccgaaatgctgccaacgaccattccc
gagatccaacgtcagaacttgtctaacacgattcttatgctcaaggctatgggcatcaac
gaccttcttggcttcgacttcatggaccctcctcccaccaacaccatgttgaccgctttg
gaggagctctacgcactcgctgcgctcgacgaagaaggccttctcacccagctcggtcgg
cagatggccgattaccccatggacccagcactatccaaggcactcatcatgtccgtcaag
atgcaatgctcggaggagatgctcaccatcgtctccatgatctcagccgtccagacggtg
tggcatcggcccaaggacaagcagcagcaagcggaccagaagaaagccaagttccacgac
ccgcacggcgaccacctaacgctgctcaacgtatacaacgcatggaagcagtccaagttc
tcggtgcactggtgctacgagaacttcatccagcccaagtcgatgaagcgcgtgcaggac
gtgcgcgagcagttagccaccatcatgaagcgctacaagtcgcccatcgtgtcggcgggg
cgaagcacgaacatcgtgcgccaggcgctgtgctcaggcttcttccgcaactcggcgcgc
aaggacccgcaagaagggtacaaaacgctcgtcgagggcaaccccgtctacctgcacccg
tcgtccgccctcttcggcaagcctgccgagcacgtcatcttcaactccgtcgtcgagacc
acgaaggagtacatgcatgtcgtcaccgccatcgagccaaagtggcttgtcgaagccgcg
cctactttcttcaaggtcgcgcccacggatcgcctgtccaagcgcaagaaggcggagcgc
atccagccgctggccaacaagtaccagggtgaagacgactggcgtttgtcggctcagagg
aggcagggtcggggtggtggtggtacgtggggttga
DBGET
integrated database retrieval system
