KEGG   Neofusicoccum parvum: UCRNP2_1357
Entry
UCRNP2_1357       CDS       T03126                                 
Name
(GenBank) putative tho complex subunit 3 protein
  KO
K12880  THO complex subunit 3
Organism
npa  Neofusicoccum parvum
Pathway
npa03013  Nucleocytoplasmic transport
npa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:npa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    UCRNP2_1357
  09122 Translation
   03013 Nucleocytoplasmic transport
    UCRNP2_1357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npa03019]
    UCRNP2_1357
   03041 Spliceosome [BR:npa03041]
    UCRNP2_1357
Messenger RNA biogenesis [BR:npa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     UCRNP2_1357
Spliceosome [BR:npa03041]
 Complex C
  Other components
   EJC/TREX
    UCRNP2_1357
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    UCRNP2_1357
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_WDR5 WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_EML_2 WDR55 EIF3I ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_WDR75_1st DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_EML eIF2A WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Cytochrom_D1 Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N CFAP251_N Beta-prop_WDR41 PAC11 Beta-prop_DCAF12 WD40_like WD40_RFWD3 Beta-prop_WDR75_2nd Tricorn_2nd Beta-prop_Nup120_160 choice_anch_I DNAI3_WD
Other DBs
NCBI-ProteinID: EOD51876
UniProt: R1GUB3
LinkDB
Position
Unknown
AA seq 326 aa
MVGPARENILTKAKFPSTFAKRKTQAYSDSSRASQTRNLRTIDWNPLGTLIATGSSDRTL
RVWNPEKPQVKNSTELRGHAGPVERVAWNPTREAELASCSADGTVRFWDVRSKNAVGKVE
VGGDAFTLAWRPDGSELVVGRKAENLQDDVLVPISRSTFTALPAHRQTVQTNQTTFSWTG
QELFLTTGEGQVKIVDYPSMNILHVLNAHTSSCYSVDFSPTAEYLAIGGSDALITLWDTR
DWICQRTLTSMTGPVRSVSFSFDGCYVVGGSDEGVGMEVAYVETGECVHKVETPAPTPCV
QWHPSRYVLAYSDTTGLKIIGGTERF
NT seq 981 nt   +upstreamnt  +downstreamnt
atggtcggccccgcgcgcgagaacatcctgaccaaggccaagttcccctcgacattcgcc
aagcgcaagacacaggcctactcggacagctcgcgcgcatcgcagacccgcaacctgcgc
actatcgactggaacccgctgggcacgctcatcgcgaccggctcgtccgaccgcaccctg
cgcgtgtggaaccccgaaaagccgcaggtcaagaactcgaccgagctgcgcggccacgcc
ggccccgtcgagcgcgtcgcctggaaccccacccgcgaggccgagctggcgagctgcagc
gccgatggcaccgtcaggttctgggacgtgaggagcaagaatgcggtaggaaaggtcgag
gtgggcggagacgcattcacgctggcgtggaggccggacggcagcgagctcgttgtggga
agaaaggccgaaaacctccaggacgatgtactcgtgccaatctctcgctcgacgttcacc
gcgcttccagcccaccggcagaccgtccagaccaaccagaccaccttctcgtggaccggc
caagagctcttcctcacaaccggagagggccaggtcaaaatcgttgactacccttccatg
aacatcctccacgtcctcaacgcccacacttcatcctgctactcggtcgacttctcccca
accgccgaatacctcgccatcggcggctcggacgcgctgatcacgctatgggacacgcgc
gactggatctgccagcgcacgcttaccagcatgacgggccccgtgcgcagcgtcagcttc
tccttcgacggctgctacgtggtcggcggctccgacgagggcgtcggcatggaggtcgcc
tacgtcgagacgggcgagtgcgtgcacaaggtcgagacgcccgcgccgaccccgtgcgtg
cagtggcaccctagccgctacgttctggcctactccgataccaccggcttgaagatcatt
ggcggtaccgagcgcttctga

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