Neofusicoccum parvum: UCRNP2_1441
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Entry
UCRNP2_1441 CDS
T03126
Name
(GenBank) putative translation repressor antiviral protein ski3 protein
KO
K12600
superkiller protein 3
Organism
npa
Neofusicoccum parvum
Pathway
npa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCRNP2_1441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_1441
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
UCRNP2_1441
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPIN90_LRD
TPR_22
TPR_1
TPR_2
TPR_19
TPR_16
TPR_14
TPR_11
TPR_CcmH_CycH
TPR_8
TPR_17
TPR_12
CFAP70_TPR_C
ARM_TT21_5th
CFAP70_mid_TPR
TPR_Slam
TPR_6
ARM_TT21_C
TPR_7
TPR_9
SpoIIE
Sid-5
Motif
Other DBs
NCBI-ProteinID:
EOD51784
LinkDB
All DBs
Position
Unknown
AA seq
1776 aa
AA seq
DB search
MEFEVSYSLDNADQFWEELDDIVSARYDSHEAIDNTLRSYLSFASNFHEEYLQSEEDIKQ
CACKLLGAPVFYKNKPYVRRQFVFCLLQEDEPPTLEIVAAVLLLDGLADVDDQQVFHMMK
KEGAFPRLVELIKTTNADEHKDLHRLLLQLVYEMSRIQRLAPEDIGVVDDAFVLCLFQTV
EELFGDPNDPFCYHVIRVLLVLNEQYFVANIPTPAVPLTNRVIKALSTHGHIYKTFGENM
ILLLNRETEASLTLLILKLLYLLFLNEKTCDYFYTNDLHVLIDIIIRNLLDLPSDDTASA
AIRHTYLRVLHPLLANSQVNRPPHYKPDELLKMLDYLSQTNDNPWRHFEANDETTIRLAK
RLNPPPAMAPSSTKAALKAAKAALDAQKWDDAIAQAEQVLESDPHNYFARLFLGRALDKK
GSPAAAATAYDAAAALKPDDDQAWLGLRSLYERLAAARVDEHTTVGLRLAEIYAAQDDAH
RAQIAVDKAVDLARAHGSKQQYKRALELYLPTSPVYGFLEGRVPHPAATYTRIADIVEAE
EKERVNKEIGERRTRLGARIGQVTTEVKREVYGQSPLEELYQSIVDWTGDDEVRRAYEEK
LLLRAYEVLAVLPSGKKDEKREQVVKLAHGMVIIKHPFALAWRIELEWRDVESFQEFDAN
VVREFVEFFPDDGLARVLKGYLTSEITPFPLKLPQEPKEEEEKKEEEEPPLSAEDRLLLM
TDGLDDAKQSTLAHRLMGEYYLHLEEVESSVEVTRKGLKLLTSEAQKSGLGFQNNKDAIN
SILATSLIQYQSPKNHPEAKSLFHDILKRKQTFTPALIGVGLILEEEEEYSEAIDFLSRA
LARDPENARIGAETAWCKALTGDHTMALSELESHLEKMKTTDPRSRELRALTLYRIGICI
WETDPTRQARKDRTGAYASFIQAIKTNPNLAPAYTSLGIFYQDYARDKKRARQCFQKAFE
LSASELEAAERLARSFADQGEWDIVEVIAQRAIDSGKCRPAPGSKKKKGVSWPFSAMGIV
QMNKQEYNKSVYSFLSALRISPDDYHSYVGLGESYHNSGRYNSALRTFRYAEDPTDGVQM
KKPAENWFTKYMLANVNRELGQYDEAIDGYKEVLETRPNEFGVQIALLQTLVERGWRQVE
TSFFGKAADSALEAIDVAKAVAEYKPEAFNLWKAVGDACSLFSWVQSRIKDLPFEKVKVL
LETDIDAKEFDLFSDNDGVGQAQLSSLSDQSEDATAPVQRCLESAILAQKRAIYACAHDI
HAQAVAWYNLGWTEYRTYVCCEQDVDPSKQGKKSLKLLKAAMRCFKRAIELEAGNAEFWN
ALGIVTTQLNPRVAQHSIVRSLHLNERNVKAWVNLGTLCLLQNDYELAHTAFARAQSTDP
DYAQAWLGEGLIALLWGDAKEALSHFTHAFEISDAASLVVKRQYAVSTFDHLLSSPAASN
DITKLIQPLFALQQLYSQKSTDIPHRHLAALYLERVGNFDAAIEALDEICTNAEAEFEVS
ESPEALSRFAQAKTDLARNRLAASDFSTASEDAETALDLTSEEGGGMSADTRRKVRLAAR
LTAGLSQYYLNDMDAAIDHFRTALQDSGSAPDVVCSLAEVLWAKGGAEEKNVARDQLFEC
VADHPDHVGAVVLLGAMASLDEDSDTMDAVRDDLQALRTRPDLDTHQLRRIEKVLDAIAS
LSSTGDQANVEVQTEIQTSIMLAPHQPHGWSQLADLVADGRKEEIGGDEEVFPAKMALVT
AKRAVPPHGPLSAEELAQAFAGAGTVADTQRAVISS
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgaggtgtcctacagcctcgataatgccgaccagttctgggaggagctggac
gacatcgtctccgcccgctacgactcgcacgaggccatagataacaccctgcgctcctac
ctgagcttcgcttccaacttccacgaggaatatctccaatccgaggaggacatcaagcag
tgcgcctgcaagctcctaggagccccggttttctacaagaacaagccttacgtgcggagg
cagttcgttttctgcctgcttcaggaggatgagccgcccacacttgagatcgttgcagcc
gtgctgctgctcgacggcctcgccgacgtcgacgaccagcaggtcttccacatgatgaag
aaagagggcgcttttccgcgcctcgttgagcttatcaaaaccaccaatgccgatgagcac
aaggacttgcaccggctgctgcttcagctcgtatacgaaatgtcgaggatacaacgactt
gcgccggaagatataggcgtggtcgacgatgcattcgtgctctgccttttccagaccgtc
gaggagctctttggcgacccgaacgatcctttctgctaccacgtcattcgtgttttgctg
gtattgaacgagcaatacttcgttgcgaacattccaaccccggccgtgccgctgacgaat
cgcgtcatcaaagctctttccacccatggccacatctacaagaccttcggagagaacatg
attttactgctgaaccgcgaaacggaggcttcacttactttgcttattctgaagctgctt
taccttcttttcctgaacgagaagacctgcgattacttttacaccaacgacttgcacgtc
ctcatcgacatcatcatccgcaatctgctggatttgccctcagacgacaccgcatctgca
gccattagacacacgtacttgcgcgtgctgcacccgctgctcgcaaacagccaggtcaac
cgtcctccgcattacaagccagacgagctactcaagatgctggattacctcagccagacg
aacgacaacccctggaggcatttcgaagccaacgacgagactacaattcgactggcaaaa
cggttgaacccccctcccgccatggccccctcctccaccaaggcggccctcaaagccgca
aaggcggcactggacgcccagaagtgggacgacgccatcgcccaggccgagcaggtgctg
gagtccgacccgcacaactacttcgccaggctgttcctcggccgcgcgctcgacaagaag
ggcagcccggccgcggccgcgacggcctacgacgccgccgccgcgctcaagcccgacgac
gaccaggcctggctgggcctgcgcagcctgtacgagcgcctggccgccgccagggtcgac
gagcacaccaccgtcggcctccgcctggcagagatatacgccgcgcaggacgacgcgcac
cgcgcccagatcgccgtcgacaaggccgtcgacctcgctcgcgcccatggctcgaagcag
cagtacaagcgcgctctcgagctgtacctccccaccagcccggtctatggcttcctggaa
ggtcgtgtcccgcacccggcggcgacgtacacgcgcatcgcggatatcgtcgaggcggag
gagaaggagcgcgtcaataaggagatcggcgagcggcggacaagactgggcgcgcgtatc
ggacaggttaccacagaggttaagcgcgaggtgtatggccagagtccgctggaggagctg
tatcagagtattgtggattggacgggtgatgatgaggtgaggagggcgtatgaggagaag
ctgctgctgcgcgcgtacgaggtgctggccgtgctgccgagtgggaagaaggatgagaag
cgcgagcaggttgtgaagttggcgcatgggatggtcatcattaagcatccgtttgcgttg
gcgtggcgaattgagctggagtggagggatgtggagtcgttccaggagtttgacgccaat
gtggtgcgggagtttgtcgagttcttcccggatgatggccttgcgagggtgttgaaggga
tatttgacgagcgagatcacgccgttcccgttgaagctgccccaggagccgaaggaagag
gaagagaaaaaggaagaggaggagccgccgttgagtgcagaggataggctcctgctcatg
acggatggtctcgatgatgcgaagcagtcgaccctggcgcaccggctcatgggtgagtac
tatctgcatttggaggaagtcgagagctcggtcgaggttacccgaaagggacttaagctc
ctgacttccgaagcgcagaagtcgggactggggttccagaacaacaaagacgccatcaac
agcatcctcgctacgtcgctcattcagtaccagtctcccaagaatcacccagaggccaag
tccctgtttcacgacatcctcaagcgcaagcagacgttcactccggctctcattggtgtt
ggccttattctcgaagaagaggaagagtactctgaggccatagacttcttgagcagagct
cttgctcgggatcctgaaaacgctcgcatcggagctgagaccgcctggtgcaaggctctg
acaggcgaccacactatggctttgagcgagcttgaaagccacctcgagaagatgaagacc
accgatcccagatctcgcgaactgagagcgctgacattgtaccgcattggtatatgcata
tgggagactgaccccacacgacaggctcggaaagacagaaccggtgcctatgccagcttc
atacaggccatcaagacgaacccaaatcttgcaccggcctacactagccttggaatcttc
taccaggactacgctcgggataagaaacgcgcacggcaatgcttccaaaaggcttttgag
ttgtctgcatctgagctggaggctgctgaacgtcttgcacgctctttcgcagaccaaggc
gaatgggacattgtcgaagtcattgctcaacgcgctatcgattctggaaaatgccgcccc
gccccaggatcgaaaaagaagaagggtgtcagctggccattctccgccatgggaattgtt
caaatgaacaagcaggagtacaacaagagcgtttactctttcctctccgctctcaggatc
agcccggacgattaccactcctacgtcggtctgggcgagagctaccacaattctggcagg
tacaactctgcactcaggacgttccggtatgcggaggaccctaccgatggagttcagatg
aagaagcctgccgagaactggttcacgaagtacatgcttgcgaacgtgaatcgggaactt
ggccagtatgacgaggccatcgatggatacaaggaagtgctggagacaaggcccaacgag
ttcggtgttcagattgccctactacagactctggtcgagagaggctggcggcaggtcgag
accagcttcttcggcaaggcggccgatagtgctctagaggccattgacgtcgccaaggcc
gtagccgagtacaagccagaagctttcaacctctggaaggctgtcggtgatgcatgctca
ttattcagctgggttcaaagccgaatcaaagacctgcctttcgagaaggtgaaggtcctg
ttggagaccgacatcgacgccaaggaatttgacctcttctcagataatgacggtgtcgga
caagcccagctgtcatctctatcagatcagtcagaggatgcgacagctccagtccaaaga
tgtcttgaatctgccattctcgcgcagaagcgggctatctatgcctgtgctcacgatatt
catgcgcaagcagttgcatggtacaacttgggttggacggaataccgaacttacgtgtgc
tgcgagcaagacgttgatccctccaaacagggcaagaagagcttgaagttgctcaaggcc
gcgatgagatgtttcaagcgggcgattgagctcgaggcgggcaatgctgaattctggaac
gctctcggcattgttaccactcagctcaacccgagggtggctcagcactccattgtcaga
agcttgcatcttaacgagaggaacgtcaaggcatgggtgaatcttggcactctctgcctc
cttcagaacgactacgagcttgcccacacggcctttgcacgtgctcagtctacggatccc
gattatgcccaggcttggctgggtgaagggctcattgcactcctgtggggagatgcgaaa
gaggccttgtcccatttcacacatgctttcgagattagtgacgcagcttctcttgttgtg
aagcggcagtacgcagtctcgacttttgatcacctcctatcttctccagcagcctcaaac
gacatcaccaaactgatacagccacttttcgccctccagcagctttattctcagaaatcg
acggatatcccccaccgccacctcgcagctctctatcttgagcgggtgggcaacttcgat
gcagcaatcgaggcgctcgatgagatttgcaccaatgctgaggcggagttcgaagtctca
gaatcaccggaggctctctcacggttcgcacaagcaaagaccgaccttgctcgtaaccga
cttgcagcatcagacttctcgacagcgtcagaagatgccgagacggcgctggacctcaca
tcagaagaaggcggcggcatgagcgccgacacacggcgcaaagtccgccttgcggcacgc
ctcacggccggcctatcacagtactacctcaacgatatggacgccgccatcgaccacttc
cgcactgcacttcaagatagcggctcggctcccgacgtcgtctgctccctcgcagaggtg
ctgtgggcgaagggcggtgccgaagagaaaaacgtcgcccgcgaccagctcttcgagtgc
gtggcggatcatcccgaccacgtcggcgcagtggtgctactcggcgccatggcgagtctg
gacgaggacagtgacaccatggacgcagtcagggatgacctccaggctctgcgcacgcgt
ccggatctcgacacccaccaactccgccgcatcgagaaagtactggacgccattgcctcc
ctctccagcacaggggaccaggcgaacgtcgaggttcagacggagatccaaaccagcatc
atgcttgccccgcaccagcctcacgggtggtcgcagctcgcggacctcgtggcggacggc
cgcaaagaggagataggcggtgatgaagaggtcttcccggccaagatggcgctggtcaca
gcgaagagggctgttccgccccatggaccgctcagtgcggaggagttggcgcaggcgttt
gcgggcgcggggacggtggcggatacgcagagggcggtcatatcatcatga
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integrated database retrieval system
