Neofusicoccum parvum: UCRNP2_1503
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Entry
UCRNP2_1503 CDS
T03126
Name
(GenBank) putative pre-mrna-splicing factor rse1 protein
KO
K12830
splicing factor 3B subunit 3
Organism
npa
Neofusicoccum parvum
Pathway
npa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRNP2_1503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npa03021
]
UCRNP2_1503
03041 Spliceosome [BR:
npa03041
]
UCRNP2_1503
03036 Chromosome and associated proteins [BR:
npa03036
]
UCRNP2_1503
Transcription machinery [BR:
npa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
UCRNP2_1503
Spliceosome [BR:
npa03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
UCRNP2_1503
Complex B
UCRNP2_1503
Complex C
U2 SnRNP specific factors
UCRNP2_1503
Chromosome and associated proteins [BR:
npa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
UCRNP2_1503
TFTC complex
UCRNP2_1503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
Tobravirus_2B
Motif
Other DBs
NCBI-ProteinID:
EOD51708
UniProt:
R1EV80
LinkDB
All DBs
Position
Unknown
AA seq
1201 aa
AA seq
DB search
MATTSNLFMYSLTIQPPTAVHQAILGQFAGTKEQQIITACGSRLILHRADAQAQRITPVL
THDVFGIIRALAAFRLAGSSKGRIAILEYNSTKNIFVQLKLETFGKSGVRRVVPGQYVAT
DPKGRACMIASIEKNKLVYVLNRDSNAHLTISSPLEAHKPQTFVFSLIGLDVGYENPIFA
ALEIDYDDVDQDHTGEVAANKQKELVYYELDLGLNHVVRKWSDAVDRTANMLFQVPGGQD
GPSGVLVCGEESITYRHINQEAFRVPIPRRKGATENPQRKRFITAGVMHKMRGAFFFLLQ
TEDGDLFKVTIDMVEDEEGQPTGDVNRLKIKYFDTVPVATSLCILKSGYLFVTAESGNHH
FYQFEKLGDDDEELEFFSDDFSPDADVPYEPVFFHPRGAENISLAQSAPSMNPTLGCKVA
NLTDDDAPQIYTISGTGARSSFKSLKHGLEVSEIVESELPSVPEAVWTTKIRKDDEYDAY
IILSFSNGTLVLSIGETVEEVTDTGFLSSTRTLAVQLLGEDALIQVHPRGIRHIQAGGRI
NEWPAPQHRTIVAATTNERQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMSGTVTCLSLG
EVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAMADSSSGGS
TLYLHIGLYSGVYLRTVIDEITGELTDTRTRFLGAKAVKLFRVTVQDQSAILATSSRSWL
GYSDQQTKAFTLTPLAYAPLEWGWSFNSEQCTQGMVGIQGQHLRIFTIENLSTNLLFENI
PLMHTPRNLVRHPTEPLFYVIESDNNTLSSATRQQLLNDPATVNGDAKILPPEEFGYPKG
NGHWASCIQVVDPISSKEVVYTLELQENESAVSVALAPFQSQNDETFLVVGTAKDLVVSP
RSYSCGYVHIYRLLENGRELEFIHKTKTEAPPMALLPFQGKILVAVSADLRLYDLGLRQL
LRKAQALNVVPNILIGLQTQGSRIVCSDVQESVTYVVYKHLENRLIPFCDDNIHRWTTCT
TMVDYETTAGGDKFGNIWLVRCPPKTSEEADEEGAGLHLINERPYLQGTPNRLDLLAHFY
TQDIPTSIQKTALVAGGRELLLWSGLQGTLGIFIPFVGREDVDFFQSLEQQLRTEDPPIA
GRDHLAFRSYYVPVKGVIDGDLCERFLRLPRDKKESIAAELDRSVREVERKIGDQRTRFA
Y
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacctccaacctgttcatgtactccttgaccatccagccgcccaccgccgtg
caccaggcaatcctcggccaatttgctggaaccaaggagcagcagatcatcaccgcctgc
ggctcgcggcttatcctgcaccgcgccgacgcccaggcccagaggattacgcctgtcctc
acccacgatgtcttcggcatcatccgcgccctggccgccttcaggctggcgggctcgtcc
aaaggccgcatcgccatcctcgaatacaattccaccaagaacatcttcgtccagctgaag
ctcgagaccttcggcaagtcgggcgtccgccgcgtggtccctggccagtacgtcgccacc
gaccccaagggccgcgcgtgtatgatcgcctctatcgagaagaacaagctcgtctacgtc
ctgaaccgcgattccaacgcacatctgaccatttcctcgccgctcgaggctcacaaaccg
cagactttcgtcttttccctcattggtctggatgtcggatacgagaacccaatcttcgcc
gcgctggagatcgactatgatgacgtggaccaggatcacaccggcgaagtggctgcgaac
aagcagaaggagctggtctactatgagctggaccttggtctgaaccacgtcgtgcgtaag
tggtctgatgccgttgatcggactgcgaacatgctctttcaagttcccggaggtcaggat
ggtcccagcggtgtccttgtctgcggcgaggagagcatcacctaccgtcacatcaaccag
gaggctttccgtgtcccaattcctcgccgcaaaggcgcaacggagaatccacagaggaag
cgtttcattaccgctggtgtcatgcacaagatgcgcggcgctttcttcttcctgctgcaa
acagaggacggtgatcttttcaaggtgaccattgacatggttgaggacgaagaaggccag
cctacgggtgacgtcaacaggcttaagatcaagtacttcgatactgttcctgtggccact
agcctctgcatcttgaagagcggatacctgttcgttactgccgaatctggaaaccatcac
ttctatcagttcgagaagttgggcgatgacgacgaggagttggagttcttcagcgacgac
ttcagtccagatgccgatgtgccatatgagccagtcttcttccatccccggggcgcggag
aacattagcttggcccaaagtgccccgagcatgaacccgaccctcggttgcaaagtcgcg
aatctcactgatgatgatgcgccccagatttatactatttccggtactggcgcccgcagc
tcattcaagtctttgaaacacggcttggaagtctctgaaatcgtggagtcagaactgcct
agtgtccctgaggcagtctggacgaccaagatccggaaggacgacgagtatgacgcctat
atcattctctctttctccaacggtaccctcgttctcagcatcggcgagaccgttgaggaa
gtcacagataccggatttctatcgtctactcgcacgcttgctgtgcaacttctaggcgag
gatgccctcatccaggtccacccgagaggcatccgtcacattcaggcgggtggtcgcatc
aacgagtggcctgcacctcaacacagaactatcgtcgctgctaccacgaatgaacgtcaa
gttgccgttgcgctgagttctggcgaaatcgtctacttcgagatggattcggatggatct
ctggccgaatacgacgagaagaaggagatgagtggtactgttacgtgcttgagtttgggc
gaggtgccggagggcagagttcgcagctccttccttgcggtcggctgcgacgactccacc
gtccgtattctcagcttggatccagattctactcttgagaacaaatcggtccaggccctg
acctccgcgccttcagcgctgagcatcatggcgatggctgattcgtcttccggtggctct
actctgtacttgcacattggcctctattcaggtgtctacctacgcaccgttattgacgag
atcactggagagctcactgacactcgcactcgtttcctgggcgccaaagctgtcaagcta
ttccgggtcactgtccaagaccagagtgccatcctggcaacaagttcccgttcttggctt
ggctactctgatcagcaaaccaaggcatttactcttactccgctggcgtacgcgcctcta
gagtggggctggagcttcaacagcgaacagtgcacgcaaggcatggttggtatccaggga
caacaccttcgcatcttcaccatcgaaaacctctccacaaacctcctttttgagaacatt
cctctcatgcatacccctcgtaatcttgtccgccaccctaccgagcctctgttctatgtc
attgagtcggacaacaacactctttcgtcggccacccgccaacaacttctcaacgacccc
gccaccgtcaacggagacgcgaagattcttcctccggaagaattcggctatcccaagggc
aacggtcactgggcttcatgcatccaggtcgttgatcctatcagcagcaaagaggttgtt
tacacgctggagttgcaggaaaacgaatctgctgtcagcgtcgccctcgctccgtttcaa
tcccagaacgatgaaacattcctggtggttggtactgctaaggatcttgtcgtgtcacca
aggtcatattcgtgtggttacgtccatatctaccgtctgctggagaatggccgcgagctc
gaattcattcataagacaaagacggaggctcctcccatggctctgctgcctttccagggt
aagattttggttgccgttagcgctgacctgcggctgtacgaccttggtctccgccagctt
ttgcgcaaggctcaggctcttaatgtcgtgccgaacattctcattggtctccaaacccaa
ggcagtcgcattgtttgctccgatgtccaggagtctgttacatacgttgtctacaagcat
cttgagaaccggctgatccccttctgcgacgacaacattcaccggtggaccacttgcaca
accatggtcgactacgagacaaccgctggtggcgataagttcggcaacatctggcttgtc
cgttgtccacccaagacctcggaggaggctgatgaggagggtgctggtctacacctcatc
aacgagcggccctatcttcagggcacacccaaccgtcttgacctgctggcacacttctac
acccaagatatccctacctcgattcaaaagacggcacttgttgctggtggtcgcgaactc
ttattatggagcggcctgcagggtactctaggtatcttcatccccttcgttggtcgcgag
gatgtagacttcttccagagcctggagcagcagttgcgcacggaagaccctccaatcgct
ggaagggaccatctcgcgttcaggagttattacgtaccggtcaagggcgtcatcgacggc
gatctttgtgagaggttcctccgactgccgagggacaagaaggagtcgattgcggctgag
ctggaccgaagcgtgagggaggtggagagaaagattggcgaccagaggacgcgcttcgca
tactag
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