KEGG   Neofusicoccum parvum: UCRNP2_1514
Entry
UCRNP2_1514       CDS       T03126                                 
Name
(GenBank) putative pab-dependent poly -specific ribonuclease subunit pan3 protein
  KO
K12572  PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
npa  Neofusicoccum parvum
Pathway
npa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:npa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    UCRNP2_1514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npa03019]
    UCRNP2_1514
Messenger RNA biogenesis [BR:npa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     UCRNP2_1514
  mRNA degradation factors
   3'-5' decay
    Pan complex
     UCRNP2_1514
SSDB
Motif
Pfam: Pan3_PK Pkinase
Other DBs
NCBI-ProteinID: EOD51726
UniProt: R1GTW1
LinkDB
Position
Unknown
AA seq 633 aa
MDGLYYNPKGNILCRNVTIYGHCRHEHNGCVFQHDPSKITGAQAENVKKRFNVDSPSFTP
LQPSTNGVTSSPRQTTISPKAANAAIFTPKSSVKASLAVHAKETTPEWHAHDFQEFVPQG
YDVQGDSAVQAAALNPYDTFAASSAMGGMSPANHPAQLNPYSQDPSAMGGAAFFQNTAGF
TQPIQYHLYAPMGPHSENLLAYQKTTHDFFIPDHLREDLQRKSEATRQILPNSSLPSAVD
HFHSLVPLDTNNQKNASLFGYPTWVYKAVSSKDGLTYTLRRLEGYRLTSEQAIFSVRPWK
RIDNGSIVAIHDAFTTRAFGDSSLIFVTDYHPLSKTLSEQHLNVAPRGYHNRANPHTVPE
AVIWGYIVQIASALKAIHGNNLAARLIHPSKILVTSKNRIRLNSCAILDLLNFDNNRAIQ
ELQQEDFQQLGRLVITIASNNSINPVNVQKALDILSRSYSKDLIDCVSWLLSPAPAAPGI
QTPGVPSKDITTFIRSISDKMTILLDNTFHAEDTLTSNLGRELENGRLVRLMAKLNFINE
RPEFESNPQWSETGERYYLKLFRDYVFHQVDGNGHPVVDLGHVISCLNKLDVGSDEKISL
VSRDEQNVLVVSYREVKRGVEQTFNELVKPKRR
NT seq 1902 nt   +upstreamnt  +downstreamnt
atggatgggctttactacaatcccaagggcaacattctctgccgcaacgtcaccatctac
ggccattgccgccacgagcacaatggctgcgtcttccagcacgatccctccaagataacc
ggcgcccaggccgagaacgtcaagaagcgcttcaacgtcgactccccatcattcaccccc
ctccagccgtccaccaacggcgtcacctcgtcgcctcgccaaaccaccatatctcccaag
gctgcaaatgccgccatcttcacccccaagtcgtcggtcaaggccagcctggccgtccat
gcgaaggaaacgacacctgagtggcacgcgcacgacttccaggagttcgtgccgcagggc
tatgatgttcagggcgacagcgctgtccaagctgcggccttgaacccgtacgataccttt
gcagcatcctctgccatgggcggcatgagtcccgccaaccatcccgcccagctcaatcct
tactcgcaagacccgtccgccatgggtggcgccgccttcttccagaatactgccggattc
acccaacctattcaatatcacctttacgcacccatgggcccacactctgagaatctactg
gcttatcagaagaccacccacgactttttcattcctgaccaccttcgagaggacttgcag
cgcaagtcggaggcaacgcgccagattctgccgaactcttctctgcccagtgctgttgac
cacttccactctcttgttcctttggacacaaacaaccagaagaatgcttctctttttgga
tacccaacttgggtctacaaggcggtgtcgagcaaagacggtcttacctacacgctccgc
aggcttgaaggatatcgcctgaccagcgagcaggcgatcttctccgtaaggccctggaag
cgcattgataacggaagtattgtggctatccacgatgcattcactacccgagcattcggc
gacagttcgctcatcttcgtaaccgactatcatcccctctccaagacgctttcggagcag
catctgaatgttgctccccgcggatatcacaaccgtgccaacccgcacacggttccggaa
gccgtgatctggggatacattgtacagatcgcgtctgcattgaaggcgatccacggcaac
aaccttgcggcaaggctgattcaccccagcaagattctggtcacgtcgaagaaccggatc
cgcctcaacagctgtgcgatcctagatttgctcaactttgataacaatcgcgcgattcag
gaacttcagcaggaggactttcagcagctggggcgcctcgtcatcaccatagcaagcaac
aactcgatcaacccagtcaatgtgcagaaggcgttggacatactttctcgcagctacagt
aaggatctcatcgactgcgtttcatggcttctcagccctgctccggcggcgccaggaatc
cagacgccgggagtcccttccaaagacattactacattcattcggtctatttcggacaag
atgaccattcttctcgataatacgtttcatgctgaggacaccctgacttcgaatctcgga
cgggagcttgagaacggccgtctcgtccggctgatggcgaagctcaacttcatcaacgag
cgcccggagtttgagagcaatcctcaatggtcagagaccggcgagcggtactacctcaag
cttttcagagattacgttttccaccaggtggatggaaacgggcacccggtcgtcgacctc
ggacatgtgattagctgtctcaacaagctggacgtgggcagcgatgagaaaatctcattg
gtgagcagggatgagcagaatgtgctcgtggtcagttacagggaggtcaagcgaggtgtg
gagcagactttcaacgagttggtcaaacctaagaggagataa

DBGET integrated database retrieval system