Neofusicoccum parvum: UCRNP2_1514
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Entry
UCRNP2_1514 CDS
T03126
Name
(GenBank) putative pab-dependent poly -specific ribonuclease subunit pan3 protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
npa
Neofusicoccum parvum
Pathway
npa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCRNP2_1514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_1514
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UCRNP2_1514
mRNA degradation factors
3'-5' decay
Pan complex
UCRNP2_1514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-ProteinID:
EOD51726
UniProt:
R1GTW1
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MDGLYYNPKGNILCRNVTIYGHCRHEHNGCVFQHDPSKITGAQAENVKKRFNVDSPSFTP
LQPSTNGVTSSPRQTTISPKAANAAIFTPKSSVKASLAVHAKETTPEWHAHDFQEFVPQG
YDVQGDSAVQAAALNPYDTFAASSAMGGMSPANHPAQLNPYSQDPSAMGGAAFFQNTAGF
TQPIQYHLYAPMGPHSENLLAYQKTTHDFFIPDHLREDLQRKSEATRQILPNSSLPSAVD
HFHSLVPLDTNNQKNASLFGYPTWVYKAVSSKDGLTYTLRRLEGYRLTSEQAIFSVRPWK
RIDNGSIVAIHDAFTTRAFGDSSLIFVTDYHPLSKTLSEQHLNVAPRGYHNRANPHTVPE
AVIWGYIVQIASALKAIHGNNLAARLIHPSKILVTSKNRIRLNSCAILDLLNFDNNRAIQ
ELQQEDFQQLGRLVITIASNNSINPVNVQKALDILSRSYSKDLIDCVSWLLSPAPAAPGI
QTPGVPSKDITTFIRSISDKMTILLDNTFHAEDTLTSNLGRELENGRLVRLMAKLNFINE
RPEFESNPQWSETGERYYLKLFRDYVFHQVDGNGHPVVDLGHVISCLNKLDVGSDEKISL
VSRDEQNVLVVSYREVKRGVEQTFNELVKPKRR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggatgggctttactacaatcccaagggcaacattctctgccgcaacgtcaccatctac
ggccattgccgccacgagcacaatggctgcgtcttccagcacgatccctccaagataacc
ggcgcccaggccgagaacgtcaagaagcgcttcaacgtcgactccccatcattcaccccc
ctccagccgtccaccaacggcgtcacctcgtcgcctcgccaaaccaccatatctcccaag
gctgcaaatgccgccatcttcacccccaagtcgtcggtcaaggccagcctggccgtccat
gcgaaggaaacgacacctgagtggcacgcgcacgacttccaggagttcgtgccgcagggc
tatgatgttcagggcgacagcgctgtccaagctgcggccttgaacccgtacgataccttt
gcagcatcctctgccatgggcggcatgagtcccgccaaccatcccgcccagctcaatcct
tactcgcaagacccgtccgccatgggtggcgccgccttcttccagaatactgccggattc
acccaacctattcaatatcacctttacgcacccatgggcccacactctgagaatctactg
gcttatcagaagaccacccacgactttttcattcctgaccaccttcgagaggacttgcag
cgcaagtcggaggcaacgcgccagattctgccgaactcttctctgcccagtgctgttgac
cacttccactctcttgttcctttggacacaaacaaccagaagaatgcttctctttttgga
tacccaacttgggtctacaaggcggtgtcgagcaaagacggtcttacctacacgctccgc
aggcttgaaggatatcgcctgaccagcgagcaggcgatcttctccgtaaggccctggaag
cgcattgataacggaagtattgtggctatccacgatgcattcactacccgagcattcggc
gacagttcgctcatcttcgtaaccgactatcatcccctctccaagacgctttcggagcag
catctgaatgttgctccccgcggatatcacaaccgtgccaacccgcacacggttccggaa
gccgtgatctggggatacattgtacagatcgcgtctgcattgaaggcgatccacggcaac
aaccttgcggcaaggctgattcaccccagcaagattctggtcacgtcgaagaaccggatc
cgcctcaacagctgtgcgatcctagatttgctcaactttgataacaatcgcgcgattcag
gaacttcagcaggaggactttcagcagctggggcgcctcgtcatcaccatagcaagcaac
aactcgatcaacccagtcaatgtgcagaaggcgttggacatactttctcgcagctacagt
aaggatctcatcgactgcgtttcatggcttctcagccctgctccggcggcgccaggaatc
cagacgccgggagtcccttccaaagacattactacattcattcggtctatttcggacaag
atgaccattcttctcgataatacgtttcatgctgaggacaccctgacttcgaatctcgga
cgggagcttgagaacggccgtctcgtccggctgatggcgaagctcaacttcatcaacgag
cgcccggagtttgagagcaatcctcaatggtcagagaccggcgagcggtactacctcaag
cttttcagagattacgttttccaccaggtggatggaaacgggcacccggtcgtcgacctc
ggacatgtgattagctgtctcaacaagctggacgtgggcagcgatgagaaaatctcattg
gtgagcagggatgagcagaatgtgctcgtggtcagttacagggaggtcaagcgaggtgtg
gagcagactttcaacgagttggtcaaacctaagaggagataa
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