Neofusicoccum parvum: UCRNP2_1540
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Entry
UCRNP2_1540 CDS
T03126
Name
(GenBank) putative eukaryotic translation initiation factor 3 subunit clu1 protein
KO
K03255
protein TIF31
Organism
npa
Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
npa03012
]
UCRNP2_1540
Translation factors [BR:
npa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
UCRNP2_1540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_10
TPR_12
CLU_N
GSKIP_dom
TPR_NPHP3
TPR_8
TPR_MalT
Hep_59
UPF1_1B_dom
Motif
Other DBs
NCBI-ProteinID:
EOD51664
UniProt:
R1GZX1
LinkDB
All DBs
Position
Unknown
AA seq
1258 aa
AA seq
DB search
MAQTNDASTPAKAEPTTADKNVNGDAVAGQDGEQEQADDNAQPVDNVFTLNVKLPHKPFQ
FQVIATTQEQVQDLRQSIIDSPHTFQYSCFHLEHNGERINDFVELSEVPGIGPDAEIKLV
EDPYTEKEARMHFIRAGVSLLHDVTEKIATEEKTAKADSTPLDGYSFDAAGTVKTVLPQP
QDAAPKTVKAISLSPWNPPPYHLRSKGHLLYLQVTTNEGEQYQVTSHVSGFYVNRSTNQK
FDPFPRAAPKDIAAHSLLTLVSKLSPSFEESFQELLEYNNAKDPLAMFQLSNAIPASPWL
VSPPSSVANSHQADITRTQENYLISGLESADNLRDWNEEFQSTRELPRETVQDRVFRERL
TSKLFADYNEAAVRGAVLVARGEVAPLNPTEAKDAQIFVWNNIFFSFGADGVGTFATDGG
DEAARVATGKDVMGVKAVNQLDITGLFTPGTVVVDYLGKRIVGQSIVPGIFKQREPGEHQ
IDYGGVEGKDVVAENEAFAPLFEQLSKALRVKKHAVWDKEDKRHDLEGSVETKGLLGTDG
RKYALDLYRISPLDVTWLEQYWQEPTEDGKPKDKERDYPHRMAVLRPELVESYGRVKLRE
YIKAELAKRAEAKEAAQKDEKTEEKAADSEAQKKETENERVDISGFQFALNPDVFCGQVP
QTEEEKEEYAKDEAEVRAACEHLSSEVIPRLIHDLQEGDVGFPMDGQSLTSLFHKRGINL
RYLGKIATLADKEDPRLKALKRLAIQEMIARGFKHVANEKLRYLPSPFSGACVAHLLNCL
LGAEVNTSPAAEVDASLKALYADADFSFESVKPETLKTAIIDQVKQRFRFDLGENWIESG
KQLQVLREVSLKLGLQLEAKNYAFTKEQAKVSDSESSDSGLKPTTNGHASGSSKNKKKKG
ADRSPARTASPAAPAQTLTFRADDVQNIVPVVKEASPKSVLAEEALEAGRISIAQDQKEL
GNELLLESLSLHEQIYGVLHPEVARVYHQLSTLFYGLEEKNAAVELAHKAVIVSERTLGV
DSSETVLAYLNLGLFEHANGNTKAALGYVRHALDLWKVIYGNKHPDSITTINNAAVMLQT
MKQYHESRQWFEACLAISEEVSGKQSINTATLLFQLSQALALDKDMHAAVNRMRESFNIF
NTILGPNDRNTKEAESWLEQLTQSAVSHAKQIRDVQAGRLRRIPLTPRTNLRPQPSVGQT
VSEATGAPSSSAEEGGVDMHTKSIEELVRYIEGDGPKKSTPKKKQQKAPRRPGRAGGN
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaccaatgacgcctcgactccagcaaaggctgagccgacgaccgcggacaag
aacgtgaacggagatgcagttgccggccaggacggagagcaggagcaggcggacgacaat
gctcagcctgttgacaacgtcttcaccctcaacgtcaagctaccacacaagccgttccag
ttccaagtgatcgcaacgacgcaagagcaagtgcaggatctccgccagtccatcatcgat
tcgccgcacaccttccagtactcctgcttccacctcgagcacaacggcgaacgcatcaat
gacttcgtcgaactctctgaagttcccggtatcggcccggacgccgagattaagttggtg
gaggacccatacactgagaaggaggccaggatgcacttcatccgggccggcgtgtcgctc
cttcacgatgtgacggagaagattgccaccgaggagaagaccgccaaagcggacagcacg
cctctggatggctatagcttcgatgcggctggcacggtcaagactgtgttgccccagccc
caggatgcggcgcccaagactgtcaaggccatctcgctatcaccttggaaccccccgcct
taccaccttcgttcgaagggccacctcctctacctccaggtcaccaccaacgagggcgag
cagtatcaggtcacgtcgcacgtctctggcttctacgtaaacaggtcgacgaaccagaag
ttcgacccgttccccagggcagcaccgaaggacatcgcggcgcactcgttgctcaccctg
gtttctaagctgtctccgtctttcgaggaatctttccaggaattgctggagtacaacaac
gccaaagatcctcttgccatgttccagctctcgaacgccattcctgccagcccatggctc
gtctcgccgccctcgagcgttgcgaacagccaccaggctgacatcacccgcactcaggag
aactacctcatctccggtctggagagcgcagacaacctcagagattggaatgaggagttc
cagtccactcgggaactgccccgagagactgtgcaagaccgcgttttccgtgagagattg
acttccaagctcttcgcggactacaacgaagcggctgtgcgtggcgcggttctcgttgca
aggggcgaagtcgcgcctctgaacccgactgaggccaaggatgcccagatctttgtctgg
aacaacatcttcttctccttcggtgcggacggcgttggtacctttgctactgacggaggt
gatgaggcagcgcgcgttgcgactggaaaggacgttatgggcgtcaaggccgtgaaccag
cttgacatcaccggcctgttcacccctggcaccgttgtcgttgactacctgggtaagcgc
attgtgggacagagcattgttcccggcatcttcaagcagagggagcccggcgagcaccag
atcgactacggtggagttgaaggcaaggacgtcgtcgccgagaacgaggcctttgctccc
ctgttcgagcagctttccaaggccctgcgcgtcaagaagcacgctgtctgggacaaggag
gacaagcgtcacgacttggagggcagtgtcgagaccaagggtcttcttggaactgatggc
aggaagtacgctcttgatctttacaggattagccctctggatgttacctggctcgagcag
tactggcaggagcccaccgaggacggcaagcctaaggacaaggagagggactacccgcac
aggatggctgttctcaggcccgagcttgtcgagtcttacggccgcgtgaagcttagggag
tacatcaaggctgagctcgccaagcgcgctgaggccaaggaggcggctcagaaggatgag
aagaccgaggagaaggccgctgacagcgaggctcagaagaaggagactgaaaacgagcgt
gtggacatctccggcttccaatttgctctcaaccccgatgttttctgcggacaagttcct
cagactgaggaggagaaggaagagtatgcgaaggatgaggccgaggttcgtgccgcatgc
gagcacctcagctcagaggtcatcccgcgcctgatccacgatcttcaggagggtgatgtt
ggtttccctatggacggccaatctctcaccagtctgttccacaagcgtggtatcaacttg
aggtatctcggaaagatcgcgaccctggcggacaaggaggatcccaggctcaaggccttg
aagcgcctcgcaatacaggagatgattgctcgtggcttcaagcacgtcgccaacgagaag
ctccgctaccttccctcgccattctccggcgcttgcgttgcgcaccttctgaactgtctg
ctcggtgcagaggtcaacaccagcccggccgctgaggttgacgcatccttgaaggcgttg
tacgctgatgccgatttcagcttcgagtccgtgaagccggaaactctcaagactgccatc
atcgatcaggtcaagcagcgtttccgctttgacttaggcgagaactggatcgagtctggc
aaacagcttcaggtgctccgcgaagtgtccttgaagctcggtctgcagctcgaggctaag
aactatgctttcaccaaggagcaggccaaggtttccgactctgagtcctctgattctggc
ttgaagcccaccaccaatggccatgcctctggttctagcaagaacaagaagaagaagggt
gccgaccgttctccggcccgtactgcttctcctgcggctcccgcgcagacgctcaccttc
cgtgccgatgatgtccagaacattgttcctgtcgtcaaggaggcctcgcccaagagtgtt
ctcgccgaagaagccctcgaggcgggtcgtatctcgatcgcgcaggaccagaaggagctt
ggaaacgagctcctcctcgagtctctgtctttgcacgagcagatctatggcgttcttcac
ccagaagtcgctcgcgtctaccaccagctttctacccttttctacggcttggaggagaag
aacgctgccgtggagctggctcacaaggctgtcatcgtctcggagcgcacgctcggtgtc
gactcgtctgagacggtcctggcctatctgaaccttggcctgttcgagcacgccaacggt
aacaccaaggcggcgctcggctacgtccgtcatgccctggacctttggaaggtcatctac
ggcaacaagcaccctgattccatcacgaccatcaacaacgctgccgtcatgctccagacg
atgaagcagtaccacgagtcgcgccagtggttcgaggcttgccttgccattagcgaggag
gtttccggcaagcagtcgatcaacacggccacgctcctcttccagctgtcgcaagctctt
gccctggacaaggacatgcacgcggccgtcaaccgcatgcgtgagtcgttcaacatcttc
aacacgattctcggccccaacgaccgcaacaccaaggaggccgagtcgtggctcgagcag
ctcacgcagagcgccgtctcgcacgccaagcagattcgtgatgtgcaggctggtcgtctg
cgccgtatcccgctcacgccgcgcaccaacctgcgcccacagccgagcgtcggtcagacg
gtttccgaggctacgggtgccccatcttccagcgccgaagaaggcggggttgacatgcac
acgaagagcattgaggagcttgtccgctacattgagggtgacggcccgaagaagagcacg
ccgaagaagaagcagcagaaggcgcctcggagaccaggccgtgcgggcggtaactaa
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