Neofusicoccum parvum: UCRNP2_1573
Help
Entry
UCRNP2_1573 CDS
T03126
Name
(GenBank) putative rhamnogalacturonan lyase protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
npa
Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
UCRNP2_1573
Enzymes [BR:
npa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
UCRNP2_1573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3_3
CBM-like
Motif
Other DBs
NCBI-ProteinID:
EOD51655
UniProt:
R1GJ02
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MATPGLLRALSSLLLALLVFSRDVLAVLNVNETSTNIFIENDRLYLALDKSKGVIVDLAL
DEQDLLGPVSGSTGIGPYLDCYCTPSGFYTPGSIAPQYQIFQDVDSAGVPYAGVVMGETY
PATGQVLEFYYFVREGETGIHTFSRLTYFNETTPFLRNLQEFRTLFRPNTALWTHLSTNE
KTYAPLPSKDAVANEVVVQDATWYLGNTPEDQYVQQWADYFTKYTFQAQWRDHRVHGMYS
DGSTSTTNATFGVWMVMNTVDTYFNGPKNSDLTVDGIVYNYIASNHHGNGTPNITNGFDR
TFGPFYYHFNSGKPGTSLQALREDALQYADPSWNAQFYDDIAEHVPNYVPTSGRGSWPIA
ILTKSGVDFQDNVIDTKAYQYWADLKAPSGSNVATVEIPRVKAGEYRLTVYADGLFGQFV
QDGIVITAGQRTLTNASFMEESAGKELWRIGTPDRSSGEYKHGFELDPSKPLHPEQYRIY
WAKYDFPTEFPDGIKFRVGQSKEVEDFNYVHWSSFGGKGNSVRTEPLFSPTISNWTILFD
AAAAELQRSQSGKNEATFTIQLAGAKTAAGNTDVFNATEPYSNLPYVVTVNGHELEPWVI
PYFHSSSCAVRSSVSCYNIAHKFVFETKWLKESDNEIVLRLPADAMDYESAILPQQVYVQ
YDALRLEVQ
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccgggtctccttcgggcgctcagctccctgctccttgcacttctggtcttc
agccgcgatgttctcgccgtcctcaacgtcaacgagacatcgacgaacatcttcatcgag
aatgaccggctctatctagcattggacaagtcaaagggcgtcatcgttgaccttgcgctc
gacgagcaggaccttctcggtcccgtcagcggcagcaccggaatcggcccgtatttggac
tgctactgcacgccttcgggcttctatacgcccggcagcatagctccgcagtaccagata
ttccaggatgtggactctgcgggcgtgccatacgctggcgttgtgatgggtgaaacctac
ccggcgactgggcaggtgctggaattctactacttcgtgcgggaaggagagaccggcatc
cacacgttcagtcgtctgacgtatttcaacgagacaacgccgttcctcagaaatctccag
gagttccgaaccctgttccgtcccaacacggcgctttggactcacctctcgaccaacgag
aagacctatgcaccgctgccgtccaaggatgccgtggcaaatgaggttgttgtccaggat
gctacgtggtatctcggaaatacaccagaggatcaatatgttcagcagtgggccgactac
ttcacgaagtacaccttccaggcccagtggagggaccacagagtccacggaatgtactca
gacggctcgaccagcacgaccaatgctacttttggagtctggatggtaatgaacaccgtt
gacacttacttcaacggacccaagaactccgacttgacggttgatggcattgtttacaac
tatattgcatccaaccaccacggcaatggtacaccaaacatcaccaacggctttgaccgc
acatttggacctttctactaccatttcaacagcggcaagcccggcacatccctacaggct
cttcgcgaagacgccctacagtacgcggacccatcatggaacgcccagttttacgacgac
atagctgaacacgtaccgaactacgtgccaacctcgggtcgcgggagctggcccattgcc
atcctgaccaagagcggcgtcgacttccaggacaacgtcatcgacaccaaagcgtaccag
tactgggcagacctgaaagctcccagcggctccaacgtggctaccgttgaaattcctcgc
gtcaaagctggcgagtatcgtctaacagtctacgcggatggcctgttcgggcagtttgtg
caggacggtatcgtcatcactgccggacagaggaccctgacgaatgcatcgttcatggag
gaaagcgcaggaaaggagctgtggcggatcggtacgccggaccggtcaagcggcgagtac
aagcacggctttgaattggacccgtcgaaaccgctgcacccagagcagtaccgcatctac
tgggccaagtacgacttccccaccgagttccccgatggaattaagttccgtgttggccag
agcaaggaggtcgaggattttaattatgtgcattggagctcgtttggaggaaaaggcaac
tccgtccgcacggagccattattttccccaacgatcagcaactggacaattctctttgat
gcggcagcagcggagctgcaacgcagccaaagtggcaagaacgaggctacgttcaccatc
cagcttgctggtgcaaagactgctgcgggcaacacagatgtgttcaatgccaccgagcct
tactcgaaccttccatacgtcgttaccgtcaatggccatgagttggagccctgggtgatc
ccatacttccattccagctcttgtgctgtgcgctcttccgttagctgctacaacattgcg
cacaagtttgtctttgagaccaagtggctcaaggagagcgacaatgagatcgtccttcgg
ctaccggcagatgctatggattatgagtctgcgatcttgccccagcaggtgtatgttcag
tacgatgcattgcgcctggaggtccagtag
DBGET
integrated database retrieval system
