Neofusicoccum parvum: UCRNP2_1615
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Entry
UCRNP2_1615 CDS
T03126
Name
(GenBank) putative filament-forming protein (tpr p270) protein
KO
K09291
nucleoprotein TPR
Organism
npa
Neofusicoccum parvum
Pathway
npa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
UCRNP2_1615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_1615
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
UCRNP2_1615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
ZapB
Pro_CA_2
Motif
Other DBs
NCBI-ProteinID:
EOD51576
UniProt:
R1GTJ2
LinkDB
All DBs
Position
Unknown
AA seq
1985 aa
AA seq
DB search
MATAAIDTAYIAAAYSFPEPTLQTLLDAPTIELVQQLLVKIEAKAHEFDDVKAEKLRSDV
ELENAVRTGDARARALKASVDKNLKELEEVRRKLSEEENARVSLESELQNMKSSSTTSSS
ETEVLRARVNTLEASNRETVALLEAKTTAHDKLAEELSAQHQKIVALRREISELEDKNQA
AQNAATNTKFRQQALQQEIDLLKKNNEWYESELQTKSTEYSKYRKEKSARISELQRMYDD
ASETIESLRRTEAGLRSRVDEVNQKAEDSLTKIQQLQEAAAKAEESFRVELDSSRRLADL
QKQSADTARARLQEVQGSLDKVKEDAAEELGQMQAEVETERSEKEMALQKIEELEVQVEK
MESDLATRQHTAVAVTGTPRRAVNGLGGAATPGRSGSPTFGTPGYGTPSRVKGGLTFTQL
YAEHAQVKSELDAERRRNAKLSSTIDEMIQDLEAKQPEIEELRAGHQKLENNVLEISELL
EEANRDRDAAKKEARKWSGQVEGLQREGDVLRQQLQDLSNQVKALLFEVTVRDQGLEALN
AAEQAEFEKIVRGEMEVEDGVTDTSRFISQRLVIFRNVEELQEQNNKLLRVTRELGERME
GEEARAKQNQAEKDREELEELRRKASRYEDELKSLNTVAESYQRERDMFRRMLTHRGQIP
PGSDLASMFGESVGPSTPPPGGFSHSIGPGTSPHAKDLADYAKLLKELQSHFDAFRKEST
TDHAMLKEQADRLAKEKSDLQMEINRAGSQLTLAHERYELLQANFSQLRSENAELQKRGH
ALAETSAKQDLKTAQVAEELYEAKAQADGLRHEAANLKAEKELWKNIETRLTEDNRALSD
ERTRLNKMIADLQNLQNERELADSETRRRLQTRIDALESELQTTKRKLDSEIEDSKRAAL
RREYDAEQNRTRIDDLVKTLGNTREELVAAKTQRDQLQARVDELRIELRNAEEKAVALAP
RPTPRRESVVQNGEAESSDLSREQELGVEVADLKRDLEIARNELENAKTHVEQYKAIAQA
SEEELQSINETHDQYREEMDGIMAEKDAKIRDLEQRVEDISTELATTNTELSNLRTGHEE
SLARSNEQKAILEADIVRLKDENERYQETARLRQEDLKAQAAIAQQAQESYEIELVKHAE
AAQNLQKVRTEHNQLKSEVAEIKAEAQAAKAALESSEDSWNETRSRYERELSDLKIRRDE
VNDQNQRLHQQLETVSAQISALRQSRASLGAEPAEDGSFVSPDTENLNEVIRFLRREKEI
LETQYDCQIRESNRYKQQLDHTRTELEQAREKLSQERQNQVENQQSNQTHAKLKEKIEEL
NLFRESSATLRLEARQAQEKLADKVKEVESLMAQIEPLQTSVRELENQVETKSGELQQLK
EDRDRWQQRTQNILQKYDRVDPEELAELKNKITTLEAERDQLIAEKAPLQAQIDGFEEQL
ANAKTEQARITGEEKDAQHGERRERLIEQFKGRSRELSGKIKEANQEKETANQAKEQLEQ
ELAAVKEELEKAKAAHEEALASAKPPQADTQMQDTPEEGEAEEGQDSGVPSPEIALLEAR
AQAAEAKAADESTRAAELQRQVEALETKVQELEAQITELQQRLDTTASESSRLKEAAPTQ
TVPADTAPTETIPAENTEPIQPLAADNETLEALEKLKAELATAQQEVETLRANATSTNTT
APIGEAMPAGEGAVSAEQLAEQIAKVKAEAEESVQAAAARFQQRADQMRAALTKKLTEGK
QALRQESEEAARKLKEEHEQAMQELKTEHEAEIQRIKAEHQKELERVKGGAQGEQPAPAT
ADVPVDGAPEGASESAPASTTTEVKSEPSKFSDLTDQEVKDLVNNNNTVKSIITRNIKTK
LSVELEAKAKELNEKHEKETEELQKKADGAVAMAEKRVALKLNMAQNRERNATAKIEVVQ
KAAEETPERPVGERLHSNPSSKRRRLTQLPRLRKLRLCNRNSNRHQLGVLASRPNNSFLG
LTSSQ
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggccatcgacacggcctacatcgccgcggcctactccttcccggagccg
accctacagacactgctcgacgcgcccactatcgagcttgtgcagcagctcttggtcaaa
attgaagcgaaggcacacgagtttgacgatgtgaaggctgagaagcttcgctccgatgtc
gagctcgaaaacgctgtgcggacgggcgacgcccgtgccagagcactcaaggcatcagtg
gacaagaacctgaaggagctggaggaggtgcgcaggaagctaagtgaggaggagaacgcg
cgcgtctccctagaatccgagcttcagaacatgaagtcatcgtcgacgacatcatcctcg
gaaaccgaagttttgcgagcgcgtgtcaacacgctggaggcttcgaatcgcgagaccgtt
gctctattggaagcgaagaccacagctcacgacaagcttgccgaggaactctcggctcaa
caccagaagatcgttgctcttcgtcgtgagatttcggaacttgaggacaagaaccaggca
gcgcagaatgcagcaacgaacaccaagttccgtcagcaggccctacagcaggaaatcgac
ctcctgaagaagaacaacgaatggtatgagtcggagcttcagacaaagagcacggagtac
tcgaagtaccgcaaggaaaagagtgctaggatttcggaactgcagcgcatgtacgatgac
gccagtgagacgatcgagtccttacgccgcaccgaggccggtctgcggagccgtgtcgac
gaggtcaatcagaaggccgaggactctctaacgaagatacagcaactccaggaagccgcg
gcgaaggctgaagagtccttccgtgttgagctggacagctcacgccgcctggccgacctt
caaaagcagagcgcggataccgcacgagcgcgccttcaagaagttcaaggttctttggac
aaggtgaaggaggatgccgcagaagaacttggtcagatgcaggctgaggtagaaacggag
cgatcagagaaagagatggcattgcagaagattgaagagttggaggttcaggttgagaag
atggaatcggatcttgcaactcgccaacatactgctgtggccgttaccggaactcctagg
cgcgctgtcaatggccttggcggtgctgctaccccaggacgttcaggatctcccaccttt
ggcacacccggctatggtacgccttcgcgtgtgaaaggcggtcttacattcactcagctc
tatgccgaacatgcccaggtcaagtcagaactcgacgcagagcgccgccgcaacgcgaaa
ctgagcagcaccatcgatgagatgatccaggatctggaagcgaagcaacccgagatcgaa
gaacttcgagccgggcatcagaagcttgagaacaacgtgcttgaaatctctgagcttctg
gaagaggcgaacagagatcgggatgccgccaagaaggaggcaaggaagtggtctggccaa
gtcgaggggctacagcgcgaaggtgatgtgttgcgacagcagctccaagatttgagcaac
caggtcaaggctctgcttttcgaagttactgtccgcgaccaagggctcgaggccctgaat
gctgccgaacaggcggaattcgagaaaatcgtccgtggtgaaatggaagttgaagatggc
gtcacggacaccagtcgcttcattagccagcgcctggtcatattccgtaacgtcgaagag
ctgcaagagcaaaacaacaagctcctccgcgtcactcgggagcttggagagcgcatggaa
ggtgaagaggcgagagccaagcaaaaccaggcggagaaagaccgcgaagagctagaagaa
ttgaggaggaaggcatctcgttatgaggacgaactcaaatccttgaacactgtcgcggag
agctaccagcgtgagagagacatgttccgccgcatgctcactcaccgtggtcaaatccct
cctggatcggaccttgcgtcaatgtttggagaatcagttggcccatcgactccacctcct
ggcggattctctcatagtatcggccctggcacctcgcctcacgcaaaggacctcgccgac
tatgccaaactcctgaaggagctccagagccacttcgatgctttccgaaaagagtcgaca
acggaccacgccatgctcaaggagcaggctgaccgattggctaaggagaagagcgatctc
cagatggaaattaaccgcgccggctcccaactcacgcttgctcatgagaggtatgagctt
ttgcaggcaaacttcagccaactgcgatccgagaacgcagagcttcagaaacggggacat
gccctggctgaaacttcagccaaacaggacctcaagaccgctcaggttgcggaggagctc
tacgaggcaaaggctcaggccgatggcctgcgccatgaagctgccaacctgaaggccgag
aaggaactctggaagaacatcgagacccgactgacggaagataatcgcgctcttagcgat
gagcggacacgcctcaacaagatgattgcggatctccaaaacttgcagaacgagcgggag
ctcgcggactcggagactcgccgtcgtcttcaaacccgcatcgatgctctggagtctgag
ttgcagactacgaagaggaagcttgatagcgagatcgaggacagcaagcgggctgccctt
cgccgggagtacgatgcagagcagaaccggactaggatcgacgacttggtgaagaccttg
ggtaacacgagggaagaactggtcgctgctaagacacagcgcgatcaacttcaggccagg
gtcgacgagcttcgtatcgagctccgcaatgccgaggagaaggctgttgctctggctccc
cgtcccacacctcgtcgggaaagcgtcgttcagaacggcgaagctgagtccagtgacctc
agtcgtgaacaggagttgggtgttgaggttgccgatctcaagcgcgaccttgagattgcc
cgcaacgagcttgagaatgccaagactcatgttgagcagtacaaggccatcgcgcaggct
tctgaggaagagcttcaaagcatcaacgagactcatgaccaataccgtgaggagatggac
ggcatcatggcggagaaggatgcgaagatccgcgatcttgagcagcgggtcgaggatatt
tccacggaactcgccacgacaaacaccgagctttctaacctgcgtaccgggcacgaggag
agtctggcacgttctaatgagcagaaggctattctcgaagccgacattgtccggctcaag
gatgagaacgaacgctaccaggagactgcaaggcttcgtcaagaagacctcaaagctcaa
gcagcgattgctcagcaggcccaggagagttacgagatcgagttggtcaaacatgcagag
gctgcgcaaaaccttcagaaggtccgcaccgagcacaaccagctcaagagtgaggttgcc
gagatcaaggcagaggcgcaggcggccaaggctgccttggaatcgagcgaggacagctgg
aatgagactcgcagccgctacgagcgtgagctctcagacctcaagatccgtcgggacgaa
gtcaacgaccagaaccagagacttcaccagcaactcgagacagtcagcgctcagatttct
gctctcaggcagagtcgcgcttctcttggtgcagagcccgccgaggatggctccttcgtt
tctcccgacaccgagaatctcaatgaagtcattcgcttcctccgtcgggagaaggagata
ttggagacccaatacgattgtcagatccgggaatccaaccgctacaagcagcagcttgac
cacactcgaaccgagcttgaacaggctcgcgaaaaactcagccaggaacgccagaaccag
gttgagaatcagcagagcaaccaaactcacgccaaactcaaggaaaagatcgaggagctc
aatctcttccgtgaaagcagtgccaccctgcgccttgaggctcgtcaagctcaagagaaa
cttgccgacaaggtcaaggaggttgagagcctcatggctcagatcgaacccttgcaaacc
tcggtgcgcgagttagagaaccaggtcgaaaccaagtcaggcgaacttcagcaactcaag
gaggaccgtgaccgctggcaacagcggacgcagaacattctgcagaaatacgaccgcgtc
gatccagaggaacttgctgagctcaagaacaagatcaccactctggaggccgagcgcgac
caacttatcgctgagaaggcgccactccaagcccagatcgatggctttgaggaacaactc
gccaatgccaagactgaacaagccaggatcacgggtgaagagaaggatgcacagcacggt
gagcggcgcgaaaggctcatcgagcaattcaagggtcgttcgcgcgaactctcgggcaag
atcaaggaggcgaaccaagagaaggagactgccaaccaggcaaaggagcagctggagcag
gaattagcagcggtgaaggaagagctggagaaggcgaaggccgctcacgaggaggcactt
gcaagcgctaaacctccccaagccgacacgcaaatgcaagataccccggaggagggtgag
gctgaggaggggcaggactctggcgttcccagtccagaaattgctctcttggaggcccgc
gcccaggctgcagaggccaaggctgcagatgagtcaaccagggccgctgagctgcaacgc
caagtcgaggcattggagacgaaggttcaggagctcgaggctcaaattaccgagctccag
caacgccttgacacaacggcttccgagtcgagccggctcaaggaggctgcacctactcag
acagtcccagcggacaccgcaccgaccgagaccattccggccgagaacactgaacctatt
cagcctcttgctgcagataatgagactttggaggcgctcgagaagctcaaagccgagctc
gccacggcccaacaggaggttgaaaccctccgcgccaatgcaacttcgacgaacaccacg
gcaccgatcggtgaagccatgccagcaggagaaggtgccgtctctgccgaacagctggcc
gaacagattgcgaaggtaaaggctgaggctgaggagagtgtccaggcggcggcagccagg
ttccagcaacgtgcagaccagatgagagcagctcttacgaagaagcttaccgagggcaag
caagcattgaggcaggagagtgaagaagcagcccgcaaacttaaggaggaacacgagcag
gcgatgcaagagctcaagacagagcacgaagccgaaattcaacggatcaaggccgagcat
cagaaagaactcgagcgcgtgaaaggaggtgcacagggcgagcagcctgcacctgcaact
gccgatgttcccgtggatggtgcccctgaaggcgcgtcagagagcgcgcctgcttctacg
accaccgaagtcaagtccgagccgtcgaaattcagtgacctcaccgaccaggaggtcaag
gacttggtcaacaacaacaacacagtcaagtccatcatcactcgaaacatcaaaacgaag
ctttctgtcgaactggaggccaaggccaaggagctcaatgagaagcacgagaaggagacc
gaggagctgcagaagaaggcagatggtgctgttgctatggcagagaagcgtgtcgccctg
aagctgaacatggctcaaaaccgggaacgcaatgcaaccgcgaagattgaggtcgtacaa
aaggccgccgaagagacgcctgagcgtccagtcggagagcgcctgcacagcaaccccagc
agcaagcgcaggcgcctaacacagctccccaggctgcgcaagctgcgcctctgcaaccgc
aacagcaaccgtcaccagctgggggttttggccagccggcccaacaacagcttcctcggc
ctcacgtcgtcccagtga
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