Neofusicoccum parvum: UCRNP2_1625
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Entry
UCRNP2_1625 CDS
T03126
Name
(GenBank) putative nucleoporin sonb protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
npa
Neofusicoccum parvum
Pathway
npa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
UCRNP2_1625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_1625
03036 Chromosome and associated proteins [BR:
npa03036
]
UCRNP2_1625
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
UCRNP2_1625
Chromosome and associated proteins [BR:
npa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
UCRNP2_1625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
TPR_GEMI5
Motif
Other DBs
NCBI-ProteinID:
EOD51579
UniProt:
R1GZR9
LinkDB
All DBs
Position
Unknown
AA seq
1984 aa
AA seq
DB search
MSAFGGFGGGFGANNNQQQQQQQSTGFGGFGSTNNNTGGGFGSTGFGGSNTGSGSIFGGG
STGGGGFGSGGANNGTAGTPFQAHVEKDGATSQNAHYQTITFQQPYQGFSLEELRLQDYA
QGRRYGNANGQAGAFGASTGFGGFGSNTTSNTPAAGGFGANTANTSGGMFGANNTNNTTT
PFGGAQNNTAGGFGANNTSGGLFGAAKPATGGGLFGNNTASSGQTSGGMFGTSGGSTGTS
AFGGGNTGGFGNNTNSGGLFGANNQQQQKPAFGGFGSGTGTGFGGSTTGTGFGANNQTST
GGGLFGGGNNNATAPAFGANNQQPQQQNTASNPFGGFGQNNQTQNQQPATGGGLFGGGFG
QNNQQNQQQAKPLFGGATTGSTGGGLFGGGQQQQNQAGGGLFGGGQQQQNQTGGGLFGAK
PAGQTGGLFGGATNTNTNTGGGLFGGGLGQSQNNQQNQTGGGLFGAKPAGQTGGLFGGAT
NTNTNTGGGLFGGSLGQQNNTASSGLGGGLFGGAQQQNQQQQPALGGSLFGASMAQQSTN
QAPQWTASMNGNPYGNDHLFASLNTPSQSVGPLATPLSSSQKQKKNAILPQHRINPAASS
RLITPQKRLNGYGFSYSSYGTPGSAMGTGSPSFSGSLLGGGGSFSKSLSKSFSTSSLKNT
WNAEDSILSPGAFNPSKRPAYANTGSMKKLNIDRALNVRPSLFGDETNSSPASQKKRVSF
DASTTLNGSLDGTNGALVPAERESTTPSAEEQGFLRSSRNGEKQMNGAAINGDKPEVEQV
MGNELAIVPEDREPDAAKILKIANEKARKAQKDQTPGEYWSEPSLDELKKMSKQELKSLV
GFRVGRMGVGEIQFEHPVDLTAIDLDKLFGDCIQLNVRNATVYPSKTSTPPMGKGLNVPS
LILLENSWPRAQAGRLPVHEKGGPRFQKHIDRLKKVDGTEYVGYDSKTGTWKFRVQHYTT
YGLDYDDDEDDSILTEVPADLESPTPMARYAPAPLNTLSRVSQDNSTIVSPPESSPDDTF
EFKRGLVKRNNVPGSFDEEGSYYDGDMMDGQDDTLNSTQSFLDERSVGPYEDGSDMDDAA
SYRSGSDSEPEHTMAGSFPIPDLTTEQTPAKNTVFDASGMPKSILKASRAGFGTPTKGAF
DFEGDWAAQLQRTISPKKQDRQTLRENQNHALRQFDEKNDETPKASTFVTNNSNRPFSNS
IDLMNSLFGQSTARRTAATVSANGSPVKKGKGLEGLPDVGPLAHWPYQKRPKTGDDLEDP
NEADKAFHDTFKPTWAHDGTLTYTALGNAPRMQGNFIANLKSSIVSQHKDVRFAKFSTPE
DIWPATIVEQASSSNTNLIDGSDDEPPRAETLEMKFADLANAVSIDTPAGRFEQEVWKLA
SILFDSLSEKDIPDGVPHDLASYENQIRTTKLSEFWKSIVQADADRQSRLAKSAEEKALA
RLSSHNITEACDALIEGKDFRLATLVAQIGGPQSSRDAIAAQIEDWRAQNVLSEMSDSVR
ALYTIIAGEFTVSDGAPGPAAENRADDVRISSHCGWDWRQAFGMRLWYGRQTDSADDGLI
EYAVQRFEDELHEGDESVKPVPWFVRAGVQMGWDDPTPQERQDVLWGLLKLYKAYRQNDM
TFHVADILAPENTTGNPLNARLSWQLLTLLRAINILPREIVTSDMDYDGPRPGEYFNARE
ITEISDALTQTFSLPLLNPTHWTHATWVLIHHTDDAIRATAIKDLLAFNAGLIGEDAASD
TTFAHLTTALRIAPSWIYAAKALHARAVLSDPVKEVQYLLAAQDFAAAHEVLCRAVAPAA
VIANTQPDLDALANLLTGFAGAPEKDLLEWQSGGAIYADYLALLRLHQAPHTHHHGLNGS
VSSPARPTSAGSGVIAVSTRADESEQKALLHRLSAALAGLAALLHTRDVLERAALKEIAR
AVLEAANRQAAAQTHEAMDVEGSGVLVEKDRRNVLRMGVTEEASLWLGREVGMEYYRCVV
GGGR
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctttcggtggtttcggaggcggctttggcgccaacaacaaccagcagcagcag
caacagcagagcactggcttcggcggtttcggttcgacgaacaacaatacaggtggaggc
tttggctccactggcttcggtggttccaataccggcagcggcagcatcttcggaggaggc
agcactggcggcggcggcttcggttctggtggagcgaacaacggcaccgctggcactccc
ttccaggcacacgtggagaaggatggcgctaccagccagaatgcgcactaccagactatc
accttccagcagccctaccaaggcttctctcttgaggagttgaggttgcaggattatgct
cagggtaggcgttacggcaacgcgaacggccaggctggtgcttttggtgcgagtacagga
ttcggaggttttggctcaaacaccaccagcaacactcctgctgcaggaggatttggcgcg
aacaccgccaacacgtccggaggcatgtttggtgcaaacaacaccaacaacactaccact
ccattcggcggtgcccagaacaacactgccggcggtttcggcgccaacaacaccagcggt
gggcttttcggcgctgctaagcctgccacgggcggcggccttttcggcaacaacaccgca
tcatcgggacagacaagcggcggcatgttcggcacttcaggtggcagcacaggaacatcg
gcattcggaggtggtaacactggaggtttcgggaacaatacgaacagtggtggtctcttt
ggcgcaaacaaccagcaacagcaaaagcctgcttttggcggattcggctctggcaccggc
actggattcgggggctccacgacgggcaccggatttggggcgaacaaccaaacttccacc
ggcggcggactgttcggaggtggtaacaacaatgcgacggcacctgcatttggagccaac
aaccaacaaccgcagcagcagaacactgcctcgaacccctttggaggatttggccagaac
aatcagacccagaaccagcaaccagcaaccggtggcggtcttttcggaggtggcttcggg
cagaacaatcagcaaaatcagcagcaagccaaacctcttttcggcggcgccaccactggt
agcactggtggtggtctgttcggcggtggccagcaacaacaaaaccaggctggaggcggc
ctcttcggtggcggccagcaacagcaaaaccaaactggcgggggtcttttcggtgcgaag
ccggctggccagacgggaggtctgttcggtggtgccacgaacaccaacaccaacacgggc
ggtggtcttttcggcggtggcctaggtcagagccagaacaaccagcagaaccaaactggt
ggtggtcttttcggcgcgaagcctgcgggtcagacaggcggcctctttggtggcgccacg
aacaccaacacgaacactggtggtggtctttttggcggcagccttggccagcagaataat
acggcgtcttcgggtctcggcggtggcctctttggaggtgcccaacaacagaaccagcag
cagcagccggctctcggaggcagcctgtttggggcgtctatggctcagcagagcaccaac
caagctcctcaatggactgcttccatgaatggtaacccgtacggaaacgatcatctcttc
gctagcctaaacacgccatcccagagcgtgggcccgctggctaccccgctctccagcagt
cagaagcagaagaagaacgctatactccctcaacaccgtatcaaccctgctgcctcctcg
cgactcatcactcctcagaagcgtctcaatggctacggtttctcttactcgtcctacggg
acccctggtagcgccatgggcactggtagccctagcttcagtggcagcctattgggcggt
ggaggtagcttctcgaaatctttgtcaaagagcttctcgactagtagcctgaagaacacc
tggaacgcggaagacagcatcctgtctcctggtgcttttaatccctccaagcgcccagcc
tacgcaaacaccggcagcatgaagaaactcaacattgatcgcgctcttaacgttcgtcca
tcgctttttggcgatgaaaccaacagcagccctgcttctcagaagaagagggtcagcttt
gatgccagcaccactctcaacggaagcctggacggtaccaacggcgccctggtcccagct
gaacgcgaatcaactacccccagtgctgaagagcagggcttcctgcgttcgtccaggaat
ggagagaagcagatgaacggcgctgcgatcaacggtgacaagcccgaagtggagcaagta
atgggtaacgagctcgctattgtccccgaggatcgggagcctgatgccgcaaagattctc
aagattgccaacgagaaggcccgcaaggcccagaaggaccagacccccggcgaatactgg
tcagagcctagtttggatgagctgaagaagatgagcaagcaggagctcaagtctcttgtt
ggattcagggttggccgcatgggtgttggcgaaattcaattcgagcaccctgtcgatctg
actgccatcgacctggacaagctctttggcgattgtattcagctcaacgtccgcaacgcc
accgtctacccgtctaagacctccacacctcctatgggcaagggtcttaatgttccgtcg
ctcatcttgctggagaactcatggcctcgtgcgcaggctggacgacttccggtccacgag
aagggcggtccgcgcttccagaaacatatcgaccgtctgaagaaggttgacggtacagag
tatgttggctacgattcgaagaccggcacctggaagttccgtgtccagcattacaccacc
tacggcctggactacgatgatgacgaggatgattctatccttactgaggttcccgccgat
ctggagtctcctaccccaatggcccgctacgcaccggctcctctcaacactctgtcccgt
gtatctcaggacaactccaccattgtcagccctcctgagtctagccccgatgacactttc
gagttcaagaggggtctggttaagcgcaacaacgtccccggtagctttgatgaagaaggt
tcctactacgacggtgacatgatggatggacaggatgacactctcaacagcactcagtct
tttttagatgagcgctccgtgggtccctacgaggacggcagcgacatggatgacgctgcc
tcctaccgcagtggatctgattcggaacctgagcacaccatggcaggctctttccccatt
ccggatctcaccacggagcagacgcccgccaaaaacactgtcttcgacgcttcgggtatg
cccaagtccatcctgaaggcaagccgcgcgggatttggcacgccaaccaagggcgccttc
gactttgagggtgactgggccgcccagctgcaacgcacaatcagccccaagaagcaggat
cgccagactcttcgtgagaaccagaaccatgctctgaggcagttcgacgagaagaatgat
gagacgcccaaggcttcgacttttgtcaccaacaacagtaaccggccattttctaacagc
atcgacttgatgaactctttgttcgggcagagcacggctcgtagaaccgcggccacagtg
tcggccaacggatcgccggtgaagaagggaaaaggtctcgaggggctgccggacgtcggg
cccctggctcattggccctaccaaaagcgacccaagactggtgatgaccttgaggacccg
aacgaggccgacaaagccttccacgacactttcaagccgacttgggcgcatgatggcacc
cttacatacaccgcgctgggcaatgcaccgaggatgcaaggcaacttcattgccaacctc
aagagctccatagtcagccagcacaaggacgtccggtttgccaagttctctacccctgaa
gacatttggccggcaaccatcgtggagcaagccagctcgagcaacacgaacttgatcgat
ggttcggacgatgaacctcctcgtgctgagaccttggaaatgaagttcgcggatctcgcc
aatgctgtttccatcgacacaccggctggcaggttcgagcaggaggtctggaagctcgct
agcattctcttcgacagccttagcgagaaggatatccccgacggcgtccctcatgatctt
gcatcatacgaaaaccagatccggacaacgaagctgagcgagttctggaagtcgattgtg
caagctgatgccgatcgccagtctcgtctggccaagtctgccgaggagaaggctctcgcg
cgtctgtccagtcacaacatcaccgaggcgtgtgacgctctcatcgaaggcaaggacttc
cgtctcgcgactcttgtggcccagatcggaggcccccagtcttctcgggatgccattgct
gctcagattgaggattggcgtgctcagaacgtgctatcagagatgagcgactcagtacgc
gctctctacaccatcattgccggcgaatttaccgtctcagatggtgctcctggccccgct
gctgagaacagggccgatgacgtccgtatctcttcccactgtgggtgggattggcggcag
gcttttggcatgcgcttgtggtacggtcgccagactgacagcgccgatgacggcctgatt
gagtacgcagtgcagcgctttgaagatgagctccacgaaggtgatgagagcgtaaagcct
gttccttggttcgttcgcgcaggcgttcagatgggctgggatgacccgacccctcaagag
cgtcaagatgtactctggggtcttctgaagctctataaggcttatcgccagaacgatatg
actttccatgtagccgatatcctggcaccggagaacacgaccggcaaccctctcaacgca
cgcctgtcgtggcagctcctgacgcttcttcgggcgatcaacatcctcccgcgtgagatt
gtgacgagcgacatggactacgacggccccaggccaggcgagtacttcaacgcgcgcgaa
atcaccgagatcagtgacgcgttgacgcagacgttctcgctgccgctcctcaaccccacc
cactggacgcacgcaacctgggtgctcatccaccacaccgacgatgccatccgtgccaca
gccatcaaggacctgctcgccttcaacgccggcctcatcggcgaggatgccgcctcggac
accaccttcgcgcaccttaccaccgccctccgcatcgccccgtcgtggatatacgctgca
aaggcgctacacgcccgcgccgtcctgagcgaccccgtcaaggaggttcagtacctcctc
gccgcccaagacttcgccgccgctcacgaggtcctctgccgcgccgtcgcacccgccgcc
gtcatcgcaaacactcagcccgacctcgacgccctagccaacctcctaaccggcttcgcg
ggcgcccccgagaaggacctcctcgagtggcagtccggcggcgccatctacgccgactac
ctcgcgctgctgcgcctgcaccaggcaccgcacacgcaccaccatggcctcaacggcagc
gtgtcgtcgcccgcccgccccacctccgccggctccggtgtcatcgcagtcagcacccgc
gccgacgagtcggagcaaaaggccctgctgcaccgcctctcggccgcgctggccggcctg
gccgccttgctgcacacgcgtgacgtgctcgagcgcgccgccctcaaggaaatcgcgcgc
gccgtcctcgaggccgcgaacaggcaggcggctgcccaaacgcacgaggctatggatgtg
gaaggcagcggcgtgctggtcgagaaggatcggaggaatgtgctgcgcatgggcgtgacg
gaggaggcgagcttgtggctgggcagggaggtcggcatggagtattatcggtgtgttgtc
ggtggtgggagatag
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