Neofusicoccum parvum: UCRNP2_1802
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Entry
UCRNP2_1802 CDS
T03126
Name
(GenBank) putative dead deah box protein
KO
K18664
antiviral helicase SLH1 [EC:
5.6.2.6
]
Organism
npa
Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_1802
Enzymes [BR:
npa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UCRNP2_1802
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
UCRNP2_1802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
AAA_30
DEXQc_Suv3
Helicase_PWI
Motif
Other DBs
NCBI-ProteinID:
EOD51407
UniProt:
R1EUX9
LinkDB
All DBs
Position
Unknown
AA seq
1915 aa
AA seq
DB search
MSPALDVAESRWLAQLAEMRAAIAELKLPQKNGDAPVYGADIDIDDDDLSGTASGDDIWD
LVSDGESADYSSDQFDGAGSLPADAGPAGPIYSQSWLGQQCAQVALRGSGLDAQTLQDQI
MALLGSDSNDEELQMMLADIVGYGELDLVADLIGHRKQITKSAQEEAQRSGIFGRLQTKQ
EREEALRRQDHEHKTAALAPSVDRGGDQYPHVYKAHDAGNTLSAFGKKYSLPIGSKREDN
DKFEEYSIPAARVGTLGTGQKLVKISDLDGLCRRTFKGYQTLNRMQSLVYPVAYRTSENM
LICAPTGAGKTDAAMLTILNTVAKNIIPSPWEEPDATDFVVQTDEFKIVYVAPMKALAAE
IVEKLGKRLAWLGIQVRELTGDMHLTKAEIVATQIIVTTPEKWDVVTRKSTGDTELVQKV
RLLIIDEVHMLHDERGAVLESLVARTQRQVESTQSLIRIVGLSATLPNYIDVSDFLKVNR
MAGLFYFDASFRPVPLEQHFIGVKGKPGSGKSRDNLDHVSFEKVKEMLQVGHQVMVFVHS
RKDTFKTAKILWEKAMEDGCTELFDPSGHPDYDLAVRDMKSSKGRDLRELLPKGMGTHHA
GMPRSDRNLIERLFGSGVLKVLCCTATLAWGVNLPAAAVVIKGTQLYSAQEGKFVDVGIL
DVLQIFGRAGRPQFEDTGIGFICTTHDKLQHYLTAVTQQQPIESNFSKRLIDNLNAEISL
GTVTSVPEAVTWLGYSYLFVRMQRNPHAYGIDWLEISNDSQLVERRTKLITDAARVLQQS
QMIVFNETTGELKAKDVGRIASQYYILQTSVEIFNTMMRAQASEADVLKMISMSGEFDNI
QSRESEEKELLRLKEDEFITPCDIEGGVGTPHSKTNILLQGYISKARLEDYTLQSDTNYV
AQNATRICRALFMIALNRRWGHQCLVLLSLCKSIERQVWPFEHPFHQFDLPRPVIRNLDE
KSSVSSVEALRDMEPAEIGQLVHNNKMGHTISKLLDNFPTLSVEAEIAPLNRDVLRIRLY
LTPEFRWNDRHHGSSESYWIWVENSETSEIYHHEYFILSRRKLYDEHELNFTIPLSDPLP
SQIYVRAVSDRWLGAETVTPVSFQHLIRPDTESVYTDLLNLQPLPISALKNPLLEEIYGQ
RFQFFNPMQTQLFHCLYHTSANVLLGSPTGSGKTVACELAMWWAFRENPGSKVVYIAPMK
ALVRERVQDWGKRLTGPMGLKLVELTGDNTPDTRSIRDADIIITTPEKWDGISRSWQTRD
YVRKVSLVIIDEIHLLGGDRGPILEIIVSRMNYIASQKKGSVRLMGMSTACANATDLGNW
LGVKDGLFNFRHSVRPVPLEIYIDGFPEQRGFCPLMQSMNRPTFLAIKTHSPDKPVIVFV
ASRRQTRLTARDLINYCGMEDNPRRFVRMSEEDLTLNLSRVKDESLREALSFGIGLHHAG
LVESDRQLAEELFANNKIQILVATSTLAWGVNLPAHLVVVKGTQYFDAKIEAYRDMDLTD
VLQMLGRAGRPQFDTQGIARIFTQDAKKDFYKHFLHTGFPVESTLHKVVDNHLGAEISAE
TIATKQDALDYLTWTFFFRRLHKNPSYYGLEISAEEHNTTAAQQLANDYMVDLVDKSITE
LADSGCAVLHSNGDVDPTPLGKIMSYYYLSHKTIRHLIKHAKPNATFADTLAWMSSATEY
DELPVRHNEELINAELNAALPLKIDEAFGHLPLWDPHTKAFLLLQAHFSRLDLPISDYVG
DQTSVLDQAIRIIQASIDVLTELGYASSVQMMITLLQCVKSARWPSDGPLAILPNVDPAA
EQQRLQSQHPNPTSLVAAVAAPRPTIEKALRDAGVAPGALQRSVKPLSVLPDLKVAVPMV
NALGLTVTVGRKNAAASAAHRMFAPRFPKPQTEGFFVVVVERGSDEIVALKRFND
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccgccttggacgttgccgaatcgcgctggcttgcgcagctggccgagatgcgc
gctgccatcgccgagctgaagctgcctcagaaaaacggggacgctcccgtgtatggcgcc
gacatcgacattgacgacgacgacctctcgggaaccgccagcggcgacgacatctgggac
ctcgtcagcgatggagaaagcgcagattacagcagcgaccagtttgacggcgccggctcg
ctccccgctgacgctggtcccgccggtccgatttacagccagagttggctcggccagcag
tgcgctcaggtggccctgcgaggctctggcctggatgctcaaactctccaggaccagatt
atggcacttctaggctctgacagcaacgatgaggagcttcaaatgatgcttgcagacatc
gtcggctacggagagcttgatctcgtggctgatctcattggccaccgtaagcagatcacc
aagtctgcgcaagaagaggcgcagcgaagcggcatcttcggtcgcctgcaaaccaagcag
gagagggaagaggcgctccggaggcaggaccatgaacacaagactgcggcattggcaccc
tctgttgaccgaggtggggaccagtacccccatgtctacaaagcacacgatgccggcaat
accctttccgcttttggaaagaagtattcccttccgattggctcgaagagggaagacaac
gacaagttcgaggagtactcgattcccgctgcacgtgttggtacgctgggtactggccag
aaattggtcaagatcagtgatttagatggcctttgcagaaggaccttcaaaggataccag
acgcttaaccgcatgcagagtctagtctatccagttgcatacaggactagcgagaacatg
ctcatttgtgctcctactggtgccggtaagacagatgcggccatgcttacgatcctgaat
actgtggccaagaacatcatcccgagcccgtgggaagagcctgatgctaccgacttcgtt
gttcagaccgatgaattcaagatcgtctacgttgctccgatgaaggctcttgctgccgaa
atcgttgagaagcttgggaagcgacttgcctggctcggtattcaggttcgtgagctgact
ggagacatgcacctcacgaaggcggaaatcgtcgcaacgcaaatcattgtgacgacccca
gagaaatgggacgtggttacgcgcaagagcaccggcgatacagaattggtgcaaaaggtc
cgcctactcatcatcgatgaggtccacatgctgcacgacgagcgtggtgccgtgctggag
tctcttgttgcacgtacacagagacaggtcgagagcacgcagtctctcatccggatcgtt
ggtttgtccgccactctgccgaactacatcgacgtctcggatttcctcaaagtcaaccgt
atggctggactattctactttgatgcttccttcaggcccgtcccgctcgagcaacacttc
atcggagtcaaaggaaagcctggttccgggaagtccagagacaatctggaccatgtgtcc
tttgaaaaggtcaaggaaatgcttcaagtggggcatcaagtcatggtgtttgttcattct
cgcaaagataccttcaagactgccaagatcctttgggagaaggctatggaagacggatgc
acggaattgtttgacccatccgggcatcccgattacgacttggctgtgcgagacatgaag
tcttccaaaggccgagatctccgcgaattgctacccaagggtatgggaacacaccatgcc
ggaatgcccagatcagaccgcaatctcatcgagcgcctttttggatccggagtcctcaaa
gtcctatgctgtacggccacgcttgcctggggtgtgaacttgcctgccgccgcagtcgtc
atcaaaggaacccagctgtacagcgcgcaggaaggtaaattcgttgatgtcggaattctc
gacgtgctgcaaatttttggtcgtgctggtcgaccccaattcgaggataccggtattggc
ttcatttgcacgacccatgacaagctccagcactatcttacggctgtcactcagcagcag
cccattgagtcaaacttctccaagaggctcatcgataatcttaatgccgaaatctccttg
ggcactgtcacttctgtgccggaagcagtaacctggctgggttactcttacctcttcgtt
cgtatgcaacgaaaccctcatgcctatggaatcgactggcttgaaatcagcaacgactcg
caattggtagagcgacgaacgaagctaatcaccgatgctgcacgagttcttcaacaaagc
cagatgattgtctttaacgagaccacaggtgagttgaaggcaaaggatgttggtcgcatt
gctagccagtactatatccttcagactagtgttgaaatcttcaacactatgatgcgggcg
caggcttcggaagcagatgtgctcaagatgatcagtatgagcggtgaatttgacaacatc
caatcccgcgagtccgaagaaaaggagcttctccggttgaaggaggatgagttcatcact
ccctgcgatatcgaaggtggcgtgggaacaccgcactcgaagacgaacatcctacttcaa
ggctacatttcgaaggcacgcttggaagactatacgctgcagtcggacactaactacgtt
gcgcaaaacgccactcgtatctgccgagctctctttatgattgctttgaacaggcgctgg
ggccatcagtgcctggtcttgttgtcactgtgcaagtccatcgagagacaggtttggccg
tttgagcatccattccatcaattcgacctcccgcggcccgtcataaggaacctggacgaa
aagagctcggtatcttctgttgaagcactccgagacatggaaccggcagagattggccag
ctcgtacacaacaacaagatgggacacaccattagcaagcttctcgataacttccctacg
ctgagtgtcgaggcagaaatcgctcccttgaaccgcgacgtcttgcgaattcgtttgtac
cttactccggaattccgatggaacgaccgccatcatggctcgtcagagtcgtactggatc
tgggtggagaattctgagacgtctgagatctaccaccacgaatacttcattctctcccga
aggaagctctacgatgagcatgaactcaacttcaccatccctctctctgaccctctgccg
tcccagatctacgttcgcgcggtctcggataggtggctcggtgctgagactgtcacaccc
gtctccttccagcatcttatcaggccggacaccgagagcgtgtacaccgaccttctcaat
ctccagccgctacccatctctgccttgaaaaatcctctccttgaagagatatacggtcaa
cgattccagttcttcaatcccatgcaaacacagctcttccattgcctataccacacctcc
gcaaatgtgctccttggttcgcctaccggatcgggaaagaccgttgcatgcgagttggcc
atgtggtgggctttccgggagaatcctggatccaaggttgtctacatcgctcccatgaaa
gcacttgtacgcgaacgtgttcaagactggggtaagcgcttgacaggcccaatgggcctc
aaattggtggaattgactggtgacaacactcccgacactcgctcgatcagagatgccgac
atcatcatcactactcccgagaagtgggatggtatcagccgtagctggcagactcgtgat
tatgtccggaaggtcagtctggtcattattgatgagattcacctcttgggtggtgaccgt
ggtcctattctggagattatcgtgtctcgtatgaactatattgcttcccagaagaagggc
tcagttcgtctcatgggcatgtcgaccgcttgcgccaacgccacggacctgggcaattgg
cttggtgtcaaagatggcttgttcaatttcagacactccgttcgtcccgttccgctcgaa
atctacatcgacgggtttccggagcagagggggttctgcccgctgatgcagtctatgaac
aggccgaccttcctggccatcaagacccactctccggacaagccagttattgtcttcgtt
gcgtctcgtcgtcaaacgcgtttaacggcaagggatctgatcaattactgtggcatggag
gataatcctaggcgattcgttcggatgtctgaggaagacttgacccttaacctttcccgc
gttaaggacgaatctctccgtgaggccctcagctttggtattggtctccaccacgctggt
cttgttgaatccgaccgtcagctcgccgaagaactgtttgcaaacaacaagattcaaatt
ctggtggctaccagcactcttgcgtggggtgtcaacttgccagctcatcttgtcgttgtg
aagggcacacaatactttgatgccaagatcgaagcgtacagggacatggacttgacggat
gtgcttcagatgcttggtcgtgccggccgcccccagttcgacactcagggaattgccagg
atcttcacccaggatgcgaagaaggatttttacaaacacttcctccataccggattccct
gttgagtcgacccttcacaaggttgtggacaatcacttgggggccgaaatctctgcagag
accattgcgacgaagcaggatgcgctggattaccttacatggacgttcttcttccgccgt
ctccacaaaaacccttcgtactacggactcgagatctctgccgaagaacacaataccact
gccgctcaacagctcgcaaatgactacatggttgacctggtggacaagtccatcaccgag
cttgctgattccggttgcgctgtcctccactcgaatggcgacgtcgaccccacacctctc
ggcaagattatgtcgtactactacctctcgcacaagaccatccgacatctcattaagcac
gccaagcccaacgccaccttcgccgacaccctcgcatggatgagcagcgccaccgagtat
gacgagctccccgtgcgtcacaacgaagagctcatcaatgccgagctcaatgccgctctc
ccgctcaaaatcgacgaagccttcgggcaccttcccctctgggacccgcacactaaggca
ttcctcctcctccaagcccacttctctcgcctcgacctccccatctccgactacgtcggt
gaccagacgtccgtcctcgaccaggccattcgtatcatccaggcctccatcgacgtcctc
acggagctcggctacgccagcagtgtgcaaatgatgatcacactcctccaatgcgtcaaa
tccgcccgctggccctcggacggccccctcgccatcctccccaacgtcgacccggccgcc
gagcagcagcgcctgcagtcccagcacccgaacccaacctccctcgtcgccgccgtcgcc
gccccgcgcccgaccatcgaaaaggcgctccgcgacgcgggcgtcgcgccgggcgcgctg
cagcgcagcgtcaagcccctttccgtcctgcccgacctcaaggtcgcggtgccgatggtg
aacgcgctgggcctgacggtcacggtgggcaggaagaacgcggcggcgagcgccgcgcac
cgcatgttcgcgccgcggttcccgaagccgcagacggaggggttcttcgtggtggtggtc
gagagggggagcgatgagatcgtcgcgctgaagaggttcaacgattga
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integrated database retrieval system
