Neofusicoccum parvum: UCRNP2_1821
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Entry
UCRNP2_1821 CDS
T03126
Name
(GenBank) putative wd domain-containing protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
npa
Neofusicoccum parvum
Pathway
npa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
UCRNP2_1821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npa03009
]
UCRNP2_1821
Ribosome biogenesis [BR:
npa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
UCRNP2_1821
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Utp12
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
DSE1_N
ANAPC4_WD40
ASA1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_TEP1_C
NBCH_WD40
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_VPS8
WDR54
PROPPIN
Beta-prop_ACSF4
RMC1_N
Beta-prop_IP5PC_F
Beta-prop_RIG_1st
Tricorn_2nd
Beta-prop_LRRK2
WD_LRWD1
BCAS3_WD40
RelA_RIS
DNAI3_WD
DIKK1-2-4_C-subdom1
DUF8055
Motif
Other DBs
NCBI-ProteinID:
EOD51393
UniProt:
R1EUC1
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MVKSYVKYEHSQTFAVVNSATSNVVWTPEPAARSHTGAGHAYVAANEEVLCWDVKKGELL
STWRDSTCSAEVTQLAQSKTDPDVFAVGHADGSIRVWDSRSSSLIISFNGHKSAITTLSF
DNSGVRLASGSKDTDIIVWDLVAEVGLFKLRGHKDQITGLKFLSVGLGAGGEEDEPISAP
AVGDEGPVFLLSTSKDALIKIWDVNSQHCIETHVAQTNGECWSMCVSPDGNGCITAGNDG
EIKVWTIDQEGLRTLSSQVGEGAEANFLSERGTLYRTGKDRTIGISFHPKTDYIAIHGSE
KAVELWRIRSDEEVQKSLARKKRRRKEKLRELKEKNGDVDMADADDLDDIATAGVGDIFV
PYVIVRTGGKVRSVDWARGSSKTLQLIVATTNNLLEDYSIPTKERTKKASKEEPPEYSRS
FSVELPGHRTDVRALALSSDDRMLASASSGSLKIWNIRTQTCLRTLECGYALCCAFLPGD
KIVVVGTKSGELELFDIASSQLVDTVQAHEGAIWTLDLHPDGKSVVSGSADKTAKFWSFE
IVQEEIPGTKRTTPKLKLVHARTLKVNDDILSLCFSPDSRLLAVATLDNTVKVFFTDSLK
LFLNLYGHKLPVLNMSISSDSKLIATCSADKNVRLWGLDFGDCHKAFFAHTDSIMQVAFI
PHPVSKEENHHFFSASKDRTIKTWDGDKFEQIQKLEGHHGEIWAMAVSRTGDFVVTASHD
KSIRVWNQSDEPIFLEEERERELEELYESTLAANLDGDDENGEKDEVGAATKQTIATLTA
GERIMEALELGLADLDVVAAWRAQKAANPTANMAPPQRDPLFMALGGISAERHVLNTVAK
IPAAQLHDALLVLPFSTVPGLFTFIRIWVQRQWSVPLVCRVLFFMLRTHQRQIVASRELK
TALEGMREDLRNTLGGLKDMMGFNAAALRFVGQRAQASTVARIEDVEDLVEEKKNGRKKR
AFVDVA
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagtcctacgtcaagtatgagcactcgcagaccttcgctgtcgtgaattcggcg
acctccaatgtcgtctggactcccgagcccgccgcgcgaagccacaccggcgccggccat
gcctacgtcgccgcgaacgaggaggtgctttgctgggatgtgaagaagggcgagctgctt
agcacctggcgcgacagcacctgctccgccgaagtcacccagctcgcccagagcaaaacc
gatcccgacgtcttcgccgttggacacgccgatggcagcattcgcgtgtgggactcgcgc
tcctcgtccctgatcatcagcttcaacggccacaagtccgccatcaccaccctgtccttt
gacaactccggcgtgcgccttgccagtggctccaaggatacagacattatagtgtgggat
ctggtcgccgaagtgggtctcttcaagctccgcggtcacaaggaccagatcacaggcctc
aagttcctttcagttggacttggtgctggcggcgaggaggatgagccaatctccgcgccc
gctgtcggcgacgagggccctgttttcctcttatcgaccagcaaggatgctctgatcaag
atctgggacgtcaattcgcaacattgtatcgagacacacgtcgcccagacaaatggcgag
tgctggtccatgtgtgtctcaccagatggcaatggctgcatcacggcgggcaatgacggt
gaaatcaaggtgtggacaatcgatcaggagggtctgcggaccctttcgagtcaagtcgga
gaaggcgcagaggcaaacttcctctcagagagaggcacgttataccgcaccgggaaagac
aggacaataggcatcagcttccaccccaagacggattacattgccatacacggttcggag
aaggcggtagagttgtggcgcatccggtcggacgaggaggtccagaagagcttggctagg
aagaagaggaggagaaaggagaagctccgggagctgaaggagaagaatggtgatgttgac
atggcagacgcagatgatttggatgatattgcgacggcaggagtcggggacatatttgtt
ccatacgtcatcgtccgcaccggaggcaaggtccggtcagttgactgggcacggggaagt
tcgaaaacgctacagctgatagtagcaaccaccaataatcttctcgaggactacagcata
cctaccaaggaacggacaaagaaggcctccaaggaagaaccgccagagtactcgcgatcc
ttctccgtagagcttccaggccacaggaccgacgtacgtgccctggcactgagctcggac
gaccgtatgctagcgtccgcttcgagcggaagtctcaagatctggaacatccggacacaa
acctgcctgcgcacgttggagtgtggctatgcattatgctgtgcctttttgcctggcgac
aagattgtcgtagttggtaccaagagtggagagcttgagcttttcgatatcgcctcatcg
caactcgtcgacaccgtgcaagcacatgagggcgcaatatggacgctagacctccaccct
gacggaaaatctgtggtctccggtagcgcggacaaaacagcaaagttctggagctttgag
attgtgcaagaggaaattccaggaacgaaacggactacgccgaaactcaagctcgtccat
gcccggacgctgaaggtcaacgacgacattttgagcctttgtttctcccccgattcccgt
ctactcgccgtggccactcttgataacacggtcaaggtcttcttcactgactctctgaaa
ttgttcctaaatctttacgggcacaagcttccggttctcaacatgtcgatctcatccgac
agcaagctcatcgcaacatgtagtgcggataagaacgtgcgtctttggggtctcgatttc
ggagattgccacaaggccttcttcgcacataccgacagcatcatgcaagtcgctttcatc
cctcacccggtatcgaaggaggagaaccatcacttcttcagcgccagcaaggaccggaca
atcaagacctgggatggtgacaagttcgagcagatccaaaaacttgagggccaccatggt
gagatctgggctatggcggtcagtcggacaggcgacttcgtggtaacagcatcacacgac
aagagcatacgcgtgtggaaccaaagcgatgagccgatcttcctcgaagaagagcgtgag
cgcgagctagaagagctctacgagtccaccctcgccgccaacctcgacggtgacgacgag
aacggcgagaaagacgaagtcggcgccgcgactaagcaaacaatcgccacgctcacggcc
ggagagcgcatcatggaagcccttgagcttggcctcgcggacctcgacgtcgtcgccgcg
tggcgcgcgcaaaaggccgccaacccgacagccaacatggcgccaccgcagcgcgacccg
ctcttcatggcgctgggcggtatcagcgccgagcgccacgtcctcaacaccgtcgccaag
atcccggccgcccagctgcacgacgcgctcctggtcctgcccttctcgaccgtgccgggt
ctgttcacgttcatccgtatctgggtccagcgccagtggagcgtgccgctcgtctgccgc
gtgctgttcttcatgctgcgcacccaccagcgccagatcgtcgccagccgcgagctcaag
accgcgctagaaggcatgcgcgaggatctaaggaacacgctgggcgggttgaaggatatg
atggggttcaatgctgcggcgttacggttcgtgggccagagggcgcaggcgagcacggtg
gcgaggattgaggatgtagaggatttggtcgaggagaagaagaatgggaggaagaagagg
gcatttgtggacgtggcgtga
DBGET
integrated database retrieval system
