Neofusicoccum parvum: UCRNP2_1856
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Entry
UCRNP2_1856 CDS
T03126
Name
(GenBank) putative squalene synthetase protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
npa
Neofusicoccum parvum
Pathway
npa00100
Steroid biosynthesis
npa00909
Sesquiterpenoid and triterpenoid biosynthesis
npa01100
Metabolic pathways
npa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
UCRNP2_1856
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
UCRNP2_1856
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
npa01006
]
UCRNP2_1856
Enzymes [BR:
npa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
UCRNP2_1856
Prenyltransferases [BR:
npa01006
]
Terpene biosynthesis
Squalene/phytoene synthase
UCRNP2_1856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
SabA_adhesion
HCNGP
NTP_transf_5
DUF6548
Motif
Other DBs
NCBI-ProteinID:
EOD51361
UniProt:
R1GSZ0
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MPKATDFVYYMFHVQELRSIIQWKVWHNPVHERDESKECESLRQCFVYLQMTSRSFSAVI
QELHPELLVPVCLFYLILRGLDTIEDDMTLDLPTKEPLLRDFDKILEKEGWTFDKNGPNE
KDRELLVHFNVVIEEFKKIKKPYQTIIKDITKKMGDGMADYANNAEHNTYGVNTVKDYEL
YCHYVAGLVGEGLTRLFVEAELANVALLKRSLLQESMGQFLQQVNIIRDIKEDLDDNRKF
WPKEIWSKHVDKFEDLFKPENRQAALNCNSEMILNALRRAPDCLFYLAGLRDQSVFNFCA
IPQTMAIATLELCFRNPAIFEKNVKITKGQACALMTRSTQNLQIVCEVFKEFSRKILKRN
DPRDPNFLEISIACGQIEQFVESIFPSQTATNKEMKPSLSPEEEAKKKKEEEEAKWDLIY
MGIAVICTLTIVSFFMVLVAYIAGARFDVAFSQIKQGMFRAPEPGSEQAQRVVEKFDHGE
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggccacggactttgtgtactacatgttccatgtgcaggagctgcggtccata
atccaatggaaggtctggcacaaccccgtccacgagcgcgatgagtccaaggaatgcgag
tcgctgcgccagtgcttcgtctatctgcagatgaccagccgtagcttcagcgccgtcatc
caggagctgcatcccgagcttctcgtccccgtctgcctcttctacctcatcctccgcggc
ctcgacaccatcgaagatgacatgactctcgatcttccgacgaaggagcctctgctgcgc
gactttgacaagattctggagaaggagggctggacatttgataagaatggcccaaatgag
aaggacagggagctcctcgtgcacttcaatgttgtcattgaggagttcaagaagatcaag
aagccgtatcagaccatcatcaaggacatcaccaagaagatgggcgacggcatggccgac
tacgccaacaatgccgagcacaacacctacggtgtcaacaccgttaaggactatgagctc
tactgccactacgttgccggtcttgttggagagggtctgacgcgtctcttcgtcgaggcg
gagctggccaacgtagcccttcttaagcgctctctgctgcaagaatccatgggtcagttc
ctgcagcaggtcaacattatcagagacatcaaggaggacctggacgacaaccggaagttc
tggcccaaggagatttggtctaagcatgtcgacaaattcgaggacctcttcaagcccgag
aaccgccaggccgctctcaactgcaactcggagatgatcctgaatgctctgaggcgcgcc
cccgattgcctgttctacctggctggtcttagggaccagagtgtgttcaacttttgcgca
attccgcagaccatggccattgcgacgttggagttgtgtttccgtaaccccgccatcttc
gagaagaacgtcaagattaccaagggccaggcatgcgcgctcatgacccgctcaacacaa
aacttgcagattgtctgtgaagtgttcaaggagttctctcgcaagatcctcaagagaaat
gacccgagggatcccaacttcctcgaaatcagcattgcttgcggacagatcgagcaattt
gttgagagcattttcccatcgcagactgcgacgaataaggagatgaagccttcattgagt
cctgaggaggaggcgaagaagaagaaggaagaggaggaggccaagtgggacctgatctac
atgggaattgccgtaatctgcacgctaacgatagtatcgtttttcatggttctcgtcgcc
tacatcgccggcgcgagattcgatgttgcattctcccagatcaagcaagggatgttccga
gctcccgaacctggttcagaacaggcccagcgcgtcgttgagaaattcgaccacggcgag
ctctaa
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