Neofusicoccum parvum: UCRNP2_1901
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Entry
UCRNP2_1901 CDS
T03126
Name
(GenBank) putative mrna 3 -end-processing protein rna14 protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
npa
Neofusicoccum parvum
Pathway
npa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
UCRNP2_1901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_1901
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
UCRNP2_1901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_19
ARM_ECM29_C
HAT
Motif
Other DBs
NCBI-ProteinID:
EOD51314
UniProt:
R1GZ10
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MADMTPEMAFLQSLQSDAAAFGNGSEPPPHQDDAQQQDSQQAEPAEDDEDDDYDPSALMP
DTAAYDPSAPPMAPQTAQSTPTPSQPASQAPSRTASAAPDQKTQAKPPRTMGGFVVDDED
DEDESPVAKAAGAQGVKTHAAAAAAAAAQPSAKARLPQDRIGILEDRIQGDPRGDLDAWL
SLINEYRRRDKLDEARGVYTRFFKIFPHAAEQWVSFANMELQANNFYGVERIFEQSLLQV
PHVELWSTYLTYIRRRNNLTADPTGTARQTVSMAYDFVLQNVGMDKDAGQLWQDYVEFIE
SGPGNVGGSTWQDQQKMDLLRKAYQKAICVPTDAVTALWKQYDRFEMGLNKVTGRKFLQE
KSPAYMTARSSIVALENITRELNRTTLAKLPPALGFDGDLEYMKQVEIWKKWIAWEKEDP
LVLKEEDPAAFKSRVIFVYKQALMALRFWPEMWYDASEFAFQNDQEQEGNDFLAKGCEAN
PESCLLAFKRADRIEITSTNEEGEDSLVRRGELVREPYQKALDALYALINKTKARETDMV
NRIKDAFAQQTDNNNEEGDEDDEDQESNGASKAKEAALQAQIEAIQKGNAAQIKLLSRTV
SFAWIALIRAMRRIQGKGKPGEKIGGFRQVFADARKAGRITSDVYVASALIEHHCYNDPA
ATKILERGMKLFPEDEEFALEYLKHLIAKNDITNARAVFKTTVSRLAQKPETLSKAKPIY
SFFHEYESHYGELSQIQELEKRMSELFPEDPQLSHFSHRYSKPSFDPTAIRPIISPLTQA
RPKPPPGMEQPTQVPQPTAPAPQQQAPVTSVPPSVIDSPRPPPVQARDSPKRPFVPDDSD
NDSAVQPRKIARGESPLKGAAGRRLAAQQGRNIGRDGANSAQAGAPGSQPQTLPRDVNFL
LSIIPPAHTYNSARFIPERVIDVLRGVQLPQTWPPQHRIDPLRHISSGGPPMGQMPMNGP
GSYYR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatgacccccgagatggccttcctgcagtcgctgcagtccgatgccgccgcc
ttcggcaatggcagcgagccgccgccgcaccaggacgacgcccagcagcaggactcgcag
caggccgagccggccgaggacgacgaagacgacgactacgacccgtccgccctgatgccc
gacacggccgcctacgaccccagcgccccgcccatggcgccgcagaccgcccagtcgacg
ccgacgccgtcgcagcccgcctcgcaggccccgtcgcgcaccgcgtcggccgcgcccgac
cagaagacccaggccaagccgccgcgcacaatgggtgggtttgtcgttgatgacgaggac
gatgaggatgagtcccccgtcgcaaaagcagctggtgctcagggagtgaagacccacgcg
gctgccgctgctgccgccgccgcccagccgtcagcaaaggcgcgcctaccgcaggaccgc
atcggcattcttgaagacaggattcagggggacccgcgcggcgacttggacgcctggctg
agtctaatcaacgagtaccggcggcgcgacaagctcgacgaagcccgcggcgtctacacg
cgcttcttcaagatcttcccgcacgcggccgagcaatgggtgtcattcgcgaacatggag
ttgcaggctaacaacttctacggcgtggagcgcatattcgagcagtcgctcctccaggtg
cctcacgtcgaactgtggtccacttacctgacttacattcggagacgcaacaacctgaca
gcagaccctaccggcaccgctcgccagactgtttccatggcctatgacttcgttcttcag
aacgtcggcatggacaaggacgccggccagctttggcaagattacgtcgagttcatcgag
tctggtcccggaaatgttggcggaagcacttggcaggaccagcagaagatggaccttctg
cgcaaagcctatcagaaggcaatctgcgttccgactgacgcggttaccgcgctttggaag
cagtatgaccgctttgagatggggttgaacaaagtcactggccgcaagtttctacaggag
aagtcccctgcgtatatgactgctcgtagctcaatcgttgcattggagaacattaccagg
gaattgaacaggacgacccttgcgaagctgccccctgcccttggatttgacggtgatctt
gagtacatgaagcaggtcgaaatctggaagaagtggatcgcctgggagaaggaggaccca
ctggtgctgaaggaggaagaccctgctgcatttaagtctcgagtgatcttcgtttacaag
caagcacttatggctcttcgcttctggccggagatgtggtacgatgcatccgagtttgcc
ttccagaacgaccaggagcaggaaggcaacgattttcttgccaagggctgcgaggccaac
cctgagagctgcctcctcgctttcaagcgcgctgatcggattgaaattacttccacgaac
gaggagggtgaggatagccttgttcgccgtggcgagctcgttcgcgaaccgtatcagaag
gctctcgatgctctgtacgcattaatcaacaagacgaaggcccgcgaaacagacatggtc
aatcgcatcaaggatgcgtttgctcagcagactgacaacaataatgaggagggcgatgag
gatgacgaggaccaggaaagcaacggtgcttctaaggctaaggaagccgcacttcaggcc
cagatcgaggcgatacagaagggcaatgcagcacagatcaagcttctctccaggacagtc
tcattcgcatggatcgctctcatcagagccatgcgccggatacaagggaaaggcaagccg
ggtgagaaaattggtggtttccgtcaagtttttgccgatgctcggaaggccggacgcatc
acaagtgatgtgtatgttgctagtgctcttattgagcaccactgctacaacgatcccgct
gcaacgaagattctggagcgtggcatgaagctgttccctgaggatgaggagttcgccttg
gagtatctcaagcatctcatcgcaaagaacgacattaccaacgcacgtgctgtcttcaag
accacggtcagcaggttagcgcagaagcctgagacgctctcgaaagccaagcctatatat
tccttctttcacgagtacgagtctcattatggagagctcagccagatccaagagctcgag
aagcgcatgtcagaactcttccccgaggaccctcagctttcgcacttctctcaccgctac
tccaagccttccttcgatccgactgccatccgtcccatcatctcacctctcacgcaagca
agaccgaagccacctccgggcatggagcagccaacacaagtgcctcagccaacggccccg
gcaccacagcaacaagctcctgttacttccgttcctccctccgtcatcgactccccccgt
cctccgcctgtccaggcacgcgactcacccaagcgtcccttcgttcctgatgactcggac
aacgactcagccgtgcagccgcgcaagattgcccgcggcgaatcgccgctcaagggcgct
gccggtcggcgcctggccgcgcagcagggccgcaatattgggcgtgatggcgccaacagt
gcgcaggcgggcgccccgggatcgcaaccgcaaacactcccgcgcgacgtcaactttctc
ctcagcatcattcctcccgcacatacgtataactcggcaaggttcattcctgagcgagtc
atcgacgtgctgcgcggagtccagctgccgcagacttggccgccacagcaccgcatcgac
ccgctccgccacatttctagcggggggccgccgatgggccagatgccgatgaacggtcct
ggctcttactaccgttaa
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integrated database retrieval system
