Neofusicoccum parvum: UCRNP2_1950
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Entry
UCRNP2_1950 CDS
T03126
Name
(GenBank) putative small nuclear ribonucleoprotein lsm8 protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
npa
Neofusicoccum parvum
Pathway
npa03018
RNA degradation
npa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRNP2_1950
09123 Folding, sorting and degradation
03018 RNA degradation
UCRNP2_1950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_1950
03041 Spliceosome [BR:
npa03041
]
UCRNP2_1950
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UCRNP2_1950
mRNA degradation factors
5'-3' decay
Lsm complex
UCRNP2_1950
Spliceosome [BR:
npa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
UCRNP2_1950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-ProteinID:
EOD51272
UniProt:
R1EUI5
LinkDB
All DBs
Position
Unknown
AA seq
98 aa
AA seq
DB search
MSLQGYINKKICIITVDSRTLVGTLLSCDQMTNLVLSDTWERIVRPADDPEPSQEVQHGL
YLIRGDNVALCGLVDEELDASIDWTKVRGEVIGTTKHV
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccaaggctacatcaacaagaaaatctgcatcatcacggtggacagccggacg
ctggtcgggacgctgctgtcgtgcgaccagatgacgaacctggtgctgtcggacacctgg
gagcgcatcgtgcggccggccgacgacccggagcccagccaggaggtgcagcacgggctg
tacctgatccgcggcgacaacgtcgcgctgtgcggcctggtcgacgaggagctggacgcg
agcatcgattggacaaaggtccggggagaggtcatcggcacgacgaagcatgtgtga
DBGET
integrated database retrieval system
