Neofusicoccum parvum: UCRNP2_2389
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Entry
UCRNP2_2389 CDS
T03126
Name
(GenBank) putative transcription initiation factor iif subunit protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
npa
Neofusicoccum parvum
Pathway
npa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
UCRNP2_2389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npa03021
]
UCRNP2_2389
Transcription machinery [BR:
npa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
UCRNP2_2389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-ProteinID:
EOD50836
UniProt:
R1GRF8
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All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSASPAGPPGSTPTGARTSNTPNGSAPPGLRRPPKPKANPLVQPKKKRIGSKPAGQPGAK
PPGPSSNGQAQQPKPAPSSNLYEEFKPPPGLETQVKTTPVFTTKRALLEGLRHHIIKFQS
KHPIDPTDQAEFTRPIRLHRRDAALGASGAGADSGGEGEENDEEVKERLRIEALKEERRR
NREEIQAQIAPKAKGRTFVDNKKKIQQVYERNDTPQSIKASRLRYEETLPWHLEDFDNKN
TWVGAYEAALSDCHVMMFNEPQVNPQTGQVTERYRMVPIEKWYKFSAKDKAVTMSVEDIE
KQEKGGFALSRWALQPQGTKKSAVPKWMREKEAEKELKKMAEDSAMRSKGLFLRSAGRGD
EEEVKARRPDDDDWMKNDAAPDADVIDYDEKEDFADDEEGVNGLFEGDEETTKDAEDRIK
REQLSANFFANKDDTDVWKQEEEEALEAELKKKLEKSLRKKIVKREKNYNYDVDDSDENP
YSEESDSEDSEAERQKEEERKREEEKAAAEKGKGKAGETTEKTTSGTSTKGSNTPSNRPK
TTDPLKTSSQALKRPGSPNLSEQSGNESSRKKQKKFGGSAGSDSDATDSGKPLASRVKPS
AGSQAPTPGGSRAAHTAAASFGPPPSVEEIRAIIPPEGASMSRLISKFKGRFKQGSESQH
QFIANVKAAGQYDKASKMIFRKP
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctcgcccgctgggcctccgggctccactcccaccggcgcccgcacgagcaac
accccgaacggcagcgccccgcctggtctccgccgcccgccgaagccaaaggccaacccc
ctggtccagccgaagaagaaacgcataggcagcaagcctgctggccagcccggcgcaaag
ccgcccggtccctcttcgaacggccaagcacaacagccgaagcctgcgccctccagcaac
ctctacgaggaattcaagccgccgcctggcctcgagacacaggtcaagacgactcccgtg
tttaccaccaagcgcgccctccttgagggccttcgccaccacatcatcaagtttcaatcg
aagcaccccatcgacccaaccgaccaggccgagttcacccgtcctattcgcttgcaccgc
cgcgacgccgccctcggagcgtcgggagctggagcggattccggtggcgaaggcgaggaa
aatgacgaggaagtcaaggagaggctgaggatagaagctctgaaggaggaacggcgtcgg
aaccgcgaggagatacaggcccagattgcccccaaggcgaagggaaggactttcgtggac
aacaagaagaagatacagcaggtgtatgagcgcaacgacactccgcaatccatcaaggct
tcgcgcttgcgttacgaggagactttgccttggcatctggaggactttgacaacaagaac
acctgggtcggcgcatacgaggctgccttgtcagattgccatgtcatgatgttcaatgag
ccgcaagtcaatccgcagactggacaagtcactgaacgctaccgcatggtgccgattgag
aagtggtacaagttttctgccaaggataaggctgtcactatgtcggtcgaggatattgag
aagcaggagaagggtggttttgccctatctcgctgggctcttcagcctcaaggcaccaag
aagagtgctgtgcccaagtggatgagagagaaggaggccgaaaaagagctcaagaagatg
gcagaagacagtgccatgaggtcgaagggtctcttccttcgtagtgccggccgtggagac
gaggaggaagtcaaggcgcgccgtccggacgatgatgactggatgaagaacgatgcagcc
ccggatgcagacgtcatcgactacgacgagaaggaagactttgccgatgacgaggagggt
gtgaatggtctgtttgagggagacgaggagactaccaaggatgctgaagataggatcaag
cgtgagcagctgtcggcgaacttcttcgccaacaaagacgacacagacgtgtggaagcag
gaagaagaagaggctctagaggccgaactgaagaagaagttggagaagagtctccgcaag
aagatcgtgaagcgcgagaagaactacaactatgatgtggatgacagcgatgagaatccc
tactcggaagaaagcgattctgaagattcggaagcggagcgccagaaggaagaagagcgt
aagcgcgaggaggaaaaggcggcagctgaaaagggcaagggaaaggctggtgaaacaaca
gagaagaccacgtccggtacctctactaaaggcagcaacacaccgtcaaaccgcccgaag
accaccgatccgctcaagacatcatcgcaggccctcaagcgtcctggctctccaaatctt
tccgagcaaagcggcaatgagtcgtcacgcaagaaacagaagaagtttggtgggtcagca
ggcagcgatagcgatgctaccgacagcggcaagcccttggcctcccgcgtgaagccttcg
gcaggctctcaggcacctactcctggaggcagccgtgcagcccacacagcagcagcaagc
tttggccctccgccttccgtcgaagaaatccgcgcaatcattccacccgagggcgccagc
atgtcacgtttgatctccaagttcaagggccgcttcaagcagggcagcgaaagccaacac
cagttcattgctaatgtcaaggcggccggtcaatatgacaaggcttcgaagatgatattc
cgaaagccgtga
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