KEGG   Neofusicoccum parvum: UCRNP2_2829
Entry
UCRNP2_2829       CDS       T03126                                 
Name
(GenBank) putative dna polymerase epsilon catalytic subunit a protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
npa  Neofusicoccum parvum
Pathway
npa03030  DNA replication
npa03410  Base excision repair
npa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:npa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    UCRNP2_2829
   03410 Base excision repair
    UCRNP2_2829
   03420 Nucleotide excision repair
    UCRNP2_2829
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:npa03032]
    UCRNP2_2829
   03400 DNA repair and recombination proteins [BR:npa03400]
    UCRNP2_2829
Enzymes [BR:npa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     UCRNP2_2829
DNA replication proteins [BR:npa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    UCRNP2_2829
DNA repair and recombination proteins [BR:npa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      UCRNP2_2829
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-ProteinID: EOD50401
UniProt: R1GQ63
LinkDB
Position
Unknown
AA seq 2195 aa
MPPRRAGQPFRRLGKNGNTSYGPRKGGPRTVDASTLRSSEATSQNEKLEATRLANSIDET
FGFSRYESGKRKAGWLFNMHSTTIEDENHPGGRAGVDYYFIGDDGEDYFKATVAYDPYFL
VAIKRGKEAEVEEWLKRAFEGLVKNVSKVEKEDLKMPNHLLGYRRTFLKITFVNVPDLLA
VRKSLLPIADTNKKKMNAMDTYAEVASANAGFDIFDDDQDYERRPNGFVDASDFIVDIRE
YDVPYHVRVAIDLDIRIGKWYWVEAKHGTTTLSCIEDRLTRADPVVMAYDIETCKAPLKF
PDSSIDSIMMISYMIDGQGFLITNREIVSEDIADFEYTPKPEYEGPFMIFNEPDEKAMIE
RFFEHIKIARPTVMVTYNGDFFDWPYVEARASILGIDMYQEIGFRKNSEDIYQSDHCCHL
DAFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASEKPQILAEYSVSDAVA
TYYLYMKYVHPFIFSLCTIIPLGPDDVLRKGTGTLCEMLLMVQAYEKEIVLPNKHAAPRE
AFWDGHLLESETYVGGHVESIEAGVFRSDIPVNFALDSAAFQQLIDELDAALKFSITVEE
KKSMDDIVNYDEVKEQIAERLRILRDTPNRHEKPSIYHLDVASMYPNIMTTNRLQPDSMV
TEADCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYNMIRNALENERFPGKRPGTTRPF
QELSLDEQAAMIKKRLQDYSKKIYHKIHESTTLQRESIICQRENPFYVDTVSTFRDRRYD
FKGKQKVWKGKTDALKSSGASAAEIDEAKKMIILFDSLQLAHKVILNSFYGYVMRKGSRW
YSLEMAGITCFTGASIIQMACQLVERIGRPLELDTDGIWCILPATFPENFAFKMKNGKKV
AISYPCVMLNHRVHDKFTNHQYQDLKDPATFRYETRSDNSIFFEVDGPYRAMILPTSKEE
DKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFKFFLEGTTLQETYDAVAK
VANQWLDVLYSQGTTLADEELIDLICENKSMTKTIEEYGGAKTTAITTARRLAEFLGEQM
IKDKGLNCKYIISSQPRHAPVTERAIPVAIFSAEESVKKYFLRKWLKSDPGDCDPRTITD
WNYYLERLGSVIQKLITIPAALQKVRNPVPRVAHPDWLERRIRIKDDIFKQKKMTDMFEK
KALTDIDANVVNKKMADLEDFGGSQVGKPKKGTVTKMVQKRKAPEPAAPTDPYASLPSKM
PSITEDYQGWLKYQKQKWKIQKQQRIRRRQLFGEKRADASDGLGTLFRNQAESLYMNTWQ
LLQLREGDLPGEVKMFVLIDKKVHVIKIVVPRQVYLNLRGDDLPDVSIEGCNVEKVVNHT
LPNGHPSVHLFKLTLPEQTYVTEAKNLNLLFNHPSVEGVYETQVPLNVRAMLELGSICTF
DETQRGVLGKGLEQGFDLSALRRVPNQQPYLTQNPLGYLYLHHIIAGDRQIFALFSSNKE
QAHVVVLNRSRDVQGLPNLDKIYKEHFAARLQESEGQPWQETFEYQAAIHFKTVQVTTKR
KAHLEVADAIKKMRNDESKPIVLVVRAENQKLLAHDIPILKDMPVLPLQADEADKQLPPL
GWQSFVARRLVDHYLDLGTWIAHLIGLARYGDIPLCNLERDDPRFLIDISYARRLQKEKV
VLWWSEGPKPDHAGYEKDDILGPLETVEMPSINNPGTYSSVCIDLEIKNLAISTVLSSSI
INEAEGSDSVSFNPAAPTEDQPSDGSNVIYSDNAFASAGILVLREMVKAWWAEAEKGSYM
ADVMVQHLVRWVECPGSFLYDRALHYYVQMMSRKALQQLMSDFRRVGSHVVFASANRLLL
QTTKAEVGNAYAYSQYILKTVHAKPLFQSLDLQIKEYWDYLAWYDEFNYGGKGCREVVEA
ENQTLDTIMCWHFATFLPAALQPVFNDWVVEFIELMHARKRPQQHITTSTENGTVQVEST
PRMTQLPFRPLTQDPTDAPTTVLTKTFTKPLTKEIAALLRRQHQEALHAELAPDWMFPSL
PGTNPDVAASLTNPTLQLVKCLTQVLSLDKSINLEARLLRKDLLRLFDVREFSADAAFAN
PAASLWVRGLVCDECTAVRDVDLCRDGALVGTSTSAAAGEGGAAAAAASLNLACPSCRAP
HDPARLEQRLAADVQALALKWCTQDSKCGKQVRTT
NT seq 6588 nt   +upstreamnt  +downstreamnt
atgcctccccgccgcgctggacagccgttccggcggttaggcaagaatggcaacacttca
tacggaccacggaaaggcggccccagaacagtggatgcgtctacccttcgtagcagcgag
gcaacctcccaaaatgagaagctcgaagccacgcgcctcgccaacagcatcgacgagacc
tttggcttttcgcgctacgagtctggaaagagaaaggccggctggctgttcaacatgcac
agtactacgatcgaggacgaaaatcaccccggaggccgcgcgggagtggactactacttc
atcggcgacgacggcgaagactacttcaaggcgaccgtggcatacgacccctactttctg
gtggcaataaaaagagggaaggaagcagaggttgaggagtggttgaagcgcgctttcgag
ggcctagtgaagaatgtatccaaggtcgagaaggaggatctcaagatgccgaaccatctt
ctgggttaccggaggaccttcttgaagattacattcgtcaatgttccggatctgctggcg
gtgcggaagtcgctactaccaattgcggacaccaacaagaagaagatgaatgcgatggat
acatatgcggaggtcgcaagcgccaatgcgggcttcgacatttttgatgacgaccaagat
tacgagagacgacctaatggatttgtagacgcgagtgatttcattgttgacatccgagag
tacgatgtgccataccacgttcgagttgccattgatctggacatccgcatcggaaaatgg
tactgggtagaggcgaagcacggcacaacgacactgagctgcatagaagatcgattgacg
cgtgccgaccctgtggtcatggcatacgatatcgaaacctgcaaagcccctctgaaattc
cccgactcttcgattgactcaatcatgatgatttcctacatgatagatgggcagggtttt
cttataaccaacagggagatcgtctccgaggacattgcggatttcgaatataccccaaaa
ccagagtacgagggaccgttcatgattttcaacgagccggatgagaaagctatgatcgag
aggttttttgagcacatcaaaatcgcaaggccgacggtcatggtcacgtacaacggtgac
ttcttcgattggccttacgttgaagcccgagcgagtatccttgggatcgacatgtaccag
gagatcggcttccggaaaaacagcgaagatatctaccaatcagatcattgctgtcatctg
gatgccttcgcatgggtcaaccgtgacagttacctgcctcaaggaagccgtggcttgaaa
gcagttacagtcgccaagcttggatatgacccagacgagctggacccggaactcatgact
ccctatgcttccgaaaagcctcagattctcgccgaatactcagtatcagacgccgtcgca
acctactacctgtacatgaaatacgtccatcctttcatcttttcgctctgcacgatcatt
cctctcggccccgacgacgtattacgaaaaggaacgggtactctgtgtgagatgttgctt
atggtccaagcttacgaaaaagagattgtgctccctaacaagcacgcggcgcccagagag
gctttctgggatggtcatcttctcgagtctgagacgtatgttggtggacacgtcgaaagt
atcgaggcaggtgtgtttcgaagcgacatacctgtgaattttgctctcgactcagcagcg
ttccaacaactcatcgatgagttggatgcggcactgaagttcagcatcaccgtcgaagaa
aagaagtccatggacgacatcgtcaactacgatgaagtcaaggagcagatcgccgaaaga
ctcaggattttgagggacacccccaacagacacgaaaagccttcgatttaccatttggat
gtcgcatccatgtaccccaacatcatgacgaccaaccgtctgcagccagattccatggtc
acggaagcagactgcgctgcatgcgacttcaacaggcccggcaagacttgcgatcgacgt
ttgccttgggcgtggagaggagaatacttgccagcaaaaagggacgaatacaacatgatt
cggaatgcactggagaatgagagattcccaggaaaaagaccaggcacgacaagaccattc
caagaactctcgctggacgaacaagctgccatgatcaagaaacggttgcaggactacagc
aagaagatttaccataagatccacgagtccaccacattgcaacgggagtccatcatttgc
cagcgcgaaaatcctttctacgtcgacaccgtcagtaccttccgtgatcggcgttatgat
ttcaagggcaaacaaaaggtatggaagggaaagacggatgcactgaagtcgtctggcgcc
agtgcggccgagatcgatgaagccaagaaaatgattattctgtttgactcgttgcagctt
gcgcacaaagtcatcctgaacagtttttacggttacgtcatgagaaaaggttctcgttgg
tattctctggagatggctggcatcacttgtttcacgggcgccagcatcattcagatggct
tgccagcttgtcgagaggatagggagaccgctggagctggacacggatggtatctggtgt
atcctgccagcaaccttcccggagaacttcgcattcaagatgaagaatggcaaaaaggtc
gccatttcttacccttgtgtcatgttgaaccaccgagtccacgacaaattcaccaaccat
caataccaggacctgaaagacccggccaccttccgttacgagacgcgcagtgacaacagt
atcttcttcgaagttgatggaccatacagggccatgatcctgcccacatcgaaggaagag
gacaagaacttgaagaagcgttatgctgtgttcaaccacgatggtagtctggctgagttg
aaggggttcgaagtgaagagaagaggagagttgaagctcatcaagatctttcaaacgcag
atcttcaagttcttcctcgagggaactacgctccaagaaacctacgacgccgttgccaaa
gtagccaatcagtggctagatgtcctttactcgcagggaaccacgcttgcagatgaggaa
ctcatcgacctcatttgcgagaacaaaagcatgaccaagaccatagaagaatacggcgga
gcgaaaaccaccgccattaccactgccagacgattggccgagtttttgggagaacaaatg
atcaaggacaaaggcttgaactgcaagtacattatttcttctcagccgaggcatgccccc
gtcacggaacgtgccattccagtcgccatcttctctgccgaggagtcggtcaagaagtac
ttcttgcgcaagtggttgaagtctgatccgggtgattgtgatccaaggaccattacggac
tggaactattacctcgagcgtcttgggtcagtcatccagaagctcattaccatacctgcc
gcccttcaaaaggtccgcaaccctgtgccccgcgttgcgcaccctgactggcttgagagg
agaatccggatcaaggacgacatcttcaaacagaagaagatgacagacatgttcgagaag
aaagccttgaccgacatcgacgccaatgtggtcaataagaagatggctgatctggaggat
ttcggagggtcgcaagtgggcaagcccaagaagggaacggtgactaagatggtgcagaag
cgcaaagctccggaacctgcagcacctacagatccctatgcaagcctgccttcaaagatg
ccttccatcaccgaggactatcaaggctggctcaaatatcagaagcagaagtggaagatc
cagaagcagcagagaatccgaaggcgccagctgttcggcgaaaagcgcgcagatgcttct
gatgggctggggactttgttcaggaaccaggccgagtcgctctacatgaacacatggcaa
ctactgcaattgcgcgagggcgatttgcccggcgaggtcaagatgttcgtgctgattgac
aagaaggtccatgtcatcaagattgtggtcccccgacaggtctacctaaatctgcgcggc
gatgatctacccgatgtgtcgatcgaaggttgcaacgtggagaaagtcgtcaaccacact
cttccgaacggtcacccttctgtccaccttttcaagctgacgttgcctgagcaaacctac
gtcaccgaagcaaagaacctcaatctcctcttcaaccatccaagcgtggaaggtgtgtat
gagactcaggtgccgctgaatgtccgcgcaatgctcgagcttggtagcatttgcaccttt
gatgagacccagcgcggtgttctcggaaagggtctcgagcaaggattcgatctctcggcc
ctccggcgagtacccaaccagcagccctacctcactcagaatcctctgggctatctctac
ttgcatcacatcatcgctggagaccgacagatctttgctcttttctcgagcaacaaggag
caggcacatgtcgtcgttcttaaccgatccagagatgtgcaaggtctcccgaatctcgac
aagatctacaaagaacacttcgcagcccgccttcaagaatccgaaggccagccctggcaa
gagaccttcgagtaccaggctgctatccacttcaagacggtccaggttactacaaagcgg
aaagcgcacctcgaggttgcggacgcgatcaagaaaatgaggaacgatgagtccaagcct
attgtattggttgtgcgcgcagagaatcagaagctgcttgcccatgacatcccgatcctc
aaggacatgccagtgctaccgctccaggctgatgaggccgataagcagctccctcccctg
ggttggcagtccttcgtcgcgagacgcctggttgatcattaccttgatctcgggacctgg
atcgcacacctcattggattggctcgatacggcgacattccgctctgcaacctggaaaga
gacgatccccgtttcttgatcgacatctcctatgccaggcgcctgcaaaaggaaaaggtc
gttctctggtggtcagaagggcccaaaccagaccacgccggctatgagaaagacgatatt
ctcggccctcttgagactgttgagatgccttcgatcaacaacccgggaacttactcttcg
gtgtgtatcgacctcgagatcaagaaccttgccatcagcaccgtactctcgtcgtcaatc
atcaacgaagctgaggggtctgattccgtctccttcaacccagcagcaccaacagaagac
cagccaagcgatggatcgaacgtcatctactccgacaacgctttcgcatctgctggcatt
ctggttcttcgggagatggtcaaagcttggtgggcggaggcagagaagggcagctacatg
gcagacgtcatggttcaacatctggttcgctgggtagagtgcccgggctcgttcctctac
gaccgcgcattgcactactacgtgcagatgatgtcacggaaggcgctgcagcagctgatg
tcggacttccggcgtgtgggctctcatgtagtcttcgcaagtgcaaaccggcttctcctg
cagacgactaaggcggaagtcggcaacgcgtacgcgtacagccagtacattctgaagact
gtgcatgcgaagcccttgttccagagcctggacctgcagatcaaggagtactgggattac
ctagcatggtatgatgagttcaactatggcggcaaaggttgccgcgaggtcgtcgaggcg
gagaaccagacgcttgacactatcatgtgctggcatttcgcaactttcctcccagcagct
ctgcagccagttttcaacgactgggtcgtcgagttcatcgaactaatgcacgctcggaaa
cgaccacaacagcacatcaccacctccacagagaacggcaccgtgcaagtagagtcgact
cctcgaatgactcagctacccttccgccctctaactcaagacccaaccgatgcaccgacc
acagtcctcaccaagaccttcaccaagcccctgacaaaagaaatagccgctctcctccgc
cgccaacaccaggaggcactgcacgccgaactcgcgcccgactggatgttcccctcgctg
cccggcaccaaccccgacgtcgcagccagcctgaccaacccaacgctccagctcgtcaag
tgcctcacgcaagtcctcagcctcgacaagagcatcaacctcgaggcgcgcctgcttcgc
aaagacctgctccgcctcttcgacgtgcgcgagttcagcgccgacgccgccttcgccaac
ccggccgccagcctgtgggtgcgcggactcgtctgcgacgagtgcaccgccgtgcgcgac
gtcgacctctgccgcgacggcgccctcgtcggcaccagcacctcggccgcggcgggcgag
ggcggcgccgccgccgccgccgcgtcgctgaacctggcttgccccagctgccgcgcgccc
cacgatccggcccgcctggagcagcgcctcgccgccgacgtgcaggcgctggcgctcaag
tggtgcacccaggactccaagtgcgggaaacaggtccgcacaacttaa

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