Neofusicoccum parvum: UCRNP2_3447
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Entry
UCRNP2_3447 CDS
T03126
Name
(GenBank) putative tho complex subunit 5 protein
KO
K13174
THO complex subunit 5
Organism
npa
Neofusicoccum parvum
Pathway
npa03013
Nucleocytoplasmic transport
npa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRNP2_3447
09122 Translation
03013 Nucleocytoplasmic transport
UCRNP2_3447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_3447
03041 Spliceosome [BR:
npa03041
]
UCRNP2_3447
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
UCRNP2_3447
Spliceosome [BR:
npa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
UCRNP2_3447
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Ketoacyl-synt_2
GCN5L1
Motif
Other DBs
NCBI-ProteinID:
EOD49795
LinkDB
All DBs
Position
Unknown
AA seq
265 aa
AA seq
DB search
MSAADIITDPDLRAVLDAATLAQQQCDALLALLAQNPLPPKTSPSDAALALPPDVAEGVS
TAQKTLHAHLAAVRNQNRKALLSVRATKHATADARHEVDTLHLALQNLYYEQRHLESEIK
ACQDYDHPFQKLPLMPEHDFREQFPDVVEGCREVAAKAVAGKKDAEAKGEDEGAEDVGMG
EDEDGELAAFEEEVWEDALMKARIEHEHKERLALEEKRQGLLKRKQGLIAENNKRKEDLA
KLDESLEKFIEVGKHLFFPGVGHGR
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccgacatcatcaccgacccggacctgcgcgccgtcctcgatgccgccacg
ctggcccagcagcaatgcgacgcgctgctcgcactgctggcccaaaacccactgcccccc
aaaacgagcccttctgacgccgccctcgccctcccgccggacgtggccgagggcgtgtcg
acggcccagaagacgctgcacgcgcaccttgccgcggtgcgcaaccagaaccgcaaggcg
ctgctgagcgtgcgcgcgaccaagcacgccaccgccgacgccaggcacgaggtcgacacg
ctgcacctggcgctgcagaacctgtactacgagcagcgccacctcgagagcgagatcaag
gcctgccaggactacgaccacccgttccagaagctgccgctcatgcccgagcacgacttc
cgcgagcagttccccgacgtggtcgaggggtgcagggaggttgcggcgaaggcggtggcg
gggaagaaggacgcggaagcgaagggcgaggatgagggagcggaggacgtgggaatggga
gaggatgaggacggcgagctggcggcgtttgaagaggaggtgtgggaggatgcgttgatg
aaggcgaggatcgagcatgagcacaaggagaggttggcgctggaggaaaagagacagggg
ctgctgaagaggaagcagggcttgatcgcagagaacaacaagaggaaggaggatctagcg
aagctagacgagagcttggagaagttcatcgaggtgggcaagcatctttttttcccgggc
gttggccatgggcgctga
DBGET
integrated database retrieval system
