KEGG   Neofusicoccum parvum: UCRNP2_3560
Entry
UCRNP2_3560       CDS       T03126                                 
Name
(GenBank) putative u5 snrnp complex protein
  KO
K12857  Prp8 binding protein
Organism
npa  Neofusicoccum parvum
Pathway
npa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:npa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    UCRNP2_3560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:npa03041]
    UCRNP2_3560
Spliceosome [BR:npa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    UCRNP2_3560
 Complex C
   U5 SnRNP specific factors
    UCRNP2_3560
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_IFT122_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR19_1st eIF2A Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 PQQ_2
Other DBs
NCBI-ProteinID: EOD49658
UniProt: R1EPD3
LinkDB
Position
Unknown
AA seq 357 aa
MSSEKRPAADSFGSNQLVKRQRSENELGNEVAITNSSAGNGALIQAVPRTSGLQAPIMEL
TGHSGEVFATRFDPTGQHIASGSMDRNILLWRTYGQCENYGILSGHKGAVLDLHWSRDSR
VIFSASADMMLASWDLETGQRIRRHVGHEEVINCMDVSKRGEEMLVSGSDDGYIGIWDPR
QKEAVDFIETEFPVTAIALAEAGNELYTGGIDNDIKVWDMRKKAVAYSLLGHTDTITSLQ
VSPDSQTLLSNSHDSTVRTWDIRPFAPTDRHVKTYDGAPTGMEKNLLKASWDPKGQKIVA
GSGDRTVVVWDANTGKLLYKLPGHKGAVNDVRFSPRDEPIVLSGSSDGMLVLGELGK
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgtcttcagaaaagcgcccggctgccgactctttcggctccaaccagctcgtgaagagg
cagcgttctgagaacgaactgggcaacgaggtggccatcacgaacagctccgcagggaat
ggcgctctcattcaagctgtgccgcgcacgagcgggctgcaagctcccatcatggagctt
acaggacattccggcgaggtcttcgcgacaagattcgacccgactggccagcacatcgca
tccggctccatggatcggaacatcctgttgtggcgaacatacggccaatgcgagaactat
ggcatcctgagcggacacaagggcgctgttctggacctgcactggtcgcgcgactctcgc
gtcatcttttcggcttcggcagacatgatgttggcaagctgggatcttgagactggtcag
aggatacggaggcacgtaggacacgaagaggttatcaattgcatggatgtgagcaagcgc
ggagaggaaatgctggtcagcggttcggatgacgggtacatcgggatctgggatccgaga
cagaaggaggccgtcgacttcatcgagaccgagttccccgtcaccgccatcgccttggca
gaagctggcaacgagctgtacaccggcggcatagacaacgacatcaaagtgtgggacatg
cgcaagaaggccgtcgcatattcgctgctgggacacaccgacaccatcacgtctctgcag
gtttctccggattcgcagacgcttctgtccaactcacatgactccactgtcaggacctgg
gacatccggccatttgcgcccacagaccgccacgtcaagacgtacgacggagccccgacg
ggcatggagaagaacctgctaaaggccagctgggacccgaagggtcagaagattgtggct
ggaagcggtgaccgcactgtcgtggtctgggatgcgaacactggcaagctgctctacaag
cttccgggacacaagggagccgtcaacgacgtgagattttcgcctcgtgacgagccaatc
gttctttctggttcatcggacgggatgctcgttcttggagagcttggcaagtga

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