Neofusicoccum parvum: UCRNP2_3745
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Entry
UCRNP2_3745 CDS
T03126
Name
(GenBank) putative transcription elongation factor spt4 protein
KO
K15171
transcription elongation factor SPT4
Organism
npa
Neofusicoccum parvum
Pathway
npa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
UCRNP2_3745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npa03021
]
UCRNP2_3745
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_3745
Transcription machinery [BR:
npa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
UCRNP2_3745
RNA polymerase I system
UCRNP2_3745
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
UCRNP2_3745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
EOD49498
UniProt:
R1EP12
LinkDB
All DBs
Position
Unknown
AA seq
123 aa
AA seq
DB search
MASRSYVTPSQHRHLRACMVCSFVQPANKFRQQGCPNCEFLEMQGADEAHIADCTSAVFE
GLIALADPGQSWVAKWQRLDGYVPGMYATKVSGILGEEQLAACEAAGVKYIPRDGSEQED
IEA
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgcgctcctacgtcacgccctcacagcaccggcacctgcgcgcctgcatggtg
tgcagcttcgtgcagccggccaacaagttccggcagcaaggctgccccaactgcgagttc
ctcgagatgcagggcgccgacgaggcccacattgccgactgcaccagcgccgtcttcgag
gggctcatcgccctggccgacccgggccagagctgggtcgccaagtggcagcgcctcgac
ggctacgtgcccggcatgtacgccacaaaggtttctggcattcttggcgaggaacaactg
gctgcatgtgaagcagcaggcgtcaagtatatcccgcgtgatggcagcgagcaggaagac
atcgaggcatga
DBGET
integrated database retrieval system
