Neofusicoccum parvum: UCRNP2_3874
Help
Entry
UCRNP2_3874 CDS
T03126
Name
(GenBank) putative chromatin remodelling complex atpase chain isw1 protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
npa
Neofusicoccum parvum
Pathway
npa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
UCRNP2_3874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npa03021
]
UCRNP2_3874
03036 Chromosome and associated proteins [BR:
npa03036
]
UCRNP2_3874
Transcription machinery [BR:
npa03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
UCRNP2_3874
Chromosome and associated proteins [BR:
npa03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
UCRNP2_3874
RSF complex
UCRNP2_3874
WICH complex
UCRNP2_3874
B-WICH complex
UCRNP2_3874
NORC complex
UCRNP2_3874
BRF complex
UCRNP2_3874
NuRF complex (fruit fly)
UCRNP2_3874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
AAA_14
CHDII_SANT-like
Occludin_ELL
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
EOD49355
UniProt:
R1GCP5
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MAPSRSRVSELASAADVSMVDAADVTDDYTPDPQDTPDYTDSDSNLNTATPSEAGDIPID
GRRRRSEALQLRKSVLGKKHDRLGESKEDDSIRRFRYLLGLTDLFRHFIDSNPNPRIKEI
MAEIDRQNEEEAQRALKGHARKGGAGGDRRRRTEKEEDAELLREEKHGGAGDLTIFRESP
PYVQGVMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFIGYLRFIRGINGPHL
VAVPKSTLDNWKREFARWIPEINVLVLQGAKEERQQLISERLVDEGFDVCITSYEMILRE
KSHLKKFAWEYIIIDEAHRIKNEESSLAQIIRVFNSRNRLLITGTPLQNNLHELWALLNF
LLPDVFGDSEAFDQWFSGQQEDQDTVVQQLHKVLRPFLLRRVKSDVEKSLLPKKEVNLYI
GMSDMQVQWYKKILEKDIDAVNGAGGKKESKTRLLNIVMQLRKCCNHPYLFDGAEPGPPY
TTDEHLVQNAAKMVMLDKLLKRMQAQGSRVLIFSQMSRLLDILEDYSVMRGYQYCRIDGS
TAHEDRIAAIDDYNRPGSEKFLFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDR
AHRIGQTKQVMVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQQPAKNAQSKDELLN
MIQHGAEKVFQSQGGTGVFGDGATDDDIDAILKKGEERTAELNAKYEKLGIDDLQNFTTD
SAYEWNGENFVHKKKEIGISWINPSKRERKEQSYSMDKYYRQALMTGGRTADTKPKIPRA
PKQIQIHDYQFFNPRLGDLQDKETAWYRKENNIKAPLQEGTEEDLEARVREQELEQTEID
NAESLTDAEKEEKDRLAAEGFADWNRRDFQQFINGSAKYGRKNYKAIEDEVDGKTAEEIE
EYAKVFWKKYREIANYEKYITAIEEGEDRLKKIERQRQLLRKKLSMYRAPLQQLKLNYSV
STTNKKVYTEEEDRFLLVMLDKYGVDTEGIYDRIRDEIRESPLFRFDWFFLSRTPVEISR
RCNTLLTTVVREFDGDGAKPTNGTAKGKRGAEDEEEEESEDDTPAKKKAKNGVKNKALDN
VRGGSKSASASASRASSVVSNGSAKGSKAKGKKK
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggcgccctcgcgcagtcgcgtctctgagctcgcctcggccgccgacgtgtccatggtc
gacgctgcggacgtgaccgacgactacacccccgacccgcaggatactcccgactacacg
gactccgactcgaacctcaacaccgccacacccagcgaagccggtgatatacccatagat
ggccgcaggcgccgctccgaggctttgcagcttcgcaagagcgtgttgggcaagaagcat
gaccgtctaggcgagtccaaggaagatgactctattcgtcgattccgttacctgctgggt
cttacagacctgttccgccacttcattgactcaaacccgaacccccgcatcaaagagatt
atggccgagatcgaccgccagaatgaggaagaggcacagagagctttaaagggacacgcg
cgcaagggcggcgctggtggcgatcgtcgcaggagaactgaaaaggaggaagacgcggag
ctgctgcgcgaggagaagcatggtggcgctggcgacctgaccattttccgcgagtcgcct
ccgtacgtccaaggcgtgatgagggactaccagattgccggtctcaactggttgatctcg
ctgcacgagaacggtatctccggtatcctggctgacgagatgggtctgggcaagacgctg
cagaccatttccttcattggctacctccgcttcatccgtggcatcaacggaccccacttg
gtcgccgtacctaaatctacactcgacaactggaagagggagtttgcaaggtggatcccg
gagattaacgttttggttcttcagggtgcaaaggaagagcgccagcagctcatcagtgag
cgcctcgtggacgaaggcttcgacgtctgcatcaccagttacgagatgatcttgcgcgag
aagtcacatttgaagaagttcgcatgggagtacatcatcattgacgaggcgcaccgcatc
aagaacgaggagtcttcactcgcccagatcattcgtgtcttcaactcccgcaaccggttg
ctgatcaccggtacccccctccagaacaacctgcacgagctctgggccctcctcaacttc
ctcctacctgatgtgttcggcgactccgaggcctttgaccagtggttttctggccagcag
gaagatcaagacactgtcgtccagcagctccacaaggtccttcgccccttcctgctgcgc
cgtgtcaagagcgacgtcgagaagagtttgttgccgaagaaagaagtcaacctgtacatt
ggcatgtcggacatgcaggtccagtggtacaagaagatccttgagaaggatatcgatgcc
gtcaacggtgctggcggtaagaaggagtcaaagacccgtcttttgaacattgtcatgcag
ctcaggaaatgttgcaaccacccatacttgttcgacggagcggaacccggacctccctac
actaccgatgagcatctggttcaaaatgcagctaagatggtgatgctcgacaagctgctg
aagcgtatgcaggcgcagggcagccgcgttttgatcttctctcagatgagccgtcttctg
gacattttggaggattactctgtcatgagaggatatcagtactgccgtattgacggttct
actgctcacgaggatcgtatcgctgccatcgacgattacaacagacccgggtcggaaaag
ttcttgttcttgcttaccactcgtgccggtggtcttggaatcaacctcacgactgcagac
atcgtcatcctctttgatagcgattggaaccctcaggccgatttacaggccatggatcgt
gctcatcgtattggtcagacgaagcaggtcatggtgttcagattcgttaccgagaatgca
atcgaggaaaaggtccttgaacgcgcggcacagaaactgcgactcgatcagctcgtcatt
cagcaaggccgtgctcagcagcctgccaagaatgctcagtccaaggacgaactactgaac
atgattcagcacggtgccgagaaggtcttccagtcccagggcggcaccggtgtctttggc
gatggtgcaactgatgatgatattgatgccatcctaaagaagggtgaggagcgtactgcg
gagctcaatgcgaagtacgagaagctgggcattgatgacttgcaaaacttcacgactgac
tcggcgtacgagtggaacggcgagaattttgttcacaagaagaaggaaattggcatcagc
tggattaacccctcaaagcgtgagaggaaggagcagtcctactctatggacaagtactat
cgccaggctttgatgacgggaggtcgcacagcggacacgaagcctaagattcctagggcg
cctaagcagatccagattcacgactaccaattcttcaatccccgtctgggcgatttgcag
gataaggagactgcatggtaccgcaaggagaacaacatcaaagcacctcttcaggagggt
actgaggaggacttggaggctcgcgtccgggagcaggagcttgagcagacagagatcgac
aatgccgaatctctgaccgatgctgaaaaggaggagaaggatcgtctggcagccgagggt
ttcgccgattggaacaggcgtgatttccagcagttcatcaacggctcagccaagtatggc
cggaagaactataaggctatcgaagacgaggttgatggcaagacggcggaggagattgag
gagtacgccaaagtcttctggaagaagtacagggaaattgccaactatgagaagtacatc
acggccattgaggaaggcgaggatcgtctcaagaagattgagcgtcagcgtcagctcctc
cgcaagaagttgagcatgtaccgggcgcctcttcagcaactcaagctcaactactcggtc
tcgacaacgaacaagaaggtctacacggaggaggaggaccgtttcttgcttgtcatgctg
gacaagtacggtgtcgatacagagggcatctacgacaggattcgtgatgagatccgcgag
tccccgctcttccgcttcgactggttcttcctcagccgtacccctgttgagatcagccgc
cgctgcaacacgctgctcacgactgtggtcagggagtttgatggcgatggtgctaaacct
accaatggtactgccaaggggaagaggggcgcagaggatgaagaggaggaggaaagcgag
gatgacactccagccaagaagaaggccaagaatggcgttaagaacaaggcacttgacaac
gttcgcggcggcagcaagtcggcttctgcctcggcttcccgtgctagcagcgtggtgtcc
aacggatcagccaagggctccaaggccaaaggcaaaaagaaatga
DBGET
integrated database retrieval system
