Neofusicoccum parvum: UCRNP2_3924
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Entry
UCRNP2_3924 CDS
T03126
Name
(GenBank) putative clathrin heavy chain protein
KO
K04646
clathrin heavy chain
Organism
npa
Neofusicoccum parvum
Pathway
npa04142
Lysosome
npa04144
Endocytosis
npa05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
UCRNP2_3924
04142 Lysosome
UCRNP2_3924
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
UCRNP2_3924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npa04131
]
UCRNP2_3924
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npa04147
]
UCRNP2_3924
Membrane trafficking [BR:
npa04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
UCRNP2_3924
Exosome [BR:
npa04147
]
Exosomal proteins
Proteins found in most exosomes
UCRNP2_3924
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
TPR_Vps41
TPR_IF140-IFT172
TPR_COPA_B
Clathrin-link
ARM_TT21_5th
Motif
Other DBs
NCBI-ProteinID:
EOD49327
UniProt:
R1EP46
LinkDB
All DBs
Position
Unknown
AA seq
1678 aa
AA seq
DB search
MAPLPIKFSELLQLSQVDILQPTSIGFNSCTLESDSYICVRQQADQTASPEVIIIDLKNG
NNIIRRPIKADSAIMHYNKQIIALKAQQRTLQIFDLAQKAKLKSATMNEDVVFWKWYSES
SLGLVTENSVYHWNIFDPSQATPVKIFDRNPNLSGCQIINYRVNQEEKWSVIVGISQQQG
RVVGAMQLYSRDRGISQNIEGHAAAFGNLRMEGAPADTKVFTFAVRTATGAKLHVVEIDH
QAGNPTFAKKAVDVYFPPEATNDFPVAMQVSQKYNVIYLVTKYGFIHLYDLETGTCIFMN
RISSDTIFVTAPDSDSAGIIGINRKGQVLSVTLDENTVIPYLLQNPANAELAYRLASRAG
LPGADNLYQQQFENLLASGQYAEAAKTAANSPRGFLRTAQTIERFKQAPPQQGQLSVILQ
YFGMLLDKGKLNQFETLELVRPVLQQGRKHLLEKWLGEGKLECSEQLGDIVRLHDLNLAL
TIYQQAGSSQKVVAALAELGRFDEILPYAKQSGYTPDFTVLLQHIVRVNPEKGAEFATAL
AKEESGPLIDIDRVVDIFQSQGMVQQCTAFLLDVLAPNLPEQGHLQTKLLEMNLLNAPQV
ADAILGNEMFSHYDKPRIAQLCENAGLLTRALEHNDDPAAIKRIIIHTDKLPEEWLINYF
GHLTVELSLDCLDEMLKVNIRQNLQSVIRIAQKYSDLLGPTRIIDLLEKYRTAEGLFYYL
GGIVNLSEDKDVVFKYIEAATAMGQLNEVERICRENNFFDPEKVKNFLKEARLTEQLPLI
IVCDRFNFIHDLVLYLYKQQQFKSIEVYVQRVNPSRTPAVIGGLLDVDCDENIIKSLLQS
VNPASIPIDELVSEVETRNRLKLLLPFLEATLASGNQQQAVYNALAKIYIDSNNNPEKFL
RENDQYDTLTVGKYCEARDPNLAFIAYQKGQNDLELITITNENSMFKAQARYLLERSDPE
IWDYVLSSNNLFRRSVVDQVIATAVPESQEPDKVSVAVKAFIGNDLPGELIELLEKIILE
PSAFSDNPTLQNLLMLTAAKSDKGRLIGYIQQLEHYTPDDIAAQCIELGMYDEAFEIHKK
HNNHLEAVNVLVDHIVSIDRAQEYADRVDLPEVWSKVAKAQLDGLRVTDSIESYIRAQDP
SNYNEVIEIATHAGKDEDLIKFLKMARKTLREPPIDTGLAFCYARTNQLAELEDFLRATN
VADVEASGDKAYEEGYHEAAKIFFTSISNWAKLATTLVHLEDYQAAVECARKANSTKVWK
QVNEACVAKKEFRLAQICGLNLIVHAEELSDLVKQYERNGYFDELIALLEAGLGLERAHM
GMFTELGIALSKYHPERVMEHLRLFWSRINIPKMIRACEEAHLWPELVFLYVHYDEPDNA
ALAMMERAADAWEHHSFKDTIVKVANLEIYYRALNFYLQEQPSLLTDLLQALTPRIDVNR
VVRMFEKSDNIPLIKPFLLNVQTQNKRAVNNAINDLLIEEEDYKTLRDSVENYDNYDAVE
LAQRLEKHDLVFFRQIAANIYRKNKRWDKSIALSKQDKLFKDAIETAAMSGKPEVVEELL
RYFVDIGSRECYVGMLYACYDLIRPDVILEVSWRNGLNDFTMPYMINFLAQQAATIEQLK
KDNEERKAKEKSQQTNDENTPILGPSRLMLTQGPSAPSPAPYGQANGIAPQATGYRAF
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgctccccattaagttctccgagctgctccagctgtcgcaagtcgacatcctc
cagcccacctcgataggattcaactcatgtacccttgagtccgactcgtacatctgcgtc
aggcagcaggccgaccagactgcatcgccggaagtcatcataatcgacctcaagaatggc
aacaacatcatccggcggcccatcaaggccgacagcgccatcatgcactacaacaagcag
atcatcgcgttgaaggcccagcagcggacactgcagatcttcgacctggcgcagaaggcg
aagctgaagtcggccacgatgaacgaggacgtcgtgttctggaaatggtacagcgaatcg
agcctgggcctcgtcaccgagaactccgtgtaccattggaacattttcgatcccagccaa
gccacgccggtcaagatcttcgaccgcaaccccaacctctcgggctgccaaatcatcaac
taccgcgtcaaccaggaggagaagtggtccgtcattgtgggaatctcccagcagcagggc
cgtgtcgttggagctatgcagctctactccagagatcgcggcatcagccagaacatcgag
ggccacgctgctgcctttggcaacctccgcatggaaggtgctcccgccgacaccaaggtg
tttacttttgccgtgaggactgccactggcgcaaagctgcacgtggtggagatcgaccac
caggccggcaatcctacgttcgcgaagaaggccgttgatgtctacttcccgcctgaggcc
actaacgacttccctgtagccatgcaggtttcgcagaagtacaacgtcatctacctggtc
accaagtacggcttcatccacctgtacgacctggagacgggcacctgcatcttcatgaac
cgcatttccagcgacacaatcttcgttaccgctcccgattccgactctgcgggcattatc
ggcatcaaccgcaagggccaggtcctgtccgttactctcgacgagaacaccgtgataccc
tatttgttgcaaaacccagccaacgccgagctggcatacagattggcctcgcgggcgggt
ctcccaggcgccgacaacctataccagcagcagttcgagaacctcttggcctccggccag
tatgctgaggcggccaagacggcggccaactctccgcgaggctttcttcggacggcgcag
acgatcgagcgattcaagcaagcccctcctcagcaaggccagctgtcggttatcctacaa
tactttggtatgcttttggacaagggcaagctgaaccaattcgagacgctggagctggtg
cgtccggtgctgcagcaaggacgcaagcaccttctggagaagtggctgggagagggcaag
ctggagtgctcggagcagcttggtgatatcgtcaggctgcacgatctcaacttggctttg
accatctatcagcaggctggttcgtcccagaaggttgtagctgcgctggcggagctcggc
cgttttgacgagattctcccgtacgctaagcagagcggttacactcccgactttaccgtc
ttgcttcagcacattgtgcgtgtcaatcctgagaagggcgctgagttcgcgactgccctt
gccaaggaagagagcggtcctttgatcgacattgaccgtgtggtcgacattttccagtct
cagggcatggtccaacaatgcactgctttcctgcttgatgtccttgcgccaaacctccct
gaacagggtcacctgcagacgaagctgctggagatgaacctgctgaacgccccccaggtt
gcagacgctattcttggcaacgagatgttctcgcactacgacaagccccgcattgcacag
ctgtgcgagaatgctggcttgttgacgagggctctggagcacaatgatgatccggctgct
atcaagcgcatcatcatccacacggacaagcttcctgaggagtggctgatcaactatttc
ggacacctgactgtcgagctctccttggactgtctggacgagatgctcaaggtcaatatt
cgccagaacttgcaatccgtcattcgcatcgctcaaaagtactcggatcttcttggcccg
acccgcatcattgacctcctggagaagtaccgtaccgcagagggtcttttctactacctt
ggcggcattgtgaacctcagcgaggacaaagatgtcgtcttcaagtacattgaggctgct
accgccatgggccagctcaacgaagtcgaacgcatttgccgcgagaacaactttttcgat
ccggagaaggtgaagaacttcctcaaggaggctaggctgactgagcagctcccgctcatc
atcgtctgcgaccgcttcaacttcatccacgatttggttctgtacttgtacaagcagcag
cagttcaagtctattgaagtctacgtccagcgcgtaaacccctccaggactccggctgtc
attggtggccttcttgacgtcgactgcgacgagaacatcatcaaaagtctgctgcagtcg
gtcaaccctgcttcgattcccatcgatgagcttgtttccgaagtcgagactcgcaaccgc
ttgaagctcctcctgcctttcctcgaggctaccctggcgagtggtaaccagcagcaggct
gtctacaacgcgctcgccaagatctacatcgacagcaacaacaacccggagaagttcctt
cgtgagaatgaccaatacgacactctcaccgttggtaaatactgtgaggctcgtgacccc
aacctggccttcattgcgtaccagaagggccagaacgatctcgagctcattactatcacc
aacgagaactccatgttcaaggcccaggccagatacctgctggaacgctctgaccctgag
atttgggactacgtgctcagctcgaacaacctcttccggaggtcagttgtcgaccaagtc
atcgccactgctgtgccagagtctcaggaacctgacaaggtttccgtcgctgttaaggcc
ttcatcggaaacgaccttcctggcgagctcattgagctcttggagaagatcatcctggaa
ccgtccgctttcagcgacaacccgaccctgcagaacttgttgatgctcacggccgccaag
tccgacaagggtcgcttgattggttacatccaacagctcgagcactacactcccgatgat
attgccgcgcagtgtatcgagctgggcatgtatgacgaggcttttgaaatccacaagaag
cacaacaaccatctcgaggcagtaaatgttctcgttgaccatatcgtcagcattgaccgt
gcacaggagtacgctgaccgggttgatttgcccgaggtttggagcaaggtcgccaaggcc
cagctcgacggcctccgtgtcacggactccatcgaatcgtacattcgtgctcaggatccg
tcgaactacaacgaggtcatcgagattgccacgcacgcaggcaaggatgaagacctgatc
aagttcttgaagatggcccgtaagaccctgcgcgagcctccgatcgacactggtctcgcc
ttctgctacgccaggaccaaccagcttgctgagctggaggatttcctgcgtgccaccaat
gtggccgatgttgaggcttctggtgacaaggcttacgaggagggctaccatgaggctgcc
aagatcttcttcaccagcatctccaactgggccaagcttgctacgactctggtgcacctc
gaggactaccaggctgccgttgagtgcgcccgcaaggctaacagcactaaggtctggaag
caggtcaacgaggcctgcgttgcgaagaaggagttccgtcttgctcagatctgcggtctt
aacttgatcgttcacgctgaagagctctcagatctcgttaagcagtacgagaggaatggt
tacttcgacgagctcattgctcttctggaggccggccttggcttggagcgtgcccacatg
ggcatgttcaccgagctcggtattgctctgtccaagtaccaccctgagcgcgtaatggag
cacctccgtctcttctggtcccgcatcaacatcccgaagatgatccgtgcctgcgaggaa
gcacacctttggcccgaacttgtcttcttgtacgtccactacgacgagccggacaatgct
gcgctcgccatgatggagcgtgcggcggatgcatgggagcatcactcgttcaaggacacc
attgtcaaggttgcaaacttggaaatctactaccgcgcgctgaacttctacctccaggag
cagccatctctgctcactgatcttctccaagcgctgactcccaggatcgacgtcaaccgt
gttgttcgcatgttcgagaagtcggacaacatccctctcatcaagccgttcctgctcaac
gtgcaaacgcagaacaagagggccgtcaacaacgccatcaacgatcttctgatcgaggag
gaggactacaagacgctccgcgactccgtcgagaactacgacaactacgatgcggtcgag
ctggcacagcgccttgagaagcacgacctcgtcttcttcagacagatcgctgccaacatc
taccgcaagaacaagcgctgggacaagtctatcgcactgtccaagcaggacaagttgttc
aaggatgccatcgagacggcggccatgtctggcaagccggaagttgtcgaagagctcctc
cgctattttgtcgacattggcagccgcgagtgctacgttggtatgctttacgcttgctac
gacctgatccgtccggacgtgattctggaggtgtcttggcgcaacggcctcaacgacttc
accatgccgtacatgatcaacttcttggcgcagcaggcggcgacgatcgagcagctcaag
aaggacaacgaggagcgcaaggcaaaggaaaagtctcagcagacgaacgacgagaacacg
ccgatactcggaccgtctcgcctcatgctgacgcaaggcccgagcgcgccgtcaccggcg
ccgtatggccaagccaatggcatcgcgcctcaggccacgggctaccgcgcgttctag
DBGET
integrated database retrieval system
