Neofusicoccum parvum: UCRNP2_4085
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Entry
UCRNP2_4085 CDS
T03126
Name
(GenBank) putative tbp associated factor protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
npa
Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npa03021
]
UCRNP2_4085
Transcription machinery [BR:
npa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
UCRNP2_4085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
Vac14_Fab1_bd
ResIII
HEAT_Maestro
DUF5113
Motif
Other DBs
NCBI-ProteinID:
EOD49176
UniProt:
R1GLG9
LinkDB
All DBs
Position
Unknown
AA seq
1847 aa
AA seq
DB search
MREMHVGSLSHLIRNTAAQQLADIQKQHPEELFNLLTRAIGGIVENAEKFDPNEEDDPIK
SETNGNGHSNGAVKKEEEIELPPLSEDQLQLETLDIPMILKNGKHLLGSAGREYDFKLAA
MDPAERLAYQKKSLKARLGIGGDYMDEDIVTQDDIAAPANSRSSMPPPTPGVGLHKLDTS
VSRQNSISSPNQNTAVSPGGDNAAQTPVDENGHALSKRQLNALKRKNKMHLKGQANKVRV
IDLSTRRPSHDYPQTPAEPHPVKTEVKSEEEATESKVKDYFSLERHGDDDDSKVVQEFKG
APPPEKSTIQTEEEEQGLEWPYDRLCEILTVDLFDPNWEIRHDNVVAPIRETAGQTLGAV
LQYLSSDLVRAVYTVLYRLVMQDEFNEKRVWQACHGGMIGMRYLVAVRNDLLLTDPSLMD
GVLSAVMRGLGDFDDDVRAVSAATLIPVAKEFVNLRPAALNQLIGIVWDCLSNLSDDLSA
STGSVMDLLAKLCSFTEVLDAMKLNAAQDPEQSFTHLVPRLFPFLRHTITSVRSAVLRAL
LTFLDIEGEGTKGWINGKALRLIYQNLLVERNEPVLKLSLQVWNKLLEVLAAEGPDAFAN
EFQPHIDPLVTLTVHPIGVSRHPIPMDPTLFIRPSGQSYAPNGHAARRISPVSGPPSEGQ
PKKRRRVEKHKEKETPPPSAHNIDAPMMEGDVDLVGADTIIRSKIYAAQALGKAMALWPQ
SSRKGVFGPRLLPQLKSIFSTSQLTTCMISEEFAKASGAEKDELSQDLVKALRSMVEDER
PICYGDLTSYLTIVRAQCQSLLNTFRDLGHIAPAKLPQLAVIVQGEPDASQYAFSIADGE
KIVGPDFDRLKKALTPASRVAATQPLVAAQQDVQHAIDESKAVKQERDIRIKAASAAAVV
AFREIPKKPALTIKGMMDSVKNEENQELQKRSAAAVAILVDHVAASGKRVIVEKVVGNLV
KFCCMETAETPEFHVNADVEVGILSLKKEEDIRDHPDAAKFEREAKAARITRRGAKEALE
QMVSNFGNQLFERIPILRFLIEEPIKLAFTNDELPGDITNPDNVLGQEVVDGLSTLRALV
GKFHPDLHTFVLDLLPLIAKALQSKLSVLRYAAAKCFATICSVMTVQGITMLVEKVLPTI
NNPVDVHYRQGAIECIYHLIHVMEDGILPYVIFLIVPVLGRMSDSDNDVRLIATTTFATL
VKLVPLEAGIPDPPGLSEELLKGRDRERKFIAQMLDAKKVEPFDIPVAIKAELRSYQQDG
VNWLAFLNRYHLHGILCDDMGLGKTLQTICIVASDHHNRAEEYKKTESPDVRRLPSLIVC
PPTLSGHWQQEIRTYAPFLSPVAYVGPPTERAKVRAQLAEADIVITSYDICRNDIEVLAP
LNWNYCVLDEGHLIKNSKTKTTFAVKRLISNHRLILTGTPIQNNVLELWSLFDFLMPGFL
GSEKVFQDRFAKPIAASRFSKSSSKEQEAGALAIEALHKQVLPFLLRRLKEEVLDDLPPK
ILQNYYCDLSDLQRRLFEDFTKKEGKTIAEKATSSDKDSKQHIFQALQYMRKLCNSPALV
MKPEHKQYQGIQDYLAKSGSKLSDPAHAPKLTALRDLLLDCGIGASPSDGADHGEIPAAS
EAVSPHRALIFCQMKEMLDMVQDTVLKKMLPSVQFMRLDGGVEASRRQEIVNKFNSDPSY
DVLLLTTSVGGLGLNLTGADTVIFVEHDWNPQKDMQAMDRAHRIGQKKVVNVYRIVTRGT
LEEKILSLQRFKIDVASTVVNQQNAGLGTMETDQILDLFNLSTDGADMSNPGGANNDTIH
EDDAVDATGEVREKGKKGFLDELGELWDERQYQEEFDLDNFLATMKG
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaatgcatgttggatcgcttagtcacctcatccggaacactgccgcccagcag
cttgccgacatccagaagcagcatcccgaggagcttttcaaccttctcaccagggccatc
ggcggcatcgttgagaacgccgagaagtttgaccctaacgaagaagatgaccccatcaag
tccgagaccaacggcaacggccactccaatggcgccgtcaaaaaagaagaggaaatcgag
ctgcctccgctctccgaagaccagctgcagcttgagactctggacatccccatgattctc
aagaacggcaagcaccttctcggcagtgctggtcgtgagtatgacttcaagctcgccgcc
atggatcccgcagaacgcctggcctaccaaaagaaaagcctgaaggcccgtctcggtatc
ggcggtgattacatggacgaggacatcgtcacccaggatgacattgccgcgcctgcaaat
tcaagatcaagtatgccgcctcccacgcccggcgtcgggttgcacaagctcgacacgagc
gtatctcgccaaaacagcatatcatctccaaaccaaaacacggccgtatcacccggtggt
gacaatgccgctcaaactcccgtcgatgagaatggccatgcgctcagcaagcgacaactt
aacgctcttaagcgcaagaacaagatgcacctcaagggacaagcaaacaaggtccgcgtc
attgacctttcgacacgtaggccaagccatgactaccctcaaacacccgcagagccccac
cctgtcaaaacggaggtcaaaagcgaagaggaggccaccgaaagtaaggtcaaggactac
ttctccctagaacgccacggcgatgacgatgacagcaaggtcgttcaagagttcaagggc
gctccaccacccgagaagtcgacaattcagacagaggaagaagaacagggtctagagtgg
ccctatgataggctatgtgagatcctgaccgtggatctcttcgaccccaactgggagatc
aggcacgataatgtcgttgcccccatccgagagactgcaggtcagacgctcggtgcggta
ctacaatacctttcttccgaccttgtccgggccgtctacacggtcctctaccgcttggtg
atgcaagacgaattcaatgagaagcgcgtctggcaggcttgccacggtggcatgatcggc
atgaggtacttggttgccgtgcggaacgatctgctcctgacagatccgtccctcatggat
ggtgtcctgagcgcagtcatgcgggggctcggcgatttcgacgacgatgtccgtgcagtc
agtgctgcaacactgattccagtcgccaaagaattcgtcaatctcaggcctgctgccctg
aaccaactcattggcatcgtctgggactgtctgtctaacctcagcgatgacctcagcgcc
agcaccggatcggttatggaccttcttgcgaagctctgcagcttcactgaagtcctggat
gcgatgaaactcaacgctgcccaggacccggagcagtcattcacgcatctcgttcctcgt
ctgttccctttcctccgccacaccatcaccagcgtgcgctctgctgtcttgcgcgctctt
ctcactttcctcgacattgaaggcgagggcaccaagggatggatcaacggcaaggctctc
agactcatttatcagaacttgctcgtcgagcgtaacgagcctgttctgaagctttctctc
caagtctggaacaagctcctcgaagttcttgctgccgaaggcccggatgcatttgcaaac
gagttccaaccgcatattgatcctttggtcacactgacggttcacccgattggcgtatct
cgtcaccctatccctatggaccccactctcttcatcagaccttctggtcagtcgtacgcg
ccgaacggccacgctgcccgcagaatatcaccagtctcgggacctccttctgaaggtcag
ccgaagaagcgccgcagggtggagaagcacaaggaaaaggaaaccccaccaccttccgca
cacaacatcgatgctcccatgatggagggcgatgtggatcttgtcggagcagacacaatc
atccgctccaagatttatgcagctcaggctctgggtaaggccatggctttgtggccccaa
tcatcacggaaaggcgtcttcggcccaaggcttctgccgcagttgaagtccatcttctcc
acctcgcagctcaccacgtgcatgatcagcgaggagttcgcgaaggcttccggggcagag
aaggacgaactgtcacaagacctcgtcaaggccctccgttccatggtcgaagatgaacgg
cctatctgctatggagatctcacgagctacctcacgattgtgagggcgcagtgccaatct
cttctcaacaccttccgcgacctaggacatatcgctcctgcaaagctgcctcagctagcc
gttatcgtgcagggtgaaccagatgcgagccagtacgctttctcaattgctgatggtgag
aagattgtcggtccggatttcgacaggctcaagaaggccttaacaccagccagtcgtgtt
gcggcaactcagccgctggttgccgcccagcaagatgtacagcacgccatcgatgagtcc
aaggctgtgaagcaagagagggacatccgcatcaaagctgcctcggctgccgcagttgtc
gcgttccgggaaatcccgaagaaacccgccttgaccatcaagggtatgatggacagtgtc
aagaacgaggaaaatcaggaactccagaaacggtccgccgccgcagttgctattctcgtc
gatcatgttgccgccagcggcaagcgcgttattgtcgaaaaggtcgttggaaatcttgtc
aaattctgctgcatggagacggctgaaactccggagttccatgtcaatgccgatgtggaa
gttggaatcctgtcgctcaagaaggaggaggacatcagagatcacccggatgcggccaaa
tttgagagggaggccaaggcagctcgtatcacgaggcgcggcgcaaaagaggccctggag
caaatggtgtccaactttggcaaccagctgtttgagaggattccgattctgcgcttcctt
atcgaagagccgatcaagctggcgttcaccaacgatgaactgccaggtgacatcacgaac
cccgacaacgttctgggccaggaagttgtcgatggcctctcgaccctgcgagctctggtc
ggcaaattccaccctgacttgcacactttcgttctggacctcctaccgctcatcgcaaag
gcactgcagtccaagctttcggtacttcggtatgccgctgcgaagtgctttgccacaatt
tgtagcgtcatgaccgtccaaggcatcacgatgcttgtcgagaaagtcttgccaaccatc
aacaatccggtcgatgttcactaccgacagggagccattgaatgcatctaccatctcatc
catgtcatggaggatggcattctgccctacgtgattttcctcattgttcctgtcctgggc
cgcatgagcgactccgacaatgacgttcgcctgattgcgactacgaccttcgcgacgctc
gtcaagcttgtgcctctcgaagcaggtatccctgacccgccaggcctctcggaggagctt
ctgaagggtagggatcgtgagcggaagttcattgcccaaatgctggacgcgaagaaggtc
gaacctttcgacattccggtcgctatcaaagcagagctccgctcctaccagcaagatggt
gttaactggcttgccttcctcaaccgttaccacttgcacggcattctttgcgacgatatg
ggtcttggaaagactctgcagaccatttgcatcgtggcaagtgaccaccacaaccgtgcc
gaggagtacaagaagaccgaatcgcccgatgtccgccgcctgccttctctgatagtctgt
ccacctacgctgtctggtcactggcaacaagagattcgcacatacgctccattcctgagc
cctgtggcttatgttggaccacctacagagcgtgccaaggtccgcgcccaactcgcagag
gccgatattgttatcacttcttacgatatttgccgaaatgatatcgaagtattggcgcct
ctgaactggaattactgcgttctcgacgaaggccatctgatcaagaacagcaagacgaag
actacgtttgctgtcaagcgcctcatctccaaccaccgtctcatccttaccggtactcct
atccagaacaatgttcttgagctttggtctttgtttgacttcctcatgcccggtttcctt
ggcagcgagaaggtcttccaagatcgtttcgctaagccaattgccgcttcgcgcttctcc
aagtcatcctccaaggagcaagaagccggtgctttagctatcgaggctctgcacaagcaa
gtcctaccattcttgctgcgtcgtctgaaggaagaagtcttggacgaccttcctcccaag
atcctgcagaactactattgcgacctgtccgacctgcagcgcaggctctttgaggatttc
acaaagaaggagggcaagacgattgccgaaaaagctacgagcagtgacaaagacagcaag
cagcacatcttccaggcccttcaatacatgcgcaaactgtgcaattcaccggcgcttgtc
atgaagcccgagcacaagcagtaccagggcatccaggattaccttgctaagagcggcagc
aaactcagcgacccggcgcatgcgcctaagctcactgctctgcgggacctgttgcttgac
tgcggcatcggcgcttcaccgtcggacggtgcagaccatggtgaaatccctgcggcgtcc
gaggccgtttctcctcaccgtgccctcattttctgccagatgaaagagatgttggacatg
gtgcaggacactgtgctcaaaaagatgttgccttccgtccagttcatgcgcctcgatgga
ggcgttgaagcgagtcgccgccaggaaatcgtcaacaagttcaactcggatcctagctac
gatgtcttgttgctcaccactagcgtcggtggtctgggtctcaacttgacgggtgcagac
acggtcattttcgtggagcacgattggaacccgcagaaggacatgcaggccatggaccgc
gctcaccgcatcggccagaagaaggtcgtcaacgtgtaccgcatcgtcacgcgcggcacg
ctcgaagagaagattctaagccttcagcgcttcaagatcgatgtcgccagtaccgtggtc
aatcaacagaacgctggtctaggcacgatggaaacagaccagatcctcgacctattcaat
ttatcgaccgacggtgcagacatgtccaatccgggaggcgccaacaacgataccatccat
gaagacgatgccgtcgacgccactggcgaggtcagagagaagggcaagaagggcttcctc
gacgagttgggagaactctgggatgagcgccagtaccaggaggagttcgatctggacaac
ttcttggcaacaatgaagggttaa
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integrated database retrieval system
