Neofusicoccum parvum: UCRNP2_4156
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Entry
UCRNP2_4156 CDS
T03126
Name
(GenBank) putative atp-dependent rna helicase dbp2 protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
npa
Neofusicoccum parvum
Pathway
npa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRNP2_4156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npa03041
]
UCRNP2_4156
03009 Ribosome biogenesis [BR:
npa03009
]
UCRNP2_4156
Enzymes [BR:
npa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UCRNP2_4156
Spliceosome [BR:
npa03041
]
Complex A
U1 snRNP components
U1 related factors
UCRNP2_4156
Complex B
UCRNP2_4156
Ribosome biogenesis [BR:
npa03009
]
Eukaryotic type
Pre-60S particles
Helicases
UCRNP2_4156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
EOD49085
UniProt:
R1GBZ6
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MSYGGGYGGGYGGSRGGGGGGGGGGGYSNGYGGGGGGSNGYSNGGGSYGGSNGYSGGGGY
GGGGGGYGGGGYGGGGGDRMSNLGAGLKQQNWDISTLPKFEKSFYKEHPDVAARSQKEVD
DFRKEFQITIHGQDVPNPVTTFDEAGFPSYVMNEVKAQGFEKPTAIQSQGWPMALSGRDV
VGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQTEISKFGKSS
RIRNTCVYGGVPKGGQIRDLARGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRML
DMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQLASDYQTDFIQVNIGSMDLSANHRIT
QIVEVVSEFEKRDKMSKHLERIMDDKNNKVLIFTGTKRVADDITRFLRQDGWPALSIHGD
KQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVINYDYPNNSEDYVHRIGRTGR
AGAKGTAITLFTTENAKQARDLVQVLTESKQQIDPRLHEMARYGGGGGGGRGWGGRGRGG
HGRGGGGKFFRR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacggcggcggttacggcggtggatacggtggctcccgcggcggaggcggcggc
ggcggcggcggcggcggctacagcaacggatacggcggcggcggcggcggtagcaacggc
tactctaacggcggcggcagctacggcggtagcaacggatacagcggtggtggtggatac
ggcggcggtggtggtggctacggcggcggtggctatggtggcggcggcggtgacaggatg
tccaacctcggcgctggcctgaagcaacagaactgggacatcagcacccttcccaagttc
gagaagtcgttctacaaggagcaccccgacgttgctgcccgctcgcagaaggaggtcgat
gatttccgcaaggagttccagatcaccatccacggccaagatgtccccaaccccgtcacc
accttcgatgaggccggtttccccagctacgtcatgaacgaggtcaaggcccagggtttc
gagaagcccaccgctattcagtcccagggctggcccatggctctttctggacgtgacgtt
gtcggcatcgccgagactggttccggaaagactctcacctactgtcttcccgccatcgtc
cacatcaacgcacagcctcttctcgctcctggcgatggccccatcgtcttgattctcgct
cccacccgtgagctggctgttcagatccagaccgaaatcagcaagttcggaaagtcctct
cgcatcaggaacacctgcgtctacggtggtgtccccaagggcggtcagatccgtgatctc
gctcgcggcgtcgaggtttgcattgctactcccggccgtctcattgacatgctcgagtct
ggcaagaccaacctcaggcgtgttacctacctcgtcctcgacgaggctgaccgtatgctg
gacatgggtttcgagccccagatcaggaagatcatcggccagattcgccctgaccgtcag
acttgcatgtggtccgctacgtggcccaaggaggttcgccagcttgcttctgactaccag
accgacttcatccaggtcaacatcggttccatggatctctctgccaaccaccgcatcacc
cagattgtcgaagttgtctcggagttcgagaagcgtgacaagatgtccaagcacctggag
cgcatcatggatgacaagaacaacaaggtcctcatcttcacaggcaccaagcgtgtcgcc
gacgacatcaccaggttcctccgccaggacggttggcctgcgctctctattcacggtgat
aagcagcagaacgagcgtgattgggtcctgaacgagttcaagacgggcaagagccccatc
atggttgccacggacgtggcatctcgtggtatcgacgttcgcaacatcactcacgtgatc
aactatgattatccgaacaactcagaggactacgtgcaccgcattggtcgtactggtcgt
gctggtgcgaagggtaccgccatcaccctgttcacaacggagaatgccaagcaagctcgt
gacctcgtccaggttctcactgagtccaagcagcagatcgatcctcgtcttcacgagatg
gcccgctacggcggcggcggcggtggtggtcgtggttggggtggtcgtggacgcggtggc
catggccgtggtggtggtggtaagttcttccgcagatga
DBGET
integrated database retrieval system
