Neofusicoccum parvum: UCRNP2_4339
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Entry
UCRNP2_4339 CDS
T03126
Name
(GenBank) putative dna repair and recombination protein rad26 protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
npa
Neofusicoccum parvum
Pathway
npa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UCRNP2_4339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npa03036
]
UCRNP2_4339
03400 DNA repair and recombination proteins [BR:
npa03400
]
UCRNP2_4339
Chromosome and associated proteins [BR:
npa03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
UCRNP2_4339
DNA repair and recombination proteins [BR:
npa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
UCRNP2_4339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
EOD48903
UniProt:
R1EM90
LinkDB
All DBs
Position
Unknown
AA seq
1261 aa
AA seq
DB search
MPDPPSSDEDGLSSPPSSPKPDTDHLAEDDYPSPRVDKGKGRAEEISDADGFDTDGDADE
DEESRLKLLTTVRDQDDLERDIGRQADKMLTEQADERDNKRMHKTLMEKQRCATQLKKLE
ERLAGPGGSTIKNKVRQDITDMKARIGSLNEDIQQIENRIAERHQTGNVDDLLEVGGNRQ
QPNESRRDFLIRTGKITPFSKMARLPKTADNLGDILLDAELGEDMEEDDEDLDASFAPEG
PVSHRNLRRPGFADDLSETSSAVSKPDDRPAKRRKVKPNREEEDGSVSSSPAAGGSDDAF
EPEMDDKELAALGEAEEEFDGAEDDDDFDMTTPELKRKPKAKPVNSRKKQKPDSEDVDEE
EDLADLDDGVEAHYQARLNKWINDRSAARRKAIAKKTSDVSHEDDGKPEWQQPLPHISDT
VFHGGFKVPGDIYPNLFDYQKTGVQWLWELYSQQVGGIIGDEMGLGKTVQAISFVAGLHY
SGKLTKPVIVVCPATVMKQWVTEFHTWWPALRVSILHSSGSGMMDVKREREIERDLESRS
YNSNKKLTRSEKAAKKIVDRVKKDGHVLVTTYSGLASYGEFLIPTEWEYAILDEGHKIRN
PDSRVTIYCKELRTANRLILSGTPMQNNLVELWSLFDFVYPMRLGTLPEFRNQFENPIKF
GGYANASNLQVETAMQCAEILKETISPYLLQRFKIDVAADLPKKTERVLFCRLTVPQRQA
YEAFLKSEEMNSILDGKRQALFGIDILRKICNHPDLIHHKSEKHQSDPKYGTGTKSGKMQ
VVKELLQMWKRKGHKTLLFAQHRIMLDILEKFVRKVGNINFLRMDGSTNIKDRQDLVDRF
NNDPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVEIYR
LMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQLKDLHDLFTLGNPSEETETGTLFQ
GTETRFSPSPTGDGKPLTRPGDEMVNIFGIQRGEDWRGEVANAGPPKTDGEGNEDQPAGS
NKDERLMSTIFARSGVQSSVEHDSIIGSNSKKPRVGPDPTLIAKMAREKAEKAAQELARS
GEVARNVPAGTVTWTGEVGSAGRPPSPPPRPRGIGGSRGGIRGGRGGLGSSSVLAHLSAR
QGRDVPTANSAARRAAPPPSGRSTPINGARSSASSSRVGTPRPERKKDLEGTDLFKAIRD
FMRAHGGVVFTEMIKQQFQWQVGEGREKAEEFRAMLNRLAKLEKPAQGDGRGKWVLKGEW
R
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgccggatccgccatccagtgatgaagatggcctcagtagtcccccatcgtcacccaag
cccgacaccgaccaccttgctgaagatgactacccatcgccacgcgttgataaaggcaaa
ggaagagcggaggaaatatcggatgccgatgggtttgacacggatggagatgccgacgag
gacgaggaaagcaggctgaagctcctcaccactgtccgcgaccaagatgatttggagcgc
gacattgggcgtcaggccgacaagatgctcaccgagcaggccgacgagcgggacaacaag
cgcatgcataagactcttatggagaaacagcgttgcgccacgcagctgaagaagctggaa
gaacgccttgctggccccgggggttcgacaatcaagaataaggtcaggcaggatattaca
gacatgaaggctcgcattggcagcctgaatgaggatatacaacagatcgagaatcgcatt
gcggagaggcaccagactggcaacgtggacgaccttctcgaagtcggtggcaaccggcag
caaccaaacgaaagccgtcgtgatttcctcatccgcaccgggaagatcacgcctttctcc
aagatggctcgccttccgaagaccgccgacaacctgggtgacatactacttgacgctgag
ctaggcgaggacatggaagaggatgacgaggatttagacgcctcattcgcaccagaaggc
ccagtgtcacatcgtaatttgaggaggcctgggttcgccgatgacttgagcgagacgagc
tctgcagtctctaagccggatgatcggccagcaaaacggcgtaaagtcaagcccaatcgt
gaggaagaagatggttcggtgtcttctagtcccgcggcgggaggatccgacgatgccttt
gagcccgaaatggacgacaaagaattggccgcactaggtgaggcggaagaagagtttgac
ggtgctgaggacgacgatgacttcgacatgaccacgccagagcttaagaggaagcctaaa
gcgaagccagtaaattctaggaagaagcagaaacccgacagcgaggatgtggatgaggaa
gaagacttggccgatctcgatgacggggttgaggcgcattatcaagccagactcaacaaa
tggatcaacgaccggagcgctgcccgtcgaaaggcgattgccaagaaaacttcagatgtt
tcacatgaggatgacggaaagcctgaatggcaacagcctcttccgcacatttccgacaca
gtattccacggtggcttcaaggtccctggtgacatctacccaaatcttttcgattatcag
aaaactggggtccagtggctctgggagctgtacagccaacaagtaggtggcattattggt
gacgagatgggtttgggaaagaccgtccaagcaatttcctttgttgctggccttcactac
tctggaaagctcacaaaaccggtgattgttgtctgcccggctaccgtcatgaagcagtgg
gtcacggagttccacacttggtggcctgcgctgagggtctcaatcctgcacagttctgga
agtggcatgatggacgtgaagcgcgagagggaaatcgaacgggatctggagtcacggtct
tacaacagcaacaaaaagcttaccaggtccgaaaaggccgcgaagaagatcgttgacagg
gtcaagaaagatggacacgtgctggtcacaacatactctggccttgcatcctatggcgag
ttcctcattcccactgaatgggagtacgccattcttgacgagggtcacaagattcgcaat
ccggactcacgcgtcaccatctactgcaaggaacttcgaacagctaaccgcttgattctc
tctggcacaccaatgcagaataatcttgtagagctctggtccttgttcgattttgtttac
ccgatgcgcctaggaactctcccagaattccgcaaccagttcgagaaccctatcaagttt
ggaggatacgccaatgcatcaaaccttcaggtcgaaactgccatgcagtgtgcggagatc
ctgaaagagactatcagcccttacctactacaacgattcaagattgatgtcgcggctgac
ctgccaaagaagaccgaacgagtgctgttttgtcgcctgactgtgcctcaaaggcaggcc
tacgaagcttttctcaaatcggaagaaatgaactccatccttgatggcaagaggcaggcc
ctgttcggaatcgacatcctgcgtaagatctgcaaccatcctgatcttattcaccacaaa
tccgaaaagcatcaatccgatccgaagtacggaactggtaccaaatctggcaagatgcaa
gtcgtgaaggagctacttcagatgtggaaacggaagggacacaagactcttcttttcgct
cagcaccgcatcatgctggatattcttgagaaattcgtgaggaaggtcggcaatattaac
ttcttacggatggacggatcaacgaatatcaaggaccgccaagatcttgttgaccggttc
aacaacgacccggacttgcacgttttcctactgacgaccaaggtgggaggcctgggagta
aaccttactggcgctgatcgtgttattatctacgacccggactggaacccttctacagac
gtgcaagcccgcgagcgtgcgtggcgccttggtcagaagcgcgaggttgaaatatatcgg
ctcatgactgctggcacaattgaggagaaaatctaccaccgtcagatctttaagcaattt
ctaacaaacaagattctaagagatcctaagcagcgccaaaccttccagctcaaagactta
catgatttattcaccctcggcaacccaagtgaggagaccgaaactggcacactcttccaa
ggcaccgagacgcgtttctctccttctccgactggggatggcaagccactcacacggcct
ggggatgagatggtcaacatattcggcatccaacgtggcgaggattggcgtggtgaagtg
gctaatgctggccctccgaagactgatggcgaaggaaatgaggatcagcctgctggttcg
aacaaggatgagcgtctgatgagcaccatcttcgcgcgtagcggcgtccaaagctcagtc
gagcacgactccattattggtagcaacagcaagaagcccagggttggaccagatcccacg
ctgatagccaagatggctcgcgagaaggccgaaaaggctgcgcaagagctagctcgatcc
ggcgaagttgctcgcaacgtcccagccggcacggtcacttggaccggcgaggtcggctcc
gcaggccgtcctccatcacctccgccccgcccccgcggcatcggcggcagccgtggcggc
atccgtggtggtcgtggaggcctcggctccagctccgtcctcgcccacctgtccgcgcgc
cagggccgcgacgtccccaccgccaacagcgcagctcgccgcgccgcgcctcctccgagc
ggccgctccacgcccatcaacggcgcccgcagctccgcgtcttcgtcgcgcgtgggcacg
ccccgcccggagcgcaagaaggacctcgaaggcacggatctgttcaaggcgatcagagac
ttcatgcgcgcgcacggcggcgtcgtgttcacggagatgatcaagcagcagttccagtgg
caggtcggggagggcagggagaaggcggaggagttcagggcgatgctgaacaggttggcg
aagctggagaaaccggcgcagggagatgggagggggaagtgggttttgaagggggagtgg
aggtaa
DBGET
integrated database retrieval system
