Neofusicoccum parvum: UCRNP2_4723
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Entry
UCRNP2_4723 CDS
T03126
Name
(GenBank) putative cell cycle control protein
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
npa
Neofusicoccum parvum
Pathway
npa03040
Spliceosome
npa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRNP2_4723
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
UCRNP2_4723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npa03041
]
UCRNP2_4723
04121 Ubiquitin system [BR:
npa04121
]
UCRNP2_4723
03400 DNA repair and recombination proteins [BR:
npa03400
]
UCRNP2_4723
Enzymes [BR:
npa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
UCRNP2_4723
Spliceosome [BR:
npa03041
]
Complex B
Other components
Prp19 complex
UCRNP2_4723
Complex C
Prp19-CDC5 complex
UCRNP2_4723
Ubiquitin system [BR:
npa04121
]
Ubiquitin ligases (E3)
U-box type E3
UCRNP2_4723
DNA repair and recombination proteins [BR:
npa03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
UCRNP2_4723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WDR55
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
WD40_RFWD3
WD40_MABP1-WDR62_2nd
B-prop_COPA_B_2nd
eIF2A
Beta-prop_CAF1B_HIR1
Cytochrom_D1
WD40_like
Beta-prop_NUP159_NUP214
V_ATPase_I_N
NBCH_WD40
Beta-prop_DCAF4
U-box
Beta-prop_WDR11_1st
ATG16
HPS3_N
Beta-prop_WDR19_2nd
zf-Nse
Motif
Other DBs
NCBI-ProteinID:
EOD48521
UniProt:
R1GJQ6
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MLCAISGEAPQVPVASKKSGNVFEKRLIEAYVAEHGTDPVNGEELTTDDLVELKTQRTVR
PRPPTLTSIPSLLATFQNEWDAVALETYQLKQQLAQTRQELSTALYQHDAAVRVIARLTR
ERDEARDALSRISVSAGGVPSGDAMQVDSAGLPDEITAKIDQTHKQLSTTRRKRPVPDGW
ATADNIQSFDTTFETEPLYPGGKTLALDKSGDLALTGGKDGVAGIFSILQKQAVQALKVG
GSVTAGAWYNDRPVVATSTGAVKVFENGTEIAQVGSHAGAATSLSIHPSGDILASTGVDK
SYVLYDLSSNKQLTQVFTDAELLCSGFHPDGHLFAAGGRDGQIKVFDVKSGESMANFDAG
GALQAIAFSENGTWLAAAVQGETSVQIWDLRKAASIKTLEVGSTVESVQWDYTGQFLAAA
GSGSVAVQHYAKSAKSWSEPFRKAIPAAAVQWGASAQSLVTLTADGGLTVFGSA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgcgcaatttccggcgaagcgccgcaggttccagtcgcgtcgaagaagagcgga
aatgttttcgagaagcgtctgattgaggcatacgttgccgagcatggcaccgaccccgtc
aacggcgaagagctcaccaccgacgaccttgtcgagctcaagacacagcgcaccgttcgc
ccacgtcctccgaccctcacctccatcccctccctcctcgccactttccagaacgaatgg
gatgccgtcgccctcgagacctaccagctgaagcagcagcttgcgcaaacccgtcaggaa
ctcagcactgccctctaccaacacgatgcggccgttcgggttatcgcacggttaacgcgt
gagagggacgaggctcgcgacgctctgtccaggatcagcgtgagcgctggtggcgtgcct
agcggggatgccatgcaggtggacagcgccggtctgcccgacgagatcacggccaaaatc
gatcagacacacaaacagctgtctactacgaggaggaagcgccctgtgccagatggctgg
gcgacggctgacaacatccaatccttcgataccacgttcgaaacggaacctctatacccc
ggcggcaagacgctagctctcgacaagagtggcgaccttgcgcttactggtggcaaggat
ggtgttgctggtattttctcgatattacagaagcaggcggtccaagctttgaaggttggc
ggcagcgtcactgctggtgcctggtacaacgacaggccggtcgttgctacgtcgactggg
gcggtcaaggtatttgagaacggcaccgagattgctcaggttggctcgcatgccggagct
gcaacgtctctctccatccacccgagcggcgacattctcgcttcgacgggcgtggacaag
agctacgtgctctacgatcttagcagcaacaagcagcttacgcaggtattcaccgatgct
gaactcctctgcagcggattccaccccgacggccacctctttgcggccggtggtagggac
ggtcagatcaaggtcttcgacgtcaagtcgggcgagagcatggccaacttcgacgccggc
ggagctctccaagcaatcgcgttttcggagaatggcacttggctggcagctgcggtgcag
ggggaaacgagcgtccagatctgggatttgcgcaaggcggcaagcatcaagacgctcgag
gttggtagcacggtggagagcgtgcagtgggattacacgggccagttcctggcggcggcg
ggatcgggcagcgtcgctgtgcagcactacgcaaagtcggccaagagttggtcggaaccg
ttcaggaaagccatcccggcggcggcggtgcagtggggagcttcggcgcagtctctggtg
accctgacggcggacggagggctcacggtttttggctcggcttaa
DBGET
integrated database retrieval system
