Neofusicoccum parvum: UCRNP2_4759
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Entry
UCRNP2_4759 CDS
T03126
Name
(GenBank) putative histone deacetylase rpd3 protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
npa
Neofusicoccum parvum
Pathway
npa03082
ATP-dependent chromatin remodeling
npa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
UCRNP2_4759
03083 Polycomb repressive complex
UCRNP2_4759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npa03036
]
UCRNP2_4759
Enzymes [BR:
npa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
UCRNP2_4759
Chromosome and associated proteins [BR:
npa03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
UCRNP2_4759
HDAC complexes
Sin3A-HDAC complex
UCRNP2_4759
BRAF-HDAC complex
UCRNP2_4759
REST complex
UCRNP2_4759
SHIP complex
UCRNP2_4759
MiDAC complex
UCRNP2_4759
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
UCRNP2_4759
Heterochromatin formation proteins
Other heterochromatin formation proteins
UCRNP2_4759
Chromatin remodeling factors
NuRD complex
UCRNP2_4759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-ProteinID:
EOD48467
UniProt:
R1ELS1
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MVGAGAAPLDEFNVNGSSQPKKVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLIMNYGLY
KKLEIYRAKPASKFEMTQFHTDEYVDFLQKVTPDNMDNFAKEQSKFNVGDDCPVFDGLFE
YCGISAGGSMEGAARLNRGKCDVAVNWAGGLHHAKKSEASGFCYVNDIVLGIIELLRFKQ
RVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGVGNGKNYAVNFPL
RDGITDETYKGIFEPVIKAVMDWYRPEAVVLQCGGDSLSGDRLGAFNLSMRGHANCVKFV
KSFSLPTLVLGGGGYTMRNVARTWAFETGQLVGSELGPQLPYNDYFDYFAPDFELDVRPS
NMDNANSPEYLDKIRLQVIENIKRTAFAPSVQMTDVPRSPLMPGMDDEAEDEMNDIDEDE
NPDTSESEDEGENSRQGVRAQPNKKRRMNIMDYQNANAVDGDDTPRPGSANAPAPAAAPA
GEATPAAAEPETADPEPKVEPESEQPATAPVGGSPAPQPGTTATADTTAEDVEMDDAEPG
VQKEEGLKERQEEETRGEAATEAAAKAESSS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgccggtgctgcgccgctcgacgagttcaacgtcaacggcagctcgcagccg
aagaaggtcgcgtacttctacgactcggacgtgggcaactatgcatatgtcgccggccat
cccatgaagccgcaccgcatacgcatggcccacagtctgatcatgaactatggcctctac
aagaagctcgaaatctaccgcgcgaagcccgcctccaagttcgagatgacgcagttccac
accgacgagtacgtcgacttcctgcaaaaggttactccggacaacatggacaacttcgcc
aaggagcagagcaagttcaacgtcggtgacgactgccctgtcttcgacggcctgttcgag
tactgcggcatcagcgccggcggtagcatggagggcgccgcacgtctcaatcgaggaaag
tgcgacgtcgctgtgaattgggctggtggccttcaccacgccaagaagagcgaggccagt
gggttttgctacgtcaacgacattgtgcttggcattatcgaactcctgcgcttcaagcag
cgcgttctctacattgacatcgacgttcaccacggcgatggcgttgaagaagccttttac
acgaccgaccgtgtgatgaccgtgtccttccacaagtatggcgaatatttcccaggaacg
ggagagttgcgtgatattggtgttggcaacgggaagaactatgctgtcaacttcccgcta
agggacggcatcaccgacgaaacgtacaagggcatctttgagcctgttatcaaagccgtt
atggattggtacaggcctgaagccgttgtgctgcagtgtggaggtgacagcttgtccggc
gacaggttaggtgccttcaacctcagcatgaggggacatgcgaactgtgtcaaatttgtg
aagagcttcagtctgcctacactggtgcttggtggaggtggttacaccatgcgcaatgtc
gcacgcacctgggctttcgagactggccaactggttggttctgagttaggaccgcagctc
ccgtacaacgactactttgactattttgctccagacttcgagctcgatgtgcgcccctca
aatatggacaatgcgaactcgcctgaatacctcgacaagatccgtcttcaagtgatcgag
aacatcaagcgcactgcatttgctccctccgtgcagatgacagacgtccctcggtcaccg
ttgatgcccggcatggatgatgaagcagaagacgagatgaacgacatagacgaggatgaa
aacccggataccagtgagagcgaggatgagggcgagaactcccggcaaggtgtgcgcgcg
cagccgaacaagaagcgcaggatgaacatcatggactaccagaacgcgaacgctgtcgac
ggcgacgatactcctaggcctggcagcgcaaatgcaccagcaccagccgccgcgcctgct
ggagaggccacccctgcggctgccgagcctgagactgctgatcccgagccaaaggtcgag
cctgaaagcgagcagccagctacagctcctgtgggaggtagcccggccccgcagcctggc
acgacggcgactgcggataccacggcagaagacgtcgaaatggacgatgccgagcccggt
gtgcaaaaggaagagggcctcaaggagaggcaagaagaagagaccaggggtgaagcggcg
actgaagccgcagcgaaggcggagagctcatcatga
DBGET
integrated database retrieval system
