Neofusicoccum parvum: UCRNP2_491
Help
Entry
UCRNP2_491 CDS
T03126
Name
(GenBank) putative ku family dna protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
npa
Neofusicoccum parvum
Pathway
npa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
UCRNP2_491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npa03400
]
UCRNP2_491
DNA repair and recombination proteins [BR:
npa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
UCRNP2_491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
Motif
Other DBs
NCBI-ProteinID:
EOD52730
UniProt:
R1GM08
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MADKEATVYIVDVGKSMGEKNGGRGETDLEWCMKYVWDKITTAMATGRKTLFQSVVALRS
DKTENPLSEEDGYENISVLQSLSPMYMPQLRELREKIRPSNTDEGDAISALVVAIQLIAD
HCKKLKYKRKIILVTNARGSIDSDGLGEIAKKVQGENIELVILGPDFDDPDYGLKEEDKD
PVKATNEQTLQQLANGCDGVFGTIAQAIAELETPRVKLTKPVASYRGLLTLGDPSKYDTA
MTIDVERYPRTMQQRPPTASSYAVRSDLAPGESQAQSSMTVANGDGELDQNDLAAVKQNT
SYHIIDPTAPGGKRDVDREDTAKGYAYGSTAVPISESDRDVTDFESFASLDIIGFVPGNK
LDRYMEMSKANIIIPQKANQKASMALSSFIHALYELESYAVARFVPKENKEPAILLLVPE
IKADYECLIDTELPFAEDMRGYRFPPLDRVVTVSGKEIHTHKNLPSQDLMKSMSDYIDNM
DLSTAGQDEDGYMKPPEHLLKQAQPFLDAMVSAGDVKRVPPRQKGRKRTREFEKPLSGLN
VEELLGREKRVKISAENAVPEFKQALNMTDNVEDIKGIAKQLSGIIQDYIRHSMGDNGYQ
RAVEAIRVMKEEMLELEEPGVFNDFLKDLKKKIFAEELGGDRKEMWYRIRVNKLGLIDKR
ATSLSDVTEEESKKFLSSSK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggaggcgaccgtctacatcgttgatgtgggcaaatctatgggagagaag
aacggcggccgcggcgagaccgacctggagtggtgcatgaagtatgtctgggacaaaatc
acgaccgcgatggctacgggccgcaaaacgctcttccagagtgtagttgccctgcgctca
gacaagacggagaaccccttgtcggaggaagatggttatgagaatatctcggttctccag
tcactaagccctatgtacatgccacaacttcgggagctgcgtgagaagattcgccctagc
aataccgacgaaggtgacgcaatctccgccctcgtcgtcgctatccagttgattgcagat
cattgcaagaaactgaagtacaaacggaagatcatactcgtcaccaatgcccgaggatcc
attgactctgatggcctgggggagatcgcaaagaaagtacagggcgagaacattgagctg
gtcattcttggccccgacttcgacgaccctgactatggcctgaaggaagaggacaaagat
ccggtcaaggcaaccaatgagcaaactcttcagcaacttgccaatggttgtgatggtgtc
tttggaactatagctcaagccatcgcagagctcgagaccccgcgagttaagcttacgaag
ccggttgcgtcgtacagagggcttctgaccctcggtgatccatcgaagtacgataccgcc
atgacaattgacgttgaacgctacccaaggaccatgcaacagaggcctcccaccgccagc
tcatatgccgtcaggtctgatcttgcaccaggcgagtcacaggcgcagtcttcgatgacc
gtggccaatggtgatggagaacttgaccagaatgacttggcagccgtcaagcaaaacaca
tcttaccacatcatcgaccccaccgcaccaggcggaaagcgagatgtcgatagggaggac
accgccaaaggctatgcatacggtagcactgccgtacccatcagcgaatcagaccgcgac
gtgacagacttcgagtcttttgcctcgttagacatcattggctttgtccctggaaacaag
cttgatcggtacatggaaatgtcaaaagcaaatatcatcatcccgcaaaaggcgaaccag
aaggccagcatggcattatcatccttcatacatgctctatacgagttagagtcgtatgcg
gtggcgcgcttcgttccaaaggaaaacaaagagccggcgattctacttctcgtacctgag
atcaaggcagattacgagtgcctgattgatacagaactgccctttgccgaggatatgcgc
ggctaccgcttcccacccctggaccgcgtggttaccgtctcaggcaaagaaatacacact
cacaagaatctgcccagtcaggatctcatgaagtccatgagtgactacatagacaacatg
gatctatctacagctggccaagatgaggatgggtacatgaagcctcctgagcatctgctc
aagcaggctcaaccgttcctggacgctatggtcagtgcaggtgacgtaaagcgagtgcca
ccgagacagaagggccgcaaacgcactcgcgagttcgagaaaccactttctggtctcaac
gtggaggagcttctgggccgggagaagcgtgtgaagatctctgccgaaaacgccgtccct
gaattcaagcaagctctcaacatgaccgacaatgtcgaggatatcaagggcatcgcgaag
cagctttccggcatcattcaagactacatacgccacagtatgggcgacaatgggtaccaa
agagctgtcgaagcaatccgagtcatgaaagaggagatgttggagctggaagagccgggc
gtgttcaatgatttcttgaaagacttgaagaagaaaatctttgccgaggagcttggcgga
gataggaaagagatgtggtacagaatcagggtgaacaagttgggcttgatcgacaaaaga
gccacgagtttgtcagatgtcacggaggaggagtccaagaagttcctgtcttcatcgaag
tag
DBGET
integrated database retrieval system
