KEGG   Neofusicoccum parvum: UCRNP2_5233
Entry
UCRNP2_5233       CDS       T03126                                 
Name
(GenBank) putative wd domain-containing protein
  KO
K14793  ribosomal RNA-processing protein 9
Organism
npa  Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:npa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:npa03009]
    UCRNP2_5233
Ribosome biogenesis [BR:npa03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    UCRNP2_5233
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_DCAF12 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_LRRK2 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 PEP5_VPS11_N ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_SCAP
Other DBs
NCBI-ProteinID: EOD48016
UniProt: R1GIA9
LinkDB
Position
Unknown
AA seq 558 aa
MSSFFTTPASQRKRKRSQTSAQEPEKRNRKRREDSISSGDSDDDGARPRDEDDNASENSS
DAEHDETAAERRLRLAERYLDNIREEVDEAGFDAAEIDKDLIAERLKEDVAESKGRVYRH
IAESLDFSSAAHTFSRADNHVTTAIATHPPYAYTTTKDMCLIKWSLPDPLALTAEHPSNM
TPRRRPTQVAFTRGNKNHAKDPNYTHHTAPILCVAASPDGQFVATGGADKKLIVWRAEDL
TPLKVFTQHRDAVTSLAFRRGKNQLFSASADRTIKTWSLDELAYVETLFGHQDGVIDVAA
LAQERCVSVGARDRTARLWKVAEESQLVFRGGGSSVTRTNRSDGNTAKAGGGFAEGSIDR
VALVDEETFVTGSDNGAISLWSVHKKKPVFTVGMAHGLDPPMRRDEVYADAEIDDDAWVP
PQQPRWITALTTIPYTDVILSGSWDGWVRAWKINKEGRRIESLGTVGQIRQTGDGDAVMV
DGADDDQQPAVGNVRGVVNDLSVFERGDRGKDGVCVVAAVAKELKMGRWRKYPGKNAAVV
FEIKRNIAADGTEEELEE
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgtcgtccttcttcacgactccggcctcgcagcgcaaaagaaagcgctcccaaacctcc
gcccaggaaccagaaaaacgcaatcgcaagcgccgcgaggactccatctccagcggcgat
tccgacgacgacggtgcacgcccgcgcgacgaggacgacaatgccagcgaaaactcttca
gacgccgagcacgacgaaactgcggcagagcggcgtctgcgccttgctgagcgctacctg
gacaatatccgcgaagaggttgacgaagctggattcgatgccgcagaaatcgacaaggac
ctcattgcggagcggctgaaggaagacgtcgccgagagcaaaggccgcgtctaccggcac
atagcagaaagccttgatttctcctccgcagctcacaccttctcccgcgctgacaaccat
gtcaccaccgcaatcgcaacacaccctccctacgcatacacaaccaccaaggacatgtgc
ttgattaagtggtctttacccgatccgctagccctgaccgccgaacatccttcaaatatg
acgccgcgccgccgccctacccaagtagccttcactaggggcaacaagaaccacgccaaa
gaccccaattacacacaccacaccgcgcctatactatgtgtagcagcatcccccgacggc
caattcgtagccaccggcggagcggacaagaagctcattgtgtggcgagccgaggacctc
acgccgctcaaggtattcacacaacaccgagacgccgtcacatcgttggccttccggcgc
ggcaagaaccagttgttcagcgccagcgcggaccggacgatcaagacgtggagcctggac
gagctggcgtacgtggagacgctgttcgggcaccaggacggggtgatagatgtggcggcg
ctggcgcaggagcggtgcgtctcggtgggggcgcgcgaccgcacggcgcggctgtggaag
gtggccgaggagagccagctggtgttccgcggcggcggctcgtcggtgacgcgcaccaac
cgatcggacggcaacacggcgaaggcgggtggcggcttcgccgagggcagcatcgaccgc
gtcgcgctcgtcgacgaggagacgtttgtcaccggcagcgacaacggcgccatctccctc
tggtccgtccacaagaagaagcccgtcttcacggtgggcatggctcacggcttggacccg
cccatgcggcgggacgaggtctatgcggacgctgagatcgacgacgacgcgtgggtcccg
ccgcagcagcccaggtggatcacagcattgacgacgattccatacacggatgtcattctc
agcggcagttgggacgggtgggtgagggcatggaagattaacaaggaggggaggaggatc
gagtcgttagggacggttgggcagatccggcagaccggcgacggtgacgcggtcatggtt
gatggcgccgacgacgatcagcaacccgcagtggggaacgtcaggggtgtggtgaacgac
ctctccgtcttcgagaggggggacaggggcaaggacggcgtctgcgtcgtcgcggccgtc
gcgaaggagctgaagatgggcagatggagaaaataccccggcaagaatgccgccgtcgtt
ttcgagattaagaggaatatcgctgctgatgggaccgaagaggagttagaggagtaa

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