Neofusicoccum parvum: UCRNP2_5246
Help
Entry
UCRNP2_5246 CDS
T03126
Name
(GenBank) putative wd domain protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
npa
Neofusicoccum parvum
Pathway
npa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
UCRNP2_5246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npa03009
]
UCRNP2_5246
Ribosome biogenesis [BR:
npa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
UCRNP2_5246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR75_2nd
EIF3I
WDR55
Motif
Other DBs
NCBI-ProteinID:
EOD48008
UniProt:
R1EJT3
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MAGPTAVQDAPSTPKDARRKRKAKDSSAGNHDAKRIRTQDEENAAGAPPSGGNQAKAETA
LAIVGDKAGQLTKAGKNDASKPRKKQHADKSSWYTSEPAGGRFLQIDPIFSRDERFLIFA
TAKAVHIYSTANSLLVRTLPMNTSHSITAYALSSIDPDHLYVSDASGFVVLWDWMSGKKV
NRWNLAAPVRGIATSAVDGPTGEKVETVFTLDKGEHSIIHAHRLRGRKDASESSAQPLLK
TRVPLQSFTVAGQGQVIAAAAKDRVFVGQIKNTSTATLKDLIFIWRELSCTQKITSIDVQ
VKGAEKKTPKKGAPSSTGQVNLVIGCTNGALFLYEDIVAKLSQAEKQQKKDSKEPSAAPS
LAPRTLHWHRNPVGTVKWSLDGNYIISGAITRNNATIFNQGPGATKLREPDLRHLQLSHD
GKWLATVEEWIPPVEDVEHLAAEKTMIEEERRVRREVYLKFWLWNEEKAQWMLESRIDAP
HQFTDKLISGRVFDLNQGLVHFVDPTAGSVRYSRGGLYSTGLVEIAFVGRQFIILSNSLS
VWDLVDDELSYGYSFRPLGLTRAQKAEIIHLAINNTDGTFALSLPLPEQQKKASKLESAD
APAPTAATQKEPSSTTKKRMSKIFVFSTASPRPLYSVVVPQLVTALLPAGSRKGFVALNT
AAELRVIAPKTAGFQLVGPVAAAEESLGAFVDEETALEPLVEDEEDDKVEEKLPTEEELE
EGVAAEGDQGDKPVVRLEMLAGVFDVGPSFALPPVRDLFEAVVGLYARKPRAVAAV
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggccggccccaccgctgtccaggacgcgccgagcacgcccaaggacgcccggcgcaag
aggaaggccaaggactcctccgctggcaaccacgacgccaagcgcatccgcactcaggac
gaggaaaacgctgctggagctccgccttctggaggaaaccaggccaaggccgagaccgca
ctcgccattgtgggagacaaggccggacagcttacgaaggctgggaaaaatgatgcctcg
aagcccaggaaaaagcagcatgccgacaagagtagctggtacacttccgagccggcgggt
ggccgcttcttgcagattgaccccatctttagcagggatgagagattcctcattttcgcg
acagcgaaggccgtgcatatctactccaccgcaaactctctgctcgtccgcacgctgcct
atgaacaccagccacagcatcaccgcctacgcactgtcaagtattgatcccgaccaccta
tatgtctctgatgcttccggatttgtcgtgttgtgggattggatgagtgggaagaaggtc
aatcgctggaacctggctgcccccgtccgcggcatagctaccagcgccgtcgatggtccc
accggagagaaggtggagaccgtcttcaccctggacaagggcgaacacagcatcatccat
gcccacaggctgcgtggccgcaaggacgcgtctgagtcttcagcccagcctctcctcaag
acgagggtgcctcttcagtctttcaccgtcgctggccagggtcaggttattgccgccgcc
gctaaagaccgtgtctttgttggccaaatcaaaaacacctctaccgcaacactaaaggac
ctcatattcatttggagggagctgagttgcacccaaaagatcacttcgatcgacgtccaa
gtaaaaggtgcagagaagaagacgcccaagaagggtgccccatcctcgactggccaggtt
aacttggtcatcggctgcaccaatggagctttgttcctctacgaagacattgtggccaag
ttgagccaggccgaaaaacagcaaaagaaggactccaaggagccgtctgctgcgccatct
ttggcaccccgcacccttcactggcacagaaatcccgtcgggacggtcaagtggtctttg
gacggaaactacataatttccggagcgattactcgcaacaacgctaccatcttcaaccaa
ggacccggagctaccaagctgcgtgagcctgatctcaggcatcttcagctgagccacgac
ggaaaatggcttgctactgtcgaggagtggatccccccagtggaggatgtggagcatctg
gctgcagagaagacgatgattgaggaggagcggcgcgtaagacgtgaggtctacctcaag
ttctggctctggaacgaggagaaggcccaatggatgttggaatcgcgcatcgatgcccct
caccagttcaccgacaagctgatatctggccgtgtcttcgatttgaaccaaggcctcgtc
cacttcgttgaccctactgctggaagcgtccgatactctcggggtggtctgtacagtacg
ggcttggttgaaatcgccttcgtcggccgccagttcatcatcctgtcgaactcattgagt
gtgtgggacttggtcgacgacgagctgagctacggctacagcttccgcccactcggcctc
acgcgcgcccagaaggccgagataatccatctcgctatcaataacaccgacggtaccttc
gccctctccctgccgctgccagagcagcagaaaaaggcctccaagcttgaatcagccgac
gcaccagcgcctaccgccgccacgcagaaagaaccctcctcgactactaagaaacgcatg
tccaagatcttcgtcttctcgaccgcctccccccgccccctttattctgtcgtcgtcccc
caactcgtcaccgccctcctcccggccggctcccgcaagggtttcgtcgccctcaacacc
gccgccgagctgcgcgtcatcgcgcccaagacagccggcttccagctggtcggccccgtc
gctgcagccgaagagtcgctgggggcgttcgtggacgaggagacggcgttggagccgttg
gttgaggatgaggaagacgacaaggtggaggagaagctgccgaccgaggaggagttggag
gaaggcgttgcggctgaaggcgaccagggcgataagccggtcgtgaggctagagatgctg
gcgggtgtgttcgatgtcgggcccagctttgcgctaccgccggttagggatctgttcgag
gcggtggtggggctgtatgcgaggaagccgagggcggtggctgcggtttga
DBGET
integrated database retrieval system
