Neofusicoccum parvum: UCRNP2_5291
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Entry
UCRNP2_5291 CDS
T03126
Name
(GenBank) putative exonuclease protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
npa
Neofusicoccum parvum
Pathway
npa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
UCRNP2_5291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npa03009
]
UCRNP2_5291
Ribosome biogenesis [BR:
npa03009
]
Eukaryotic type
Pre-60S particles
RNases
UCRNP2_5291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
HTH_43
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
EOD47963
UniProt:
R1EJL7
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MSGQKRSHAEFAEGDPALAESHPRKEQSRDASTDGASGANDGWETYESKGTKKLKKIPGE
KSKNYPSIIHSPNARLQSTVKISDMQNLILYIMADAPAPRWVAVNNSGQIRKAVIVMVPG
LEPGMFNGDIPLVEAAQDAVPQDSKNKDSASVSPDDYYPKQLVSEKLPDPLKPFADMFPH
IWPIKSPGDDKFSRLHSPLQAILTSPIPKPKEDKNKKGPQPAHNRDWKNKRTPITEYIAT
LEDLLADGDDWTIHPAMYTSEGERTDSSNERKRKMRDSDHGWVDTAVASLTDGDVPNDQI
QKGSVTAGRKILTIDCEMCKTGENDFELTRVSIVGWDGEVVMDELVKPTNPITDYLTPYS
GITEEKLKDVTTTLADIQKRLLEIITPQTILVGHSLNSDLNALKMTHPFIVDTSLIYPHP
RGPPLKQSLRFLTQKYLGKEIQKGHGGSGHDSVEDARSTLELVKQKCEKGKIWGTSESNS
ESIFKRLGRHRKPKNQASSAGEEYRTGAVVDWGDPTRGFGAQADVCFGCQSDDDVVKNII
AAVTGEADTVKPGLPGRGVDFVWARMRELEAVRGWWTRTKTADNAKLLANALGGGEANPF
PPAKTDGEAAVKDETAAETEETTTKVEETVTISETPANADPAAGTSTHQQRANTSELAEA
VQKTARRLQDIYDALPPCTAFMVYSGSGDPREITRLQQMKQQFQREYKIKKWDEISVKWT
DTEDQELRAACKKAREGLGFVVVK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccagaaacggagtcacgcagaattcgccgagggagatcccgctctggccgaa
tcgcacccccgcaaagagcagtcgcgcgacgcgtccaccgatggcgccagcggcgcaaac
gacggctgggagacatacgagagcaagggcaccaagaagctgaagaagatccctggcgag
aaatccaagaactacccgtccatcatccattcgccgaacgcgcgcctgcagtcgaccgtc
aagatcagcgacatgcaaaacctcattctctacatcatggctgacgcgcctgcgcctcgt
tgggttgccgtcaacaactctggtcaaattagaaaggcggtcattgtcatggtgcccggc
ctcgaacctggcatgttcaatggagacattccgctagtcgaagctgcgcaagacgctgta
ccacaggacagcaagaacaaggacagcgcatctgtctctcccgatgactactaccccaag
cagctcgtgtcagagaagttacctgatccgttgaagccctttgcagatatgttcccgcac
atctggcccatcaagagccctggcgacgacaagttttcgagacttcactcgccactgcaa
gcaatcttgacttcgcccattccgaagccaaaagaagataagaacaagaagggcccgcag
cctgcgcataaccgggattggaagaacaagcgcacgcccattactgagtacatcgccacg
cttgaggatctgctggcagacggcgatgactggaccatccatcctgccatgtacacttcg
gaaggtgagagaacagacagcagcaatgagaggaagcggaagatgagggactccgaccat
ggttgggtcgacacagctgttgcgtcgctgacggatggtgatgtacctaacgaccaaatc
cagaaaggcagtgtaacggccggcaggaagatccttacaatagactgtgagatgtgcaag
acaggagagaacgacttcgagctcactcgagtaagcattgttggctgggatggagaagtc
gtgatggacgagctagtgaagcccacaaacccaatcaccgattacctcactccctactct
ggtatcactgaggagaagctcaaagacgtcacaacgactcttgccgacatccagaagcgc
ctcctggaaataatcactccgcagacgattcttgttggtcattcacttaactcggatctc
aacgcattgaagatgacgcacccgttcatagtcgacacctcgctcatctatcctcatccg
cgcggtccaccgctgaagcaatccctcaggtttttgacacaaaaatacctcggcaaggaa
atccagaagggccacggtggctccggtcacgactccgtggaagacgcccgcagcaccctc
gagcttgtgaagcagaaatgcgaaaagggaaaaatttggggcaccagcgaatccaacagc
gaatccattttcaagcgcctcggccgccaccggaagcccaagaaccaagcaagcagcgct
ggcgaagagtataggacgggtgccgtagtcgactggggcgaccctacacgcggcttcgga
gcccaagcagatgtgtgtttcggctgtcagagcgacgatgatgtcgtgaaaaatatcatc
gcggcggtcacaggagaggcggacacggtcaaaccaggcctgcctggcagaggtgttgac
tttgtctgggctcgcatgcgcgagcttgaggctgtgcgtggttggtggacacggacaaag
acggcggacaacgcgaagttgctggcaaatgccctcggcggtggagaggccaatcctttc
cctccggcaaagactgacggcgaggctgcggtaaaggatgagaccgctgcggagaccgag
gagactactacgaaggtcgaggagaccgtcaccatttctgaaacccccgcgaacgcggac
cctgccgccggcacttcaacccaccagcaacgagccaatacctcggagctcgctgaagct
gtccagaagaccgcccggcgccttcaggatatatacgatgcgctgccgccgtgcactgcg
ttcatggtctatagcggcagcggcgatccgcgcgagatcacccgcctgcagcagatgaag
cagcagttccaacgggagtacaagatcaagaagtgggacgagatcagcgtcaagtggacg
gacacggaggaccaggagctgcgcgcggcgtgcaagaaagcgagagagggcctgggtttt
gtggttgtgaagtga
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