KEGG   Neofusicoccum parvum: UCRNP2_5313
Entry
UCRNP2_5313       CDS       T03126                                 
Name
(GenBank) putative poly + rna export protein
  KO
K14298  mRNA export factor
Organism
npa  Neofusicoccum parvum
Pathway
npa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:npa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    UCRNP2_5313
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npa03019]
    UCRNP2_5313
   03036 Chromosome and associated proteins [BR:npa03036]
    UCRNP2_5313
Messenger RNA biogenesis [BR:npa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     UCRNP2_5313
Chromosome and associated proteins [BR:npa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    UCRNP2_5313
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_1st WDR55 WD40_Prp19 WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_Vps41 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_ACSF4
Other DBs
NCBI-ProteinID: EOD47930
UniProt: R1G8T5
LinkDB
Position
Unknown
AA seq 387 aa
MALFGAGAASSASNPTQGDTSKDVQINSPPTDSISEIAFSPVSDILAASSWDGSVYVWSI
DGNGQSAPATSFKFEAPALCCAWALDGSCIVGAGADKTAKRIDLGGSPTPVTVAQHDQPI
RSIKMTNINQTPVLVTGSWDKTVKYWDVRASNLQPAIVINAQERIYTMDAKDKLLVVGTA
DRYIDIINLDNPNTFYKTMQSPLKWQTRVVSCFTDATGFAVGSIEGRCAIQYVEEKDASC
SSNPQQRNNKNLIVSKWMKKASDPIDSSNFSFKCHRQTDSTQRDVAKVFSVNAISFHPQH
GTFSTAGSDGTFHFWDKDAKHRLKGYPEVGGPITSTAFNASGSIFAYAVSYDWSKGYAHN
NQNISTKIMLHPVQADECKPRPGSKKR
NT seq 1164 nt   +upstreamnt  +downstreamnt
atggctctcttcggtgccggcgccgcaagctcggcctcgaatcccacccagggcgacacc
tccaaggatgtgcagatcaactctccgcccaccgactcaatcagcgaaatcgccttttcg
ccggtcagcgacatcctggccgcctcgtcttgggatggctccgtctacgtctggtcaatc
gacggcaacggccagagtgcacccgccacttcgttcaagttcgaagcgccggcgctctgc
tgcgcctgggccttggatgggtcctgcattgtcggtgccggtgctgacaagacggcaaag
aggattgatctcggcggtagccctacgcccgtcacggtcgcccagcacgaccaacccatt
cgcagcatcaagatgaccaacatcaatcaaacccccgtgctcgtgaccggctcctgggac
aagacggtcaagtattgggacgttcgcgccagcaatctccagcccgccatcgtcatcaac
gcccaggagcgtatctacaccatggatgccaaggacaagcttctggtggtgggcaccgcc
gaccgctacatcgatattatcaacctggataaccccaacactttctacaagaccatgcag
agcccgttgaagtggcagaccagggtcgtcagctgctttacggacgcgacgggctttgct
gtgggcagtatcgagggcaggtgcgccatccaatacgtggaggagaaggacgcttcgtgt
tcctcaaacccccagcagcggaacaacaagaatcttatcgtgtccaagtggatgaagaaa
gcctctgaccccatcgacagctcgaacttctccttcaagtgtcaccgccagaccgacagc
acacagcgcgatgttgctaaagtcttctcggtcaacgccatctctttccacccgcagcac
ggcaccttcagcaccgctggtagcgacggcaccttccacttctgggacaaggatgcaaag
caccgcctcaagggatatccggaggtcggcgggcccatcacgtcgacggcattcaacgcg
tccggcagcatcttcgcctatgccgtatcttacgactggagcaagggctacgcccataac
aatcagaacatctcgaccaagatcatgctgcatccggtccaagccgacgaatgcaagcca
cgccccggcagcaagaagagataa

DBGET integrated database retrieval system