Neofusicoccum parvum: UCRNP2_5509
Help
Entry
UCRNP2_5509 CDS
T03126
Name
(GenBank) putative snf2-family atp dependent chromatin remodeling factor snf21 protein
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
npa
Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npa03021
]
UCRNP2_5509
03036 Chromosome and associated proteins [BR:
npa03036
]
UCRNP2_5509
Transcription machinery [BR:
npa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
UCRNP2_5509
RSC complex
UCRNP2_5509
Chromosome and associated proteins [BR:
npa03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
UCRNP2_5509
SWI/SNF complex
UCRNP2_5509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
SnAC
QLQ
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
EOD47729
UniProt:
R1GP10
LinkDB
All DBs
Position
Unknown
AA seq
1405 aa
AA seq
DB search
MASVQPINGTSGPGQGGMMSLPPGLTKEQVHATLQKYQQMKAQNVSESDPEFIKARNLLQ
AVQQQTNLQKQRQRYLMEQQQKQQQLQQQQQQQQQNGTAHAAATNGTPASSTPSAPSAPS
ANGQAAATAGAPTLPSNNDTGANNVAQQSTGAEKATTPSAHPAFTQPQIMTLRAQIAAFK
RISRNIPITPEMQQALFPSKQATKSPTPTERVAAAGQVLDNAQAAAADATKEESNAHKGF
KTTTDPYSMFPKTITYSEHGIRERRHILPSIMPSGVDVDKVREEREIVLYNRIQARKAEL
ESLPANIGIWDTSKSDTPTDEHAKNLKLKALIEYKKLCLLPKQRALRQEIGRQMLYADNL
AMTANRAMYRRVKKQSLREARITEKLEKQQRDARESKEKKKQTDQLKAVLARGEEIQKAA
QNQRMRMQRLGRTMLQTHQNIEKEEQKRVERTAKQRLQALKANDEETYLKLLGQAKDTRI
SHLLKQTDGFLGQLSASVKAQQRSAADRFGGAAPDSDSEEDDSDLDEDDPNRKANKVDYY
EVAHRIKEEVYQQSSNLVGGTLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISL
ITYLIEKKQQPGPYLVIVPLSTLTNWNSEFEKWAPSVQRIVYKGPPQQRKQQQQQIRWGQ
FQVLLTTYEFIIKDRPILSKIKWLHMIVDEGHRMKNANSKLSSTITQYYTTRYRLILTGT
PLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDKMELSEEEQLLVIRRLHK
VLRPFLLRRLKKDVEKDLPDKQERVIKCTFSALQAKLYKQLVNHNRLMVSDGKGGKTGMR
GLSNMLMQLRKLCNHPFVFEEVEDQINPGRGTNDLLWRTAGKFELLDRILPKFQVTGHRV
LMFFQMTQIMNIMEDFLRLRGLQYLRLDGSTKADDRSELLKLFNAPNSPYFCFLLSTRAG
GLGLNLQSADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAN
FKLDMDGKVIQAGKFDNKSTNEERDAMLRIMLESAEAAENLEQAEMDDEDLNLIMMRSDD
ELIRFREIDEKRAKEGGYGANKKMPRLFSEAELPDIYVNDDTAIVEEVEETYGRGARERR
SVKYDDGLTEEQWLEAVDNDEDSIEAAIARKEASKARRAGNKEKRVLDVVGESPPVSRES
SEEPAPKKRGRKPKAEKRKVDEASLDGDTTPAPRKRGRGAKANETLSPEDRSALQKILNN
VYETLNDLEEGPAPGEDLAPRGIIDPFIQLPDRYEYPDYYQIITKPICMDQIKKKINKRE
YQHPRQFRQDMLLLCNNCRTYNEDTSILYQDANLIEETCISKLKEETEEYPQFADFDDQG
SASVRPSTGPVSSAGTPLASGPGRT
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtacagccgatcaacggcacttctggcccgggccaaggcggcatgatgtct
ctgccgcctggtctcactaaagaacaagttcacgcaacgttgcagaagtaccagcagatg
aaggcgcagaatgtttctgagtccgaccccgaattcatcaaggcgcgtaatctgcttcag
gctgtccaacaacaaacgaaccttcagaagcagcgccagcggtacttgatggaacaacag
cagaagcagcaacaattacagcagcaacagcagcagcaacaacagaatggtactgctcac
gctgctgccacaaacggcacaccagcgtcctctacgccctctgcgccctctgcgccctct
gccaatggtcaagccgctgcgactgctggtgcccccacgctgccttcgaacaacgacact
ggcgcaaacaacgttgcgcagcaatctaccggcgctgagaaagctactacgcctagtgcg
catcctgccttcactcagccacagatcatgaccctgcgcgctcaaattgctgcattcaag
cgtatctctcgtaatattcccatcactcccgagatgcagcaggccctcttcccttcgaag
caagcgaccaagtcccccactcccactgagcgtgtcgccgctgctggccaagtattggat
aatgctcaggctgccgcagctgatgccaccaaggaggaatccaacgctcacaagggcttc
aagacaacaaccgacccgtattcgatgttccccaagacaatcacgtactctgagcacggt
atccgcgaacgcaggcacatcctaccgagcatcatgccctctggggttgatgtcgacaag
gtccgcgaggaacgggagattgttctctacaatcggatacaggctaggaaggcggagctc
gaatcgctacctgcaaatattggcatctgggacacaagcaaatcggatactcctaccgac
gaacacgcaaagaacctgaagctgaaggctctgatcgagtataagaagctttgccttttg
ccaaagcagcgtgcactaaggcaggagatcggaaggcagatgctgtatgctgataacttg
gccatgactgccaatcgggccatgtatcgccgcgtcaagaagcaatctctccgcgaagct
cgcattaccgaaaagctggagaagcagcaacgcgacgctcgggagagcaaagaaaagaag
aagcagaccgaccagctcaaggccgtgcttgcacgtggagaggaaattcaaaaggcagcg
cagaaccaacggatgcgtatgcagagactcggccgcacaatgcttcagacccaccagaac
atcgagaaggaggagcaaaagcgcgtggaacgcaccgcaaagcagcgtctacaggccctg
aaggcaaacgacgaagagacctatctcaagctgcttggtcaagcaaaggatactcgtatc
tctcacttgctcaaacagaccgatggtttcctcggccagttgtctgcctcggtcaaggcc
cagcaacgcagtgctgccgacaggtttggcggagcagctccagactccgattccgaagag
gacgacagcgatctcgacgaagacgatccgaacaggaaggcaaacaaggtcgactactac
gaggttgcccatcgtatcaaggaagaggtctatcagcagtccagcaatctggttggtggc
acactgaaggaataccagctcaagggtctgcagtggatgatatcactgtacaacaacaac
ttgaacggtattctggccgacgagatgggtctcggcaagaccattcagactatcagtttg
atcacgtacttgatcgagaagaagcaacaacctggtccttacctagtcattgtcccactc
agcaccctgacgaactggaacagcgagttcgagaagtgggcgccgagtgttcagcgcatc
gtctacaagggtcctcctcagcagcgtaaacagcaacagcagcagatccgatggggacag
ttccaggttctgctcaccacctacgagttcatcatcaaggaccgtccgattctcagcaag
atcaagtggctccacatgatcgttgatgaaggtcaccgcatgaagaacgccaactcgaag
ctcagcagtactatcacccagtattacaccacgcgttatcgtctcatcctcactggtact
ccgcttcagaacaatcttcccgaactctgggcactgctcaacttcgttctccccaacatc
ttcaagtccgtcaagtcgttcgacgagtggttcaatacaccgttcgcaaacaccggcggt
caagataagatggagctcagcgaagaagagcagctgctcgttattcgtcgtcttcacaag
gtgcttcgtcccttcttgctgcgtcgtctcaagaaagatgtggagaaggatcttcctgat
aagcaagagcgcgtcatcaagtgtaccttctctgcccttcaagccaagctgtacaagcag
cttgtcaatcacaacaggctcatggtcagcgacggcaagggaggcaagactggcatgcgt
ggtctgagcaacatgctcatgcaactgcgcaagctctgtaaccatcctttcgtttttgag
gaggttgaagaccagatcaaccccggtagaggcaccaatgatcttctctggcgcactgcg
ggtaaattcgaactccttgacaggatattgccgaagttccaagtgacgggccacagagtc
ttgatgttcttccagatgacgcaaatcatgaacatcatggaagacttcctacgcctgaga
ggtcttcagtacctacgtctagacggttcgacgaaggccgatgatcggtctgagctcctc
aagctcttcaacgctccgaactccccgtacttctgcttcctcctctccacccgtgccggt
ggtcttggactgaatcttcaatctgccgatactgtcatcatctacgactctgactggaat
cctcatcaggatttgcaagctcaggaccgtgcccatcgtatcggccaaaagaacgaagtc
cgtatcctgcgtctcatcagctcaaattcggttgaagagaagattctggaacgcgccaat
ttcaagctcgacatggacggcaaggtcatccaggccggtaaattcgacaataagtccacc
aacgaggaacgtgacgccatgctgagaatcatgcttgaatctgccgaagctgccgagaac
ctcgagcaagctgagatggatgacgaggatctcaacttgatcatgatgcgttctgatgat
gagctgatcagattccgggaaattgacgagaagcgagccaaggaaggaggatatggtgct
aacaagaaaatgcctcgcctgttctccgaagcagagttgcctgatatctacgtgaacgac
gacactgccattgtcgaggaggtagaggagacgtacggccgcggcgctcgtgagagaagg
tctgtcaagtacgatgacggtctcacggaagagcaatggttggaggctgtcgacaacgac
gaggactccatcgaagcagccatcgcccgcaaagaagcttccaaagcacgacgagctgga
aacaaggagaagcgagtgcttgatgtggtgggcgagtctccacctgtgtctcgtgagagc
tcagaagagccggcgcccaagaagcgtgggcggaagcccaaggctgagaagcgcaaagtg
gatgaagcatctctggatggcgacacgactcctgcacctcgtaagcgtggtcgcggcgcc
aaggccaacgagaccctcagcccggaggaccgctcggcgcttcagaagatcctcaacaac
gtctacgagactctcaacgatctggaagagggaccggcaccaggcgaggatcttgcacca
cgcggcatcatcgaccccttcatccaacttcccgaccgttatgagtaccccgactactac
cagatcatcaccaagccaatctgcatggaccagatcaagaagaagatcaacaagagggaa
taccagcacccacggcagttccgacaagacatgttgctgctctgcaacaactgccgcacg
tacaacgaagacacgagtatcttgtaccaagacgccaacctgatcgaggagacgtgcatt
agcaagctcaaggaggagacggaggagtacccgcagttcgccgacttcgacgaccaaggc
agcgcaagcgtcaggccatcaacaggtccggtttcgagcgcggggacccctctggcttcg
ggtccaggacgtacgtag
DBGET
integrated database retrieval system
