Neofusicoccum parvum: UCRNP2_5545
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Entry
UCRNP2_5545 CDS
T03126
Name
(GenBank) putative rna polymerase ii transcription elongation factor protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
npa
Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npa03021
]
UCRNP2_5545
Transcription machinery [BR:
npa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
UCRNP2_5545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_19
TPR_8
TPR_14
TPR_16
TPR_6
TPR_11
TPR_7
TPR_10
TPR_17
TPR_CcmH_CycH
ARM_TT21_N
TPR_9
ARM_TT21_2nd
ARM_TT21_4th
ANAPC3
TPR_Slam
Motif
Other DBs
NCBI-ProteinID:
EOD47725
UniProt:
R1G869
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MAALNGLANGINGHGHANGAIESKRFSDIPGVIDVTVAEGDVVEQVEIDLVELADDPTEL
CILLENESVVKSTWMTIALAYAKQHKFALAIDILHKARDAFSRAGAEEKLSILSALFWLN
LCMCREAPRLRPDGASPDLRTKEQWIQAATANLNDASRISPSYAPLFLARGVLYLLRASA
ITQTKAGAPDSAERTDALRQAAKCFDDSNRAYGGKNLMATLGKARVQYSLGKYADALQCY
QQVLERAPDMVDPDPRIGIGCCLWQLGHKDDAKNAWQRALELCPDSKTANILLGLYHLNV
SSQYPTSDPAFAPIYKKAMTQYTQKAFKLDDKYPLTCATFGGYFLMRKAMAQVERLSRRA
IDFTDVNAVAGDGWYLLGRKEHYENEISKALEYYQRADTARGGEDRGYLPAKFGIAQIRI
MMQDFEGAKLRLEKIIQQSKSIEAMTLLGTLYAEDVFTAQTSNLKEDKSNELKKAISLLE
GVRSSWKDPKRKVSPDSAVLLNLARLYETDHPEKSLQCLHQVEQMEIDEIPEEDRPEEPQ
APDSKQENYEAAREVHEEAKRAYVNTLRENLPPQLLNNMGCFYYQQEKYAQARELFQSAL
NACVKVGDKDQSVDTDALVTTISYSLARTYEAEGMLDEAKKVYEGLLQRHSDYVDANIRL
TYIKLRQSPQDEGPKAMSELYKAESSNLEVRALYGWYLSKAKKRTNNINEDQEQRHYKHT
LQQYDKHDRYSLTGMGDIYLAIAREMRRDTEQDKEKRRKMYQRAVEFFDKALQLDPKNAY
AAQGIGIALIECNKDFAGAVQLFTKVRETMKDPSVYINLGHVYCELKQYSRAIENYEAAL
AKDRARDATILACLGRVWLLRGKQEKSVQAMKTSLDYSQRALEVAPEQIHFKFNVAFVQI
QIAQLIYQLPENARSLEEVEAAAKGLDDAIEAFIAIAKSPNPPFPRNDIEQRANMGKNTM
RKQLDRAIQSQREYEEKNAAKLKEAREKREAEIRKREEEKRQKEEAEAERLRQIAEERQK
MQERDRELAAKRAEEDKRRDEAEMTTDSETGERKKRAKRKAGGGGKRKKKGDGSDSEGEA
GSDSEGGRRGRRSRRRTTTSATPGVSGDEKPRKAKKRKLERKTKQSSKFKSSEFVQSDDD
SDLEDPAQAANESLAAKVNDAEGMESGEDDAPVTGRHRKRVVDDDEDEDEDGGAAPANGD
VDGDTPMAGLDDDEE
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggctgccctgaacggcctcgccaatggcatcaacggccacggccatgccaatggcgcc
atcgagtcgaagcgcttctccgacattcctggtgtcattgatgtgacggtcgccgagggc
gatgttgtcgagcaggtcgaaatcgatcttgtcgagctggccgacgatcccaccgagctt
tgcatccttctggagaacgagagcgtggtcaagtcaacctggatgaccatcgccttggca
tacgcgaaacagcacaagttcgccctggccatcgacatcctgcacaaggcccgcgatgcc
ttctcgagagctggtgccgaggagaagcttagcattctgagcgctctcttctggctgaat
ctatgcatgtgtcgcgaagcccctcgtctcaggcctgacggcgcgtccccagacctcagg
accaaggaacaatggatccaggctgccacggcgaacctcaacgacgcatcgcgcatcagc
ccctcgtacgcgcccctcttcctcgcccgcggagtcctataccttcttcgcgcctctgca
atcacccaaacgaaagcaggtgcacccgacagcgcagaacgcaccgatgcccttcgccag
gcagcaaaatgcttcgacgattccaatcgtgcatatggaggcaagaacctgatggcaaca
ttgggcaaggcgagggttcaatactcgctaggcaagtatgcagatgctctgcagtgctac
cagcaggtcctcgaaagagctcctgacatggtggatcccgaccctcgcatcggtattgga
tgctgcctgtggcagctggggcacaaggatgacgcaaagaatgcatggcagcgggcgctt
gagctgtgtccggattcgaaaaccgcgaatatcctgcttggcctttaccacctcaacgtc
tcctctcaatatccaacctctgacccagcatttgctcccatctacaagaaggccatgacc
cagtatacgcagaaagcctttaagctggacgacaaatatccactgacctgtgctacattc
ggtggatatttcctcatgaggaaagccatggctcaggtggaacgcctgtcaaggagggcc
attgattttacggacgttaatgctgtggccggtgacggctggtacttgcttggtaggaaa
gagcactatgagaacgaaatttccaaggcgcttgagtactaccagagggccgacaccgcc
cgtggtggcgaagatcgaggctatcttccggccaaattcggaattgctcagattcgaatt
atgatgcaagacttcgagggtgccaagcttcgtctggagaagatcattcaacagagcaaa
agtattgaagccatgactctcctcggcaccttgtacgccgaggacgtcttcacagctcaa
acgtccaatttgaaagaagacaagtccaacgagctgaagaaggccatttctctccttgag
ggtgttcggtcatcctggaaggatccgaagcgcaaagtctcaccagactctgccgtgctg
ctcaaccttgcgcgcttgtacgaaaccgatcatcccgagaagagtctccagtgcttgcat
caagtcgagcagatggagattgatgagattccggaagaggatcgaccggaggaaccgcag
gcaccggactcaaagcaagagaactacgaggctgcgagagaggtccacgaagaggcgaag
cgcgcctatgtcaacacactgcgcgaaaacctcccaccgcagctgctcaacaacatgggc
tgcttttattaccagcaagagaagtatgcccaggctcgagagctgttccaatcggctttg
aacgcctgtgtgaaggtcggtgacaaggatcaatccgttgacactgatgctctcgttaca
accatcagctatagcttggctcggacctacgaagctgagggcatgctggacgaggcgaag
aaggtgtacgaaggtcttctgcagcggcacagtgattacgtcgacgccaacatccgcctc
acctacatcaaacttcgacagagtcctcaagatgaaggtccgaaggccatgtcggagctg
tacaaggcagagtcctcgaaccttgaggtgcgcgctctgtacggctggtacctaagcaag
gcgaaaaagcggaccaacaacatcaacgaggaccaagagcagcgccactacaagcatacc
ttgcaacagtatgacaagcatgaccgttactctctcacaggcatgggcgacatctacctg
gcaatcgcccgcgaaatgcggagagacactgagcaagacaaggagaagcggcgtaagatg
tatcagagggccgttgaattcttcgacaaggctcttcaactagacccaaagaatgcttat
gcagcccagggcattggcattgcactgattgagtgcaacaaggattttgctggcgccgtt
cagctcttcaccaaagtcagggagacgatgaaggatcctagcgtctacatcaacctcggt
cacgtgtactgtgaactcaagcagtactcccgtgcgattgagaactacgaagcagctctg
gcaaaagaccgagcccgggatgctactattctggcttgtctgggccgtgtttggcttctc
agagggaagcaagagaagagcgtccaagccatgaagacatcattggattattctcaacgg
gctctcgaggttgcaccggaacagattcacttcaagttcaacgtcgccttcgtccagatc
caaatcgcccagctcatctaccaacttcctgaaaacgctcgttctttggaggaagttgag
gctgcggcaaagggcttagacgatgccattgaggccttcatcgctatcgcaaagtctccg
aacccgccatttccgcgtaacgacatcgagcagcgcgccaacatgggtaaaaacacgatg
cgcaaacagctggatcgtgcaattcaaagccaacgcgagtatgaggagaagaatgccgcg
aagctcaaggaagctcgcgagaagcgcgaagcagagatccggaagcgtgaagaagaaaag
cgtcaaaaggaggaggctgaggctgaacgtctccgccaaatcgcagaagagcgtcagaag
atgcaagagcgtgatcgtgagcttgcagctaagcgtgctgaggaagacaagcgcagggac
gaggccgagatgacaacggattcagagacgggagaacgcaagaagcgcgctaaaagaaag
gcagggggtggtggcaagcgcaagaagaagggtgacggctccgatagtgaaggggaagct
ggttctgacagcgagggtggccgcagaggccggcgctcccgacgtcggacaacaacgtct
gccacaccaggtgtttctggggatgagaagcctcgcaaggcgaagaagagaaagcttgag
cgcaagaccaagcagtccagcaagttcaagtcgagcgagttcgtgcagagcgacgacgac
tcggacctggaggatccggcacaggcggcgaacgagtccttggctgccaaggtcaacgat
gccgagggtatggagagtggagaagatgatgctccggtgacgggcaggcatcgcaagcgg
gtcgtcgatgacgacgaggacgaagacgaggatggcggggcagcaccggccaacggcgac
gtggatggagacacgcctatggcggggttggatgacgatgaggagtag
DBGET
integrated database retrieval system
