Neofusicoccum parvum: UCRNP2_6089
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Entry
UCRNP2_6089 CDS
T03126
Name
(GenBank) putative cdk-activating kinase assembly factor mat1 protein
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
npa
Neofusicoccum parvum
Pathway
npa03022
Basal transcription factors
npa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
UCRNP2_6089
09124 Replication and repair
03420 Nucleotide excision repair
UCRNP2_6089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npa03021
]
UCRNP2_6089
03400 DNA repair and recombination proteins [BR:
npa03400
]
UCRNP2_6089
Transcription machinery [BR:
npa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
UCRNP2_6089
DNA repair and recombination proteins [BR:
npa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
UCRNP2_6089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
zf-RING_16
FtsA
Spermine_synth
RING_XB3-XBAT31
zf-C3HC4_2
RUBY_RBDX
zf-RING_2
Motif
Other DBs
NCBI-ProteinID:
EOD47185
UniProt:
R1G6S0
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MSRAARRESGPQAAKGSQAVEDGGEQLHARLQQALFLGDCESANTRPAVPDICPVCKSSR
YLNPNMRFLINPECYHQMCESCVDRIYSHGPAPCRIVGCGKTLRKNRFRKKTFEDIQVER
EVDIRRRVAAVFNRREDEFETLEDYNDYLNDVEDITYDLIHRINVEQAEAKLKKYAEANQ
QSIKENEVMAQQEASTWEAQQAVEKEQAKLRREAALREHEQLQRERQEGRRDVINQLASG
QGDASKIAQVHLKRAGQTRVNPSTSRVPSSATAPAPSNGAPSGGFQIKGLKKKVIEVEKP
YDAFGGDTDTREYAVMQDRYDWNWLDDYYSKPVYAAGGCDIKEYYSHALCDAFAGFGIFI
QDEVANKDMPSAPPLATQVAAVAAPAGKGDVSMDDIF
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgagcagcccgccgcgagagcggcccccaggctgcaaagggctcgcaggcagtt
gaggacggcggtgagcagctgcacgcccgtcttcagcaagctttgttcctgggcgactgt
gagagtgctaacacgcgtcctgccgtcccagacatctgccccgtgtgcaagtcgtcgcgc
tacctcaaccccaacatgcgcttcctcatcaacccggagtgctaccaccagatgtgcgag
tcgtgcgtcgaccgcatctactcccacggccccgccccgtgcaggatcgtcggctgcggc
aagaccctgcgcaagaaccgctttcgcaagaagacgttcgaggacatccaggtggagcgc
gaggtggacatcaggcggcgcgtggcggcggtattcaaccgccgcgaggacgagtttgag
acactagaggactataacgactacctgaatgatgttgaggacatcacgtacgacctcatc
caccgcataaacgtcgagcaggccgaggcgaagcttaaaaagtatgccgaagcgaaccag
cagtccatcaaagagaacgaggtcatggcccagcaggaggcctcgacatgggaggctcag
caggcggtagagaaggagcaggccaagcttcggcgtgaagcggcactgcgcgagcacgag
cagctacagcgagagcgccaggagggcagaagagacgtcatcaaccagctcgccagcggc
cagggcgacgcctcgaagatcgcacaggtccacctcaagcgtgccggtcagacccgcgtc
aacccctccacctcgcgggtccctagcagcgcaaccgcgccggcaccttccaatggtgct
cctagcggtggcttccaaatcaagggtctcaagaagaaggtcatcgaggtggagaagccg
tacgatgcttttggcggagacaccgacacgcgcgagtacgcggtcatgcaagaccgctac
gactggaactggctggacgactactactcgaagcctgtatacgcggctggcggctgcgat
atcaaggagtactactcacacgctctgtgtgatgccttcgctggcttcggtatcttcata
caggacgaggttgcgaacaaggacatgccgagcgcaccgccactagcgacgcaagtagca
gccgtggctgccccggccgggaagggtgatgtgagcatggatgatattttctga
DBGET
integrated database retrieval system
