Neofusicoccum parvum: UCRNP2_6249
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Entry
UCRNP2_6249 CDS
T03126
Name
(GenBank) putative dna mismatch repair protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
npa
Neofusicoccum parvum
Pathway
npa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
UCRNP2_6249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npa03400
]
UCRNP2_6249
DNA repair and recombination proteins [BR:
npa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
UCRNP2_6249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
UPF0242
DUF1564
Motif
Other DBs
NCBI-ProteinID:
EOD46992
UniProt:
R1EHN4
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MSTPKPAKGKKSTPASNQKSILGFFQRKPDSSQTPTQAPKSSPTPLPAHSAQKSAKAKKS
SPNALTPAPSSDAIEPSSPVRSDASDSGRNKENEGTADPQENSPSRKGKKQVNYAESDAC
SDDEDDVFKPVSANGTNKRAVKRRKVAALDDSDSDEFGPNAFDDEDDDVDDFIVPDDSDE
EPVSKKRKRPSAASSRKASKPSSPPAPESPLADDDDVIMEGNSSSTAQQWRFDPENPSAV
GVRPPPQATKKKEGNQKEKAYKTEPENRYPWLAHVLDADRNPQGHPDYDPRTLYIPPGAW
NKFSPFEKQYWEIKSKFWDTIVFFKKGKFYELYENDATVGHQLFDLKLTDRVNMRMVGVP
ESSLDMWANQFVAKGYKIAKVDQMESALGKEMRERGGPAKKEDKIIRRELSSVLTSGTLV
DGAMLQDDMSTYCVAIKEVDRDNLPVFGIAFVDTATAQFQLCEFVDDADMTKFETFVAQT
RPGELLLEKSCISAKALRILKNNTSPTTIWNYLKPGKEFWSADTTSREVEASDFFVSPDQ
DNIEVWPKVLRDAKENHESAMSAFGALFQYLRLLKIEKDLVTLGNFAWYDPIRKATSLVL
DGQSLINLEIFANSFDGGTEGTLFAMLNRCITPFGKRMLKQWVCHPLADARKINQRLDAV
DALNADTTVMDRFTASLSKLPDLERLLSRVHAGRIKAQDFVKVLEGFEQIEYTMSLLSEF
GEGEGVIGQLISQMPDLAKSLKDWRDAFDRKAAKNDGILVPEEGVEEDFDQSKQEIDEVL
ADLDKLLKQYRRELGSTTICYKDNGKEIYQLEVPVKIKNVPKNWDQMSATAKVKRYYSPE
LRKLVRRLQEAQETHGQIIKEVAGRFYARFDENYTTWLAAVKIVAQLDCLISLAKASASL
GEPSCRPKFVDSERAVLEFEELRHPCMLTNVTDFIPNDIKLGGQVPNIDLLTGANAAGKS
TVLRMTCIAVILAQVGVYLPCTSATLTPVDRIMSRLGAQDNIFAAQSTFFVELSETKKIL
SEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHIGCLGFFATHYHSLATEFSGHPE
IAAKRMAIHVDEEERRVTFLYRLEDGVAEGSFGMHCAAMCGINPKVIERAEVAAKEWEHT
SRLKESLEKARESCYVPLGVQSDVAWLLRENVGEDAVEERGLDVLMRAIEAL
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactccaaagcccgccaagggcaagaagagcacccccgcctccaaccagaagtcc
atccttggcttcttccagcgcaaacccgattcctcgcagacgcccacccaggcgcccaag
tcgtctcccacgccgctgccggcacactcggcccagaagtcggccaaggcgaagaagagc
tcgcccaatgccttgacgcccgcacccagcagcgatgccattgagccgtccagccccgtc
cgcagcgacgcctccgacagcggcaggaacaaggagaacgaaggcaccgccgaccctcaa
gagaacagcccctcccgcaagggaaagaagcaggtcaactacgccgagtccgacgcctgt
agcgatgacgaggacgacgtcttcaagcctgtctcggccaatggaacgaacaagcgtgcg
gtgaagcggaggaaggtagccgccttggatgactcggacagcgacgagtttggtcccaac
gccttcgacgatgaagacgacgatgtggatgacttcatagttccagacgactccgacgag
gagcccgtctcaaagaagcggaagcggccctctgctgcgtcctcccgcaaggcctcgaag
ccttcttcgccacctgctcccgaatcccctctggccgatgacgacgatgtaattatggag
ggcaactcttcttcgaccgctcagcagtggcgcttcgacccggaaaaccccagtgctgtg
ggcgtccgcccaccgcctcaagcaacaaagaagaaagaaggcaatcagaaggaaaaggcc
tacaagacggagcccgagaaccgctacccgtggctggctcatgtcttggatgccgacagg
aatcctcagggtcatcctgactacgaccctcgcactctctacatcccgcctggcgcttgg
aacaagttttcccccttcgagaaacagtactgggaaatcaagagcaagttctgggacacc
attgtgttcttcaagaagggcaagttctacgagctatacgaaaacgatgccactgttggt
caccaactgtttgacctcaaactcaccgaccgtgtcaatatgcgcatggttggtgtcccc
gagtcgtccctcgacatgtgggccaaccagttcgtcgcaaaaggctacaagatcgccaag
gtcgaccagatggagtccgctctcggaaaggaaatgcgtgaacgtggtgggcccgccaag
aaagaagacaaaatcatccgccgcgagctatcgtctgtgctcacttccggtactcttgtt
gacggtgccatgctgcaagacgatatgtctacctactgcgtagccatcaaggaggttgac
agagacaacctgcccgtattcggtattgcattcgtcgatactgcgactgctcagttccag
ctctgtgaattcgtggatgacgcggacatgaccaagtttgagacttttgtcgcccaaact
cgtcccggcgagcttcttctcgaaaaatcctgcatttccgcaaaggcgcttcgaatcctc
aagaataataccagccccaccaccatctggaattatctcaagccgggtaaagagttctgg
tctgccgacactacctcgcgtgaggtcgaagccagcgacttcttcgtttcccccgaccaa
gacaacattgaggtctggcccaaggtcctgcgggatgccaaggagaaccatgagtcggcg
atgtctgcctttggcgctctattccaataccttcgactgctcaagattgagaaggatctc
gtcacgctcggcaactttgcgtggtacgacccgatccggaaagccaccagcctggtcttg
gatggtcaaagtctcatcaacctcgagatcttcgccaacagcttcgatggcggtaccgag
ggtactctgttcgctatgctcaacaggtgcattactcccttcggcaagcgcatgctcaag
caatgggtttgccaccctctcgccgacgctcgcaagatcaaccaacgtcttgatgctgtt
gatgcgctcaatgctgatactaccgtcatggaccgcttcaccgcttccttgagcaagctt
ccagaccttgagcggcttttgtccagagtccacgctggaaggattaaggcgcaggacttt
gtgaaggttctcgagggcttcgagcaaattgagtacaccatgagcctcctcagcgagttt
ggcgagggtgagggtgtcatcggtcagctcatctctcaaatgccggaccttgcaaagtct
ctcaaggactggagagatgcttttgaccgcaaggcagccaagaacgacggaattctcgtt
cccgaggaaggtgtcgaggaagactttgaccagagcaagcaagaaattgacgaggtgctt
gctgatctggacaagttgttgaagcagtaccgacgagaactcggttctaccactatctgc
tacaaggacaatggtaaagaaatctaccagctcgaagtccccgtcaagatcaagaacgtt
cccaagaactgggatcaaatgtccgccactgccaaggtcaaacgctactacagcccagag
cttcgtaagctggtccgaagactccaagaagctcaggaaacgcacggccagatcatcaag
gaggttgctggaaggttttacgccaggtttgacgagaactacactacctggctggctgct
gtcaagattgttgctcagcttgactgtctcatcagcttggcaaaggcttctgcttcgttg
ggcgagcccagctgccgaccaaagtttgtcgacagtgagcgggctgtcctcgagtttgag
gaactccgtcacccctgtatgcttacgaacgtcaccgatttcatcccgaacgacatcaag
cttggtggccaggttccgaatattgatctcctcaccggtgccaacgctgccggtaaatca
actgtcttgcgcatgacttgtattgctgtcatcctcgcacaggtcggggtttatctccct
tgcacgtcagccacgctcacacctgtcgaccgtatcatgtcgcgtttgggtgcgcaggac
aacatctttgctgcccagtccaccttctttgttgagctgtcagaaacaaagaagatactg
tccgaggccacccctcgttccctcgtcattttggatgagctgggccgtggcacctcatct
tatgacggtgtggccgttgctcaggctgtcctccatcacgttgccactcacatcggctgt
ctcggattcttcgcgacgcattaccactctctagccaccgaattctccggtcaccccgag
atcgcggccaagcgcatggccatccacgtcgacgaggaggagcgccgcgtgacgttcctg
taccgtctcgaggacggcgtcgcggagggctctttcggcatgcactgcgcggccatgtgc
ggcatcaacccgaaggtcatcgagcgcgccgaagttgcggccaaggagtgggagcacacg
agcaggctcaaggagagcttggagaaggctcgcgaatcttgttacgtgcctttgggcgtg
cagagcgatgttgcgtggttgttgagggagaatgtgggcgaggatgccgtcgaggagcgc
ggtctggacgtgctgatgagggccattgaggcgttgtaa
DBGET
integrated database retrieval system
