Neofusicoccum parvum: UCRNP2_6472
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Entry
UCRNP2_6472 CDS
T03126
Name
(GenBank) putative nuclear and cytoplasmic polyadenylated rna-binding protein pub1 protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
npa
Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_6472
03041 Spliceosome [BR:
npa03041
]
UCRNP2_6472
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
UCRNP2_6472
Spliceosome [BR:
npa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
UCRNP2_6472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_10
RRM_7
RRM_8
RRM_PARP14_3
Motif
Other DBs
NCBI-ProteinID:
EOD46782
UniProt:
R1EGY4
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSDTAASGANLPPPPASAGAPGYDNGAQGNPQASQGHMPPPPLAPVIIPQNTNPIPTAIS
SPMSGGVMSPTSAGGYVRRAAPEPNKRALYVGGLDPRITEDVLRQIFETAGHVVSVKIIP
DKNSKGLNYGFVEYDDPGTAERAMQTLNGRRVHQSEIRVNWAYQSNNQPKEDTSNHFHIF
VGDLSNEVNDEVLLQAFSAFGQVSEARVMWDMKTGRSRGYGFVAFRDRSDAEKALSSMDG
EWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPYGHHHFPTHGVQSYEMVVNQTPQ
WQTTCYVGNLTPYTTQSDLVPLFQNFGYVVETRFQSDRGFAFIKMDTHENAAMAICQLNG
YNVNGRPLKCSWGKDRPPTGQFDGYSPAGGPNSAYPPTPNAYFPQYGGPGGPMGSPQGPS
PGGQPFAQNQGGFGGPAMAQPYQQMPGSAGGFGRGNAGAQQWAQPTPGGFGQVNNGFQGY
SG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaccgctgcctccggcgccaatctccccccgcccccggcctccgctggcgcg
ccgggctacgacaatggcgcccagggcaacccccaggcctcccagggccacatgcctccg
ccgccgctcgcccccgtcataatcccccagaacacgaaccccatcccgacggccatcagc
tcgcccatgtccggcggcgtcatgtcgcccacctccgccggcggctacgtgcgtcgcgcc
gcccccgagccgaacaagcgcgccctgtacgtcggcggcctggatcctcgcatcaccgaa
gatgttctgcgccagatctttgagactgctggtcacgtcgtgagcgtcaagatcatcccg
gacaagaactccaagggcctgaactacggctttgttgagtacgacgaccctggcacagct
gagcgcgccatgcagaccctgaacggccgccgcgtccaccaaagcgaaattcgcgtgaat
tgggcctaccaatcaaacaaccagcccaaggaggacacgtccaaccacttccacatcttc
gtgggcgacctgtcgaacgaagtcaacgatgaggtcctcctccaggctttctccgctttc
ggtcaggtttccgaggcgcgcgtcatgtgggacatgaagacgggtcgctctcgtggttac
ggtttcgtcgcattccgtgaccgttccgacgccgagaaggccctgagctccatggacggc
gagtggcttggttcgcgtgctattcgttgcaactgggcaaaccagaagggccagccgtcc
atctcgcagcagcaggccatggcctccatggggatgacgcccacgacgccgtacggccac
caccacttccccacccacggcgtgcagtcgtacgaaatggtggtcaaccagacgccgcag
tggcaaaccacgtgctacgtcggcaacctgactccgtacacaactcagtccgatcttgtt
cctctgttccagaatttcggctacgttgttgagactcgcttccagagcgaccgcggcttt
gctttcatcaagatggatacccacgagaacgctgccatggccatctgccagcttaatggc
tacaacgtcaacggacgcccgttgaagtgcagctggggcaaggaccgtcccccgactggc
caattcgatggatattccccggcgggcggccccaactctgcctacccgcccactccgaac
gcctacttcccgcagtacggtggacctggtggacccatgggctctcctcagggccccagc
ccaggaggtcagccttttgcgcagaaccagggcggcttcggcggccctgccatggctcag
ccctaccagcagatgccgggcagcgctggaggcttcggccgtggcaacgctggtgctcag
cagtgggctcaaccgacgcctggcggcttcggccaagtcaacaacggcttccagggatac
tcgggctaa
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integrated database retrieval system
