Neofusicoccum parvum: UCRNP2_6557
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Entry
UCRNP2_6557 CDS
T03126
Name
(GenBank) putative pre-mrna splicing factor protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
npa
Neofusicoccum parvum
Pathway
npa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRNP2_6557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npa03041
]
UCRNP2_6557
Spliceosome [BR:
npa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
UCRNP2_6557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-ProteinID:
EOD46709
UniProt:
R1GL34
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MSTLADELLNDFDDSGDENEEEQSNEPAQDDGVASLFPADGPAPQVQAGGEEGGMELDGD
EEEVDEDEELMSGAAAKQARDAPEDEEETKARVEKMQLGNVNDVRSVAGLMKTLQPVLEK
IAHYKGLPPDKQTKNIGSIEDNPEYKLLTQSNTLATSIDSEIILVHKFIRDHYSIRFPEL
ETLVTNPLDYAKTVAIIGNGPMDAESIKKQSSSSDNIVGQPLNKVLDGPSMMVVTVESTT
SQGRELTESELDTVLKACEMTLQLDEAKKILTEYVQSRMNMFAPNLTALIGSLTAAQLIN
YAGGIKGLSKTPACNISILGSKKQTGTGFATNTSIRHQGYLYHSELIRHIPTDLKKQAMR
IVSAKIVLAARVDSIHSSSDGSTGEELKQQCLDRLDKLTEPPPNKGVRALPVPDDKPSRK
RGGRRVRKAKEAYAMTELRKAQNRMAFGKEESEVGYGTGEGTKGLGMIGQGNDGRIRATQ
IDQRTKAKLSKKNPGWGGATPVSGMASTMRGAGTAGNVSVLKGHGLRTSGVNTGGTASTI
AFTPVQGLELVDPKVREEMNRKRKAEEDRWFSGGTFTQIGGSKSEAGGKKDADGFKVPSL
PVKKQKQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctcgcagacgagctcttgaacgacttcgatgattcgggtgatgagaatgag
gaggagcagagcaatgagcccgcccaggatgatggcgtcgcctctctctttccggctgat
gggccagcaccccaggtgcaagctggcggcgaagaaggcggcatggaacttgacggcgac
gaagaggaggttgacgaagacgaggagttgatgagcggcgcggctgcaaagcaggcccgc
gatgcgcccgaggatgaggaggaaacaaaggccagggtggagaagatgcagctgggaaac
gtcaacgacgtgcggagcgtggccggcttgatgaagacgctgcaaccggtgctagagaaa
attgcacattacaaaggactgccgccggataagcagaccaagaacatcggctccatcgag
gacaatccggagtacaagctgcttacccagtccaacaccctcgccacatctatcgacagc
gagattattctggtccataagttcatcagagaccactactccattcgttttccggagctt
gagacgctggtcacaaatcctctggactatgcgaagaccgtcgccatcatcggaaatggc
cccatggacgcagagtcaatcaagaagcagtcgtcgtcttcagacaatattgtcggccag
cctcttaataaggtcctcgacggcccctccatgatggtcgtaaccgtcgaatccacgaca
tcccaaggacgagaactcacagaatcggagcttgacaccgttctgaaggcctgcgagatg
acgttacagcttgatgaggcgaagaagatcctgaccgaatacgttcaatcacgtatgaac
atgttcgctcccaatctgactgccctcattggatcacttactgccgcacaactcatcaat
tatgctggaggtatcaagggcctctcaaagacacccgcttgcaacatctcaatcctcgga
tccaagaagcagacgggaaccggatttgccaccaacaccagcatcaggcaccagggctat
ctctaccactctgagctcatccgccacatccccacagatctgaagaagcaagctatgcgg
attgtctcggcgaagatcgtactcgcagcccgagtcgatagcattcacagcagctcagat
ggatccactggcgaggaactgaagcagcagtgtctcgaccgtctcgacaagcttaccgag
ccgccgcctaacaagggtgtgcgggccctccctgttccggatgacaagccttcgcggaag
cgtggtggtcgacgcgtccgcaaggctaaggaagcttatgctatgacagaattgcgcaag
gcacagaatcgtatggcgtttggtaaagaggagtctgaggttggttatggtacgggcgag
ggcaccaagggtctcggcatgattggccaaggcaacgacggacgcatccgcgccacgcag
atcgaccagcgcaccaaggcgaaactgagcaagaaaaaccctggttggggcggcgcgacg
ccggtgagtggtatggcatccaccatgcgcggtgccggcactgctggaaatgtcagcgtg
ctgaagggccatggactgaggacttcgggcgtcaacactggtggtacggcgtcgacgatt
gccttcacgcccgtgcagggtcttgaattggtcgacccgaaggtccgcgaggagatgaac
cgcaagaggaaggccgaggaagacagatggttcagtggaggcactttcactcagattgga
ggttcaaagtctgaggccggtggcaagaaggatgcggacggcttcaaggtgccaagcctg
ccggtgaagaagcagaagcagtaa
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