Neofusicoccum parvum: UCRNP2_6862
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Entry
UCRNP2_6862 CDS
T03126
Name
(GenBank) putative pre-rrna processing protein
KO
K14799
pre-rRNA-processing protein TSR1
Organism
npa
Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npa03009
]
UCRNP2_6862
Ribosome biogenesis [BR:
npa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
UCRNP2_6862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_3
RIBIOP_C
Tsr1_G-like
AARP2CN
eEFSec_4th
Motif
Other DBs
NCBI-ProteinID:
EOD46415
UniProt:
R1G4S8
LinkDB
All DBs
Position
Unknown
AA seq
1286 aa
AA seq
DB search
MALRLGSKRVCAALRAPRPFAFAPVSVQRYASSAATAASSLPNGVKESIEREASLATPDP
AADSQTTRLVNDQMPYMVPTYVRPPPMFHKGEGCYLYDVENRKYLDFTAGIAVNALGHCD
PQMVKLMAEQAQTLIHTSNLYHNPWTGALSKLLVEKTVAGGGMHTAEKTFICNSGSEANE
AAIKFARKVGKELDPSGEKYELVSFHSSFHGRTMGSLSATPNPKYQKPFAPMVPGFRYGT
YNDIEAIPSLVTESTCGVIIEPIQGEGGVNVATPEFLLALRKRCTEVGAVLIYDEIQSGL
GRTGQIWAHAALPKEAHPDILTTAKALGNGFPIGATIVNDFVVSKIKPGDHGTTFGGNPL
ACRLAHDIVGRLADPQLHQSVLKKEQIFRQHFEKLKQRFPDVITEIRGKGLILGLQLNQD
PTPILTAARERGLLIITCGTNTLRFVPPLIISEAEIEQGINILEDAMNAVFKNTTKVSHK
PYKSRHASKSALKEQSKGKIDSGDRGARRTPHQQVLSKLDRRNQAKQKRVGKHAEHVEAT
RVFAGRDGAPRVVAVVPLADDVSGRLAVGSLNGCLDLDVGAADVPEQGALRVEVERFKQR
VQYLVVGRGLLQALDACRVADFVLFVLSAEQEVDALGELVLRSVESQGVSNVLAAVQGLD
SAEPAKRRPQILGSLKSFITHFFPAQEKVHSLDNRQECLNLMRSLCTSMPKGVRWREERS
WMAVEDVRWPSGKAAATEEEAKGDVVLTGVVRGKGLKADRLVEVGDWGTFQIEKITAAPL
ATRKKGKGEDMAVDMEGQDAVLDQPTEDQDDLAELAPEEAVMEDADDYPVSIAPSERKGV
LLDDHHYFSEDEEAPRPKRLPRGTSKYQSAWYIDELSDSGSDLESVAGDDDGDFDMDGPA
NPADGMEGLDINGREPTEAAPSEYPQSEMFMDPSPDDEAEQIEAYRTERKKEAEDDLEFP
DEIELHPQVLARERLIKYRGLKSLRTSTWETDEDRPYEPDYWRRLLEISDYKGAKSRVLR
EALVGGVQPGTRVNVHLRNVPLSLQSTYNPAHTLALFSLLRHEHKRTAVNYSITLSSDYE
EPIKSKEEMIVQCGPRRFRINPVFSASGNTPNDVHKFDRFLHPGRSAIATFVAPITWGSV
PALFFRRAVAEEDEGADGEDTAMEADKAADAEGEVQLIGTGTSLAPSTSRVISKRIILTG
HPYKIHKRVVTVRYMFFNSEDVQWFKALQLWTKRGRSGFIKESLGTHGYFKATFDGRINP
QDSVGVSLYKRVWPREARALEAGEAL
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggcattgcgacttggttccaagcgcgtttgcgctgctctgcgcgcccccaggcctttc
gccttcgcgcccgtctctgtccagcgttatgcgtcatccgcggcaacggcagcttcgagc
ttgcccaacggcgtaaaggagtctatcgagagggaggcttctcttgcgacccccgaccct
gctgccgactcgcaaacgacccgcctagtcaatgaccagatgccgtacatggtccctacc
tacgttcgcccaccgcctatgttccacaagggagagggttgctatctttacgatgtggag
aaccgcaagtacctggacttcacggccggtattgccgtgaatgcgctcggccactgcgac
ccgcaaatggtcaagttgatggccgagcaggcgcagaccctcatccatacttcgaacctt
taccacaacccctggaccggtgctctgtctaagctgctggtcgagaagacggtggctggc
ggtggcatgcacactgccgagaagaccttcatctgcaactcgggctcagaggcgaacgag
gcggccatcaagttcgcgcgcaaggtcggcaaggagcttgacccgtcgggtgaaaagtac
gagctcgtttccttccacagctccttccacggccgcaccatgggctccctgtccgcgacc
ccgaaccccaagtaccagaagcctttcgcgcccatggtgcctggattcagatatggcacc
tacaacgacatcgaagcaattccatcgctggtgaccgagagcacctgcggtgtcataatt
gagcccattcagggtgagggtggtgtcaatgttgcgacgcccgagttcctgcttgctctc
cgcaagcgttgcaccgaggtcggcgcagtcctcatttacgacgagattcagagcggtctc
ggtcgcaccggtcaaatctgggcgcacgccgcgctgcccaaggaggcgcacccggacatc
cttacaacggcgaaggctctcggcaacggcttccccattggcgccaccatcgtcaacgac
ttcgtcgtgtcgaagattaagcccggagaccacggcaccaccttcggaggcaacccgctg
gcttgcagactggcacacgacatcgttggcaggctggcagacccgcagctgcaccagtcg
gtcctgaagaaggagcagatcttccgccagcacttcgagaagctgaagcagcgcttccct
gacgtgattacggagatcaggggcaagggtctgattctgggtcttcagctgaaccaggac
cccacgcccatcctgactgctgctcgtgagcgtggtctgctcatcatcacttgcggtacg
aacacgctcaggttcgttcctccgttgattatcagcgaggcggagattgagcagggtatc
aacattttggaagatgccatgaatgctgtattcaagaacaccaccaaggtgtcgcacaag
ccctacaagtcgcggcacgccagcaagagcgcgctgaaggagcaaagcaagggcaagatc
gactcgggcgaccgcggcgcccgccgcacgccgcaccagcaggtgctgtcgaagctggac
cggcgcaaccaggccaagcagaagcgcgtgggcaagcacgccgagcacgtcgaggcgacg
cgggtgttcgcggggcgcgacggcgcgccgcgcgtcgtggcggtcgtgccgctggccgac
gacgtgtcgggcaggctggcggtcggcagcctgaacggctgcctcgacctcgacgtgggc
gccgcggacgtgcccgagcagggcgcgctgcgcgtcgaggtcgagcgcttcaagcagcgc
gtgcagtacctggtcgtcgggaggggcctgctgcaggcgctggacgcgtgccgcgtcgcg
gactttgtgctgttcgtgctcagcgccgagcaggaggtcgatgcgctgggggagctggtg
ctgaggagcgtggagagccagggcgtgtcgaacgtgctggctgcggttcagggtcttgat
tcggctgagcctgcgaagcgccgtcctcagatcctcgggtccctcaagtcgttcatcacg
cacttcttccccgcgcaggagaaggtgcactcgctggataacaggcaggaatgcttgaac
cttatgcggtcgctctgcacaagtatgccgaagggtgttaggtggagggaagagcgcagc
tggatggctgtggaggatgtcagatggcctagtggcaaggcggcagcgactgaggaggaa
gcaaagggcgatgtcgtactcacaggtgtggtgagaggcaagggtctgaaggcagacagg
ctggtagaggttggagactggggcacgttccagatcgagaagatcactgctgctcccctt
gcgacccgtaagaagggcaagggtgaggatatggccgtcgatatggagggccaggacgcc
gtattggaccagccgaccgaggaccaggatgatttggccgaacttgcgccagaggaggcg
gttatggaggatgccgacgactacccagtctccatcgcgccttcagagcgtaagggtgtg
ctcctggacgatcaccactacttctctgaggacgaggaggccccgcgccccaagagatta
ccgaggggaacgtccaaataccagtctgcgtggtacatcgatgaactttcggattccggg
tctgacctcgagagcgtggcaggggatgatgatggagatttcgacatggacggtccagcc
aacccagccgatggaatggagggcctagacatcaatggcagagagccaacggaggctgct
ccttcggaatacccgcagtccgaaatgtttatggatccgtctcccgatgatgaggccgag
cagatcgaagcataccgcaccgaacgcaagaaagaggcggaagacgatcttgagttcccc
gacgaaatcgaactacacccgcaggttcttgcgcgggagcgtctcatcaaatacagagga
ttgaagagcttgaggacgagcacctgggagacagatgaagacaggccgtacgagccggac
tactggagacgacttctggagatttcggactacaagggcgcaaagtcgcgtgttctgaga
gaagctctcgttggcggtgtccagcctggtacccgcgtcaacgtgcaccttcgcaacgtg
cctctatctcttcaaagcacatacaacccggcccatacgctggctctcttctcgcttctg
cgccacgagcacaagcgcactgccgtgaactacagcatcacgctcagctcagactacgag
gagcctatcaagagcaaggaagagatgattgtgcagtgcggtcccagacgcttcagaatc
aacccagtcttctcggcatctgggaacacaccgaacgacgttcacaagttcgacagattt
ttgcatcccggacgcagcgcgatcgcaacatttgtggcgccaatcacctggggctctgtc
cccgcacttttcttcaggcgcgctgtggccgaagaagatgagggcgcagacggcgaggac
acggcgatggaggctgacaaggctgctgatgctgagggcgaggtgcagctcatcggcacg
ggcacgtcgctggcgccgtcgacgtcacgggtgatctcgaagcgcatcattctcacgggc
cacccgtacaagatccacaagcgggtagtgacggtgcggtacatgttcttcaactcggag
gacgtgcagtggttcaaggcgctgcagctgtggacgaagcgcgggcgcagcgggttcatc
aaggagagcctgggcacgcacggctacttcaaggcgacgtttgacgggcgcatcaacccg
caggactcggtgggcgtcagcctgtacaagcgcgtgtggccccgcgaggcgcgtgcgctc
gaggcgggggaggcgctctag
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