Neofusicoccum parvum: UCRNP2_7103
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Entry
UCRNP2_7103 CDS
T03126
Name
(GenBank) putative replication factor a rfa1 protein
KO
K07466
replication factor A1
Organism
npa
Neofusicoccum parvum
Pathway
npa03030
DNA replication
npa03420
Nucleotide excision repair
npa03430
Mismatch repair
npa03440
Homologous recombination
npa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UCRNP2_7103
03420 Nucleotide excision repair
UCRNP2_7103
03430 Mismatch repair
UCRNP2_7103
03440 Homologous recombination
UCRNP2_7103
03460 Fanconi anemia pathway
UCRNP2_7103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npa03000
]
UCRNP2_7103
03032 DNA replication proteins [BR:
npa03032
]
UCRNP2_7103
03400 DNA repair and recombination proteins [BR:
npa03400
]
UCRNP2_7103
Transcription factors [BR:
npa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
UCRNP2_7103
DNA replication proteins [BR:
npa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
UCRNP2_7103
DNA repair and recombination proteins [BR:
npa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
UCRNP2_7103
MMR (mismatch excision repair)
UCRNP2_7103
DSBR (double strand breaks repair)
HR (homologous recombination)
UCRNP2_7103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-ProteinID:
EOD46186
UniProt:
R1GD65
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MASELAEQAARAISRRSLLGIFEKGPESGENATLQCVQIKHMDNKSGEERYRIVLSDIDN
FIQSMLAQQMNHVITSGQLKKGSIIRLKSFNPQVIKERKILVVLDLDVLSEYGELEKLGT
PKGLEAADSAPKTEEKDTQPADIGGNGFYGNKPVKREQSSLPSRPSAPPAGLAQLFPIEA
LSPYTHKWTIKARCVQKSDIKTWHNKNGEGKLFSVNLLDESGEIRATGFKDQCDAFYDLF
QEGSVYYISGCSVKLAKKQFSNVNNDYELTFQNDTQIEKAEDADGVPQVRYNFINIGDLQ
TVEPNTTIDTIGVLKDVGEVSEIVSKTTSKPFSKRELTLVDDSMHSVRLTIWGPTALNFD
ASPESVIAFKGVKVSDFGGRSLSLLSSGTMNANPDIDEAHKLKGWYDAQGRNDQFQSHQQ
SGTGASRSRKNKTIGQVNDEGIGMTDQAEYFNLKATIVYVKHDTFAYPACASEGCNKKVV
EVNPGEWRCEKCEVTHPRPEYRYIMSCNVSDHTGQMWLSCFDDSGRLIMGMPANDLMEMK
ENEETPGKADQAFVDATCKTFIFNVKAKMDTFQDQQRVRYQVSSIRPLDYKTECATLIET
LKAYQLDADSLFVN
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgagttggctgagcaggccgcgagggccatctctcgcaggtccctgctgggc
atcttcgagaagggacccgaatctggtgaaaatgcgacgctgcagtgcgtgcagatcaag
cacatggacaacaagtccggcgaagagaggtatcgcattgtcctcagcgatatagacaac
ttcattcagagcatgcttgctcagcagatgaaccatgttatcaccagtggccagctgaag
aaagggtcaatcattcgcctgaaatcgtttaatccccaagtcatcaaggagcggaagatc
ctcgttgtcctcgaccttgacgtcctttctgagtatggcgaactggagaaattgggaacg
cccaaaggtcttgaagccgccgactccgcacccaagactgaggagaaagatacgcagccc
gcagacatcggtggcaacggcttctacggcaacaagcctgtcaagcgcgagcagtcgtca
cttccatcccgcccaagtgctccacccgcaggacttgctcagctcttccctattgaggcg
ctgtcgccatacacacacaagtggacaatcaaggcgcgctgcgtacaaaagagcgacatc
aagacatggcacaacaagaatggtgagggcaagctattcagcgtgaaccttctcgacgag
agcggcgaaatcagagccaccggtttcaaggaccagtgtgacgctttttacgacttgttc
caggagggcagcgtctactacatctcgggctgcagcgtcaagctagcaaagaagcagttc
tcgaacgtcaacaacgactacgagctcactttccagaatgacacgcaaatcgaaaaggca
gaagacgcagacggcgttccccaagtccgctacaacttcatcaacattggggatctccag
accgtggaaccgaacacgacgatcgacaccattggtgttttgaaggatgtcggcgaggtc
tcggagattgtctccaagaccacgagcaagcccttctccaagcgtgaactgacccttgtt
gacgacagcatgcactctgttcgcctgactatctggggcccgactgctttgaactttgat
gcctctcctgagtccgttattgcgttcaagggagtcaaggtatccgattttggtggtcgt
agcttgagcttgctgagttctggtaccatgaacgccaacccagacattgacgaggcacac
aagctcaagggctggtacgatgctcagggccgcaacgaccagttccaatcgcaccagcag
agcggcaccggtgcctctaggtccagaaagaacaagactatcggccaggttaacgacgag
ggcatcggcatgactgatcaggcggagtacttcaacctaaaggccacgattgtgtacgtc
aagcacgacacctttgcctacccggcttgtgcgagcgagggctgcaacaagaaggttgtc
gaggtaaacccgggcgagtggaggtgcgagaagtgcgaagtcactcacccaaggcctgaa
taccgctacattatgtcgtgcaacgtcagcgatcacaccggtcagatgtggctaagctgc
ttcgatgactctgggagactcatcatgggtatgccagcgaatgacctgatggagatgaag
gagaacgaggagactcccggcaaggccgaccaggcgtttgttgatgcgacgtgcaagacc
ttcatcttcaacgtcaaggcgaagatggacaccttccaggatcagcagagggtccggtac
caggtttccagcattcgtcctctggactacaagaccgagtgcgccacactcatcgagacg
ctcaaggcgtatcagctcgatgcggacagcctgttcgtcaactag
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