Neofusicoccum parvum: UCRNP2_7398
Help
Entry
UCRNP2_7398 CDS
T03126
Name
(GenBank) putative transcription elongation factor spt6 protein
KO
K11292
transcription elongation factor SPT6
Organism
npa
Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npa03021
]
UCRNP2_7398
03036 Chromosome and associated proteins [BR:
npa03036
]
UCRNP2_7398
Transcription machinery [BR:
npa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
UCRNP2_7398
Chromosome and associated proteins [BR:
npa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
UCRNP2_7398
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Spt6_S1
SPT6_acidic
Tex_central_region
SH2
HHH_9
B12-binding
Motif
Other DBs
NCBI-ProteinID:
EOD45887
UniProt:
R1EEI5
LinkDB
All DBs
Position
Unknown
AA seq
1424 aa
AA seq
DB search
MAHPLLDVAAELGSESDDADYDEEQAPKGQGKPSRRSGAVDDSSEEEDEDDDEEAAAAVR
EGFIVDEDEEDEEERRARRREKKKRRRAEREEEEAALDEEDLDLIGETVPREQTTQSKFK
RLKRGHREDHSPRGPRGVDDIFSDEDEDLGDGYDERPSRREARGGVTDEFADFIEEDVFD
DDEGLQDEEDREVARPGKRAVSGVGFPEAGLDEAEMEDYRNAFGDGTEYDWALDLQEQKD
EEEMGDEKPLELKDVFEPSQLAERLMTDEDNEIRFTDVPERFQLARKPFKQLELDEDEMA
NRMGVEALWVSKLLWPKKRLGQSCEQPFQKAVRKVLELMNIEDLEVPFIFNHRKDYLIHS
SSPQDQDDIDGNSGPQRLLTQGDLWEIFELDLKFRALSEKREALIKTYENLKSILDVQDT
VFETLLAKAESIEEVQDIQDYVHFTYSAQLKDVNTMEAESTGVQKRTRGGNTVFERIRAS
KVYNLVRAIGITPDDYAKNLQKEGHRLYPEDPQQMPEDLADTLVEPPEYNTTAVVLRSAK
AMFAEELVMSPRMRNIMRRTFYQAGLFDIYRTEKGLRKITEDHPYYEFKYLRNQEYSAMA
RRPELFLRMLKAEDEGMVEVKVRLQNYDRLRDDFRAMLFSDGTSELSTRWNEFRREVLDV
ALPKLERIIAKGVKETVKAECENALARQCKDRYAEKLDQAPYKPKGMQLGTIPRVLALSN
GNGIPGRDAVCYAWVDEEGRVLEQGKFNDLRPGNKEKYIPDAKDIEDLVEMVQRRKPDVI
GVSGFSVETRKLYKDLQQIVEDHDLRCADYEDEDGNEKTDRLEVVMVNDEIARLYHTSDR
SNLDHPGQPPLVKYCIALARFLQSPLKEYAALGKDIVSISFDPNQILLPQDKLMKYLEMA
MVDIVNLVGVEINDGLTDSYLANLLPYVCGLGPRKSQQLLKVINLNNGVVYTRDELVGDP
DKKILPAVGPKVWMNCASFLYIGYDPTEPESDYLDSTRVHPEDYDLGRKMAADALEMDEE
DIKAEQDENGPGAVVKRLIREDAQEKVNDLVLEEYAEQLEAQFHQRKRATLETIRAELQV
PYEELRNKYTYMTSDEIYTMLTGETRESLSEGHIVPVKIRRVFPDHIEARLDCGMEAVCN
EPEFPNNVGGERGVDPRQIFQANQTVQAKVTFLNRKALQCQVSFNEKQLKDGHHRHIDRP
RGEWAKEQEDADKDAEAKEKESKTGRAQRVIKHPLFRPFNAAQAEEYLGSQGRGDVVIRP
SSKGLDHLAVTWKVSDNVYQHIDVLELDKENEFSLGRTLKIGGKYTYSDLDELIVLHVKA
MAKKVDEMMTDEKYQQTSRAQTEQWLTTYTEANPKRSMYAFCINPKFPGYFHLCFKAGQQ
APLASWPVKVIPNAFELQKNHYPDMRALKNGFKLLFANNAARKR
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatcccctgcttgacgtcgccgccgagctaggcagcgagtccgacgatgccgac
tacgacgaggaacaggctcccaagggccagggaaagccctcgcgccgatctggggccgtc
gacgattccagcgaggaggaggacgaggatgacgatgaggaggctgccgccgccgttcgc
gagggattcatcgttgacgaagatgaagaggacgaagaggaacggcgcgcccgcagacgc
gaaaagaagaagaggcgacgggctgagcgtgaagaggaagaggccgctttggacgaggag
gacctcgatctcatcggagagacggtccccagggaacagacgacacaatccaagttcaag
cgcctaaagcgtggccacagggaggaccattcgcctcgaggaccccgcggtgtcgacgac
atcttctccgacgaagacgaggatctcggcgacggctatgatgagagaccctcccggcga
gaggcccgaggcggcgtcacggatgaattcgccgacttcatcgaagaggatgtcttcgac
gacgatgaaggcttgcaggatgaggaagaccgggaggtggcaagacctggaaagagagcc
gtcagtggcgttggcttcccagaggctggcttggatgaggccgagatggaggactaccgg
aacgctttcggcgatggtaccgaatacgattgggctctggacctccaggaacagaaggac
gaggaggagatgggagatgaaaaaccattggagctgaaggacgtcttcgagccttctcag
ttggccgagaggttgatgacggacgaagacaacgaaatccgcttcaccgacgtccctgag
cgattccaactcgcgaggaagcccttcaagcagctagagcttgacgaggacgagatggcg
aaccgcatgggtgtggaggctctctgggtatcgaagctcttgtggcctaagaagcgtctt
gggcaaagctgcgaacaacccttccagaaggccgtccgcaaagttttggagctcatgaac
atcgaggacctggaagttcctttcatcttcaaccatcgcaaagactatttgatccattcc
agctccccgcaggaccaggatgatatcgacggaaactctggcccccagcgactcttgacc
caaggcgacttgtgggaaatctttgagttggacctgaagttccgggctttgtcggagaag
cgtgaggcactcatcaagacttacgagaacctgaagagcattttggatgtccaggacact
gtcttcgaaacgctactcgccaaggccgagtctatcgaggaggttcaagatattcaagac
tatgtccacttcacgtactctgctcagcttaaggacgtaaacaccatggaagccgagtct
actggtgtccagaaacggacccgcggcggcaatactgtgttcgagaggatccgagcaagc
aaagtttacaacctggttcgtgccatcgggatcacgcctgatgattatgccaagaacttg
cagaaggaaggccaccgcctgtaccccgaggatccccagcagatgccagaggatttagcc
gacacacttgtggaacccccggaatacaacacaaccgcagtcgttctgcgctcagcgaaa
gccatgttcgccgaagagcttgtcatgagcccaaggatgaggaacatcatgagacgcact
ttctatcaggccggtcttttcgacatctatcgcaccgaaaaaggccttcgcaagatcacc
gaggaccacccgtactacgagttcaagtacttgcgcaaccaggagtattcggctatggcc
cggagacccgagttatttctgcggatgctcaaggctgaggatgagggtatggttgaagtc
aaggtccgcttgcagaactatgacaggctcagggatgacttccgagcaatgctattctcg
gacggaactagcgagctttcgacaagatggaacgagttccgcagagaggttcttgacgtg
gccttgcctaagcttgagagaatcattgccaagggagtcaaggagactgtgaaggctgag
tgtgagaacgctctggccaggcagtgcaaggacagatacgcggagaagttggaccaagca
ccttacaagccaaagggcatgcaacttggtactatcccgagagtcctcgctctttccaac
ggcaacggcatccccggacgcgatgccgtctgctacgcgtgggtcgatgaagaaggacgt
gttctggagcaaggcaaattcaacgaccttcgtcctgggaacaaggagaagtacataccc
gacgccaaagacatcgaagatctcgtcgagatggtccagaggcggaaaccagatgttatt
ggtgtgtcgggtttttcggtcgagacacgtaaactctacaaggacctccagcagattgtt
gaagatcatgatcttcgttgcgccgattacgaggatgaggatggcaacgagaagaccgac
aggctcgaagtcgtcatggtcaacgacgaaatcgcccggctgtaccacaccagtgacagg
tctaatctggaccatcctggtcaacctccgctggtgaaatactgcattgctctggctcgc
ttcttgcaaagccccttgaaggagtacgcagctcttggcaaagatatcgtctccatttct
ttcgacccgaaccagatccttctccctcaggacaaactgatgaagtacctcgagatggcc
atggtggacattgtgaatctcgttggtgtcgaaatcaacgatggtctcaccgactcctac
cttgctaacttgcttccttatgtctgtggtcttggtccaagaaagtctcaacagctcctc
aaggtcatcaatctgaacaacggggttgtgtacacaagggacgagctcgttggcgaccct
gacaagaagattcttcccgctgtcggtcccaaggtctggatgaactgtgccagtttcctc
tacatcggctacgaccccaccgagcctgagtccgactatcttgattcgactcgtgtccac
cccgaagattacgaccttggccgcaagatggctgctgatgcgctcgagatggatgaggag
gacatcaaagccgaacaggatgaaaatgggcccggtgctgttgtcaagaggctgattcgg
gaggatgctcaggagaaggtgaatgaccttgtcctggaagagtatgccgagcagcttgag
gcgcaattccaccaacggaagcgggccactctcgaaacgattcgtgctgagctgcaggtg
ccgtacgaggaactgcgcaacaagtacacttacatgacttcggatgagatctacaccatg
ctcactggcgaaactcgcgagtcactttcagaaggccacatcgttcccgtcaagattcgc
cgagtctttcccgatcatatcgaggcgcgcttggattgtggcatggaagctgtatgcaac
gagcccgagttccctaacaatgttggtggcgagcgtggtgtagacccgcggcaaatcttc
caggcaaaccaaacggtgcaggcaaaggtcacattcctcaaccgtaaagctttgcaatgc
caggtctctttcaacgagaagcagctaaaggacggccatcaccggcacatcgatcggcca
agaggtgaatgggccaaagagcaggaagatgctgacaaggatgcggaggctaaggagaag
gaaagcaagactggtcgcgctcagcgtgtcatcaagcacccgctcttccgtccgttcaac
gccgcccaggcagaggagtatctgggctcccaaggtcgtggggatgtcgtcatccggcct
tcttccaagggtctggaccatcttgctgttacctggaaggtttcagacaacgtctaccag
cacatcgatgtgctggagctagataaggagaacgagttcagtctgggtcgcaccctcaag
attggcggaaagtacacgtacagtgatctggacgaactgatcgtgctgcacgtcaaagct
atggcgaagaaggttgacgagatgatgaccgatgagaagtaccagcagaccagcagggcg
caaactgagcaatggcttactacctataccgaggccaaccccaagcgcagcatgtatgcc
ttctgcatcaaccctaaattcccaggctacttccacctgtgcttcaaggcaggccagcaa
gccccgcttgcctcttggcctgtaaaagtcatcccgaacgcctttgagctccagaagaac
cactacccagacatgcgagcactgaagaacgggttcaaacttctctttgcgaacaacgct
gcccggaagcggtaa
DBGET
integrated database retrieval system
