Neofusicoccum parvum: UCRNP2_7563
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Entry
UCRNP2_7563 CDS
T03126
Name
(GenBank) putative dna excision repair protein ercc-8 protein
KO
K10570
DNA excision repair protein ERCC-8
Organism
npa
Neofusicoccum parvum
Pathway
npa03420
Nucleotide excision repair
npa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
UCRNP2_7563
09124 Replication and repair
03420 Nucleotide excision repair
UCRNP2_7563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npa04121
]
UCRNP2_7563
03400 DNA repair and recombination proteins [BR:
npa03400
]
UCRNP2_7563
Ubiquitin system [BR:
npa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
UCRNP2_7563
DNA repair and recombination proteins [BR:
npa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
UCRNP2_7563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_NUP159_NUP214
Beta-prop_Nup120_160
Beta-prop_RIG_1st
WD_LRWD1
ColA_N
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-ProteinID:
EOD45708
UniProt:
R1ED61
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MNALLLNRALGAISPPSFQRHETTRLLHALHASPLRFDGSVQPEHDALPEDIRAHAAGVQ
SMAIDKFEGRYLLSGGADSSVCMWDLEAREGRSATTLHPLGALQKTSKAHSFGITHVSFY
PFDSLAFLSSSYDHTLKVYSSETLDVSASFDLNHVIYSHAMSPIASHLLVACATQQPTVR
LVDLRSGAATHSLAGHGGAVLSTAWSPVAEHVVASGGTDGTVRFWDIRRSAGCLGVLDME
DSLGVVGFDGSGGGARNRQQGRAHAAAVNGVVWTEDGRHLVSTGHDERVRVWDTATGANT
LASFGPTVKNAHLSALLPLVSPSALTAPGKECLFFPSEREILMYELLEGRLFKRLKTPHR
STGTVGAAGTQRQLKNRTTALAWRAHDVELYSAHADGTIRAWTPRTEEDLMVEEEEREEA
EHEEQTRKRKREALEEIYRDFTKKAMTFT
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctctcctcctcaaccgcgcgctgggcgctatttcgcctccgtcgttccagcgc
catgagacgacgcgcttgctgcacgcgttgcacgcctccccgctccgattcgatggctca
gtccagccagagcatgacgcgctccccgaggacatcagggcccatgccgccggcgtgcag
tccatggccatagacaagtttgagggccgctatctcctctccggtggagcagactcgtct
gtctgcatgtgggatctcgaggctcgggaaggccgctcggcgaccactctccacccgctt
ggagccttgcagaaaacatccaaggcccacagcttcggcataacccacgtctcgttctac
cctttcgactcgctggccttcctctcctcctcgtacgaccacaccttgaaggtatactcc
tccgagaccctcgacgtctccgcgtccttcgacctgaaccatgtcatctactcccacgcc
atgtcccccatcgcgtcgcacctcctggtggcctgcgcgacccagcagcccaccgtccgc
ctcgtcgacctccgctccggcgccgccacgcactcgctcgccggtcacggcggcgccgtc
ctctccaccgcctggagccccgtcgccgagcacgtcgtcgccagcggcggcaccgacggc
acagtgcgcttctgggacatccgacgcagcgccgggtgcctgggcgtgctggacatggag
gactctctcggcgtcgtcggctttgacggcagcggcggcggcgcgcgcaaccggcagcag
gggcgcgcgcacgctgctgctgtcaacggcgtggtgtggaccgaggacggccggcacctg
gtcagcaccgggcacgacgagcgcgtgcgcgtctgggacacggcgactggcgccaacacg
ctcgccagctttgggccgacggtcaagaacgcgcacctgtcggccctgctgccgctggtg
tcgccgagcgcgctgacggcgcccggcaaggagtgcctgttcttccccagcgagcgcgag
atcctgatgtacgagctgctcgagggccgcctgttcaagcggctcaagacgccccaccga
tcgacaggcactgtgggcgcggcggggactcagcggcagctgaagaaccgcaccacggcg
ctggcgtggcgcgcccatgacgtcgagctgtactccgcgcatgcggacgggactatcaga
gcgtggacgccgcggacggaagaggacctgatggtcgaggaggaggagcgggaggaggcg
gagcatgaggagcagacgaggaagcggaagcgcgaggcgctggaggagatttacagggat
tttacgaagaaggcgatgacatttacctaa
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