Neofusicoccum parvum: UCRNP2_7711
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Entry
UCRNP2_7711 CDS
T03126
Name
(GenBank) putative nucleoporin protein
KO
K14311
nuclear pore complex protein Nup188
Organism
npa
Neofusicoccum parvum
Pathway
npa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
UCRNP2_7711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_7711
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
UCRNP2_7711
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_C
Nup188_N-subdom_III
Nup188_SH3-like
Rsa3
Motif
Other DBs
NCBI-ProteinID:
EOD45578
LinkDB
All DBs
Position
Unknown
AA seq
1500 aa
AA seq
DB search
MAATPGDSVLFPPLDKCLTGEQQLLSWKDAFVALRDSKNGREGDALRAFLSDDANVAVLS
KPFQPFQPPNTQSKSAFETKTAAINVTPSDNGQYNIDDIKEDTKWLSAEVNIEEVSALRI
VVLEWHARPATQLLAGFTEEETLSVQDAAGGANLGSSTFLPKSSILAATASGMGQNFAAF
HSKEKRQIRILETYLSERIHILKISDLLVRLGAAAAQANGSASVAALGADAQPAWVGELG
KRVFSSQKTGFIKDGTKALQKRFQGIAAGSGWYKDVPEGNEEAEELWGQSQLAEAICILQ
LIFTHVDTTPDLLPSDVVVDWFEAMAGCSFCKDIQLVIRGNSETLSHERETQITHGPPEV
DLTVVEKLNDMIKGVSLNEEDEEDNATTLTKASIIGARVYELVPEIALNLTITFSDGNGN
DGYAADLGHHLEARMRLQLLWLIHEEGELVTTKWLQDKGQFTHVIPYGFEGYVPTREDEV
PSVQLKEDMSLFWDRKASKRPIADEETEGNELVPIDEMPADEVHFIPVGTEGIALNPDSK
PLVIAWAHKHSALRYLAAYLSTFLVGNETVETATQQPISIDTATEYIGLLAMLVNAAGKA
ASARDADPRKDAQWILEDASDGLARNQDIISLVFDIFEQELERLREKPNNDGSLELLVNC
LYFIHSLVAVFPNRVWPFFTRSRLLDLEGTGGSLVEIVSGTEMVAGRYDFLLGCAHLFKA
LANDSIKHVVSRKQSGKEVVRFSSIPTAGGGSPDKITSKVLLSFTKTFTGVYESCPSWRF
GAIDQKLELNRLTMETFSDILRTVHGYDDEATSAADKLSSVLAPAADYLLEAFCSDSTND
ISTHAILNIFFTGTKPLPISTAVRIEKLWRSQTKAAISFAITILQAGVLDFLVSIMDFIR
ALQPVSAGASPETVETQSIKIQMASLVSDIGAMCLHYARQLGDMRPAQHVIAKLDFLQKH
GVDPPGYNQSLHTNLKKNVESKFPGVKLSNFKRSLLTRSEFGRDYFYDLQYASEVLGFDP
TWVGLRKDSGFADEFQRANVNLSLVEAQITLLKSWKLLAIELASIADKDHRLEEILSNVV
EQCLRANQRSNGSQALFERLVHVRADFAFVLMQKLIAADCNSDHIKALFSVCWDTIRMSG
VDFEIAFMGENAYYYRTLLRILFLTLQPHIKAAKQKEEPGIQKNIPQIASQLMEILEKVV
ATGLRSLANQVHEDQESCSPSDFVLISALLSAILRIPGMNVLAGEINLLFSNANTIRHAT
SLFTWADQLAVDGDPIYGELSILFLLELSSILPMAETLAVEGVLSRLSTANLVNYYRKPR
GMGPFDNPPRLFSIWTRGILPLCLNLLDAVGAPVAAEVSAFLNQFPEQLARASAALNPRN
APTAKDPNAGAVSLGAASEAHSLALVAVVLDRFRADSAAAAGVNPQDILPLNWDRAGVKE
DVEGWLQGRRGLRDRLVPTNERELELVKQRAAGGGAESRLEERVVVELTGALECLNDGGA
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaacacctggcgactccgtccttttcccgccgctggacaaatgcctgaccggg
gagcagcagctgctctcgtggaaggacgccttcgttgccctacgcgactctaagaatggc
cgcgagggagatgccctgcgcgccttcctctccgacgacgccaatgtcgccgttctcagc
aaaccgttccagcctttccagccgccaaacacccagtccaagtcggccttcgagaccaag
accgccgccatcaacgtcacgccctcggacaatggccagtacaacatcgatgatatcaag
gaggataccaagtggctgtcggcagaggtaaacattgaggaggtttcggcgctgaggata
gtggtgctggaatggcacgcgcggcccgcgacccagctgctagctggcttcaccgaggag
gagacactcagcgtccaggatgctgccggcggtgcgaatctcggctcatctaccttcctg
cccaagtcgtccatccttgccgcaacagccagcggaatgggccagaatttcgccgctttc
cattcgaaggagaaaaggcagatacgaatactggagacctacctgtcggagaggatacac
atcttgaagatcagcgacctgctggtccgcctcggagcggcagctgcgcaggcgaatggc
tcggcgagtgtcgccgccctcggagcagatgctcaacccgcgtgggttggagagcttgga
aagcgggtgttctcctcgcagaagaccggattcatcaaggatggcaccaaggccttgcag
aagcgtttccagggtatagcggcaggcagcggctggtacaaggatgttcccgaaggaaac
gaggaggccgaagaactgtggggacaatcgcagctcgccgaagctatctgcatcctccag
ctcattttcacacacgtggatactaccccagaccttttgccatcggacgttgttgtggac
tggttcgaggctatggctggctgtagcttctgcaaggatatccagctggtgataagaggc
aacagtgaaactctgagccacgaacgagagacacagatcacccatgggccccccgaagtc
gacttgacggtcgtagagaagctcaatgacatgatcaagggagtcagcctcaatgaagag
gacgaggaagataatgccacaaccctcaccaaagcctccatcatcggagccagggtttac
gagctcgtaccggaaattgccctcaatctgacgattactttcagcgatgggaatggtaat
gatggttacgctgcggacctcggtcatcatttggaagctcgcatgcgtctccagctcctg
tggctcatacatgaggaaggagagcttgtcaccaccaagtggcttcaggacaaggggcag
ttcacacatgtcatcccgtacggcttcgaaggctacgtgcccacgcgcgaagatgaagta
ccttctgttcaactgaaggaagacatgagtcttttctgggaccgcaaagcttctaagcgt
cctatcgcggacgaggaaaccgagggaaatgagcttgtgcctattgacgaaatgccggcc
gacgaagttcacttcatacccgttgggacagaagggattgctctcaaccccgattcaaag
cctcttgtcatcgcatgggcgcacaaacactcggctctacgctatctcgccgcatacttg
tccaccttcctagtgggtaatgagaccgtcgagacggcaacacaacaaccgatcagcatc
gacacggcaactgagtacattggtctgcttgcgatgctcgtcaatgctgccggaaaggca
gcgagtgccagggacgctgatccgcggaaggacgcccaatggattctggaagatgcgagt
gacgggctcgcccgcaaccaagacatcatcagtctggtatttgatattttcgagcaagaa
ctcgaaagattacgagagaagcccaacaacgacggatccctggagctcttggtcaattgc
ctctacttcatccattcactcgtagcagtcttccccaaccgtgtctggccattcttcaca
agaagtaggttgctcgacttggagggcaccggcggcagccttgtggagattgtctccgga
actgaaatggtggccggccgctacgatttcctcttgggctgtgcacacctgttcaaagct
ttggccaacgactccattaagcatgtcgtgtccaggaaacagagcgggaaggaggtcgta
agattctcctctattcccactgcaggaggcgggtcacccgataagattaccagcaaggtt
cttctgagcttcaccaagacattcactggggtttacgaaagttgtcccagctggcgattc
ggcgccatcgaccaaaagcttgagctcaaccgtttgacaatggagactttctctgatatc
ttgcgcacggttcatggctacgatgatgaagcgaccagtgctgccgacaagctcagtagt
gtgctcgctcccgcagcagactatctcttggaggcattctgctcagattccaccaatgac
atctccacccacgcaatcctcaacatcttcttcaccggaaccaaacctctccccatctct
accgccgtgcgcattgaaaaactgtggagatcacaaacaaaggctgccatctccttcgcc
ataactattcttcaggccggcgtgctggacttcctcgtcagcatcatggatttcatccgg
gctttgcaacccgtatcagccggcgcatcaccagagacggtggagacccagtccatcaag
atccaaatggcttccttggtctctgacatcggtgctatgtgtcttcactacgcgcggcaa
cttggcgatatgcgtcctgcacaacatgtcattgccaagctggacttcctccaaaaacat
ggtgttgatcctccaggatacaaccagtcactacacaccaatctgaaaaagaatgtcgag
agcaagttcccaggtgtcaagctctcgaacttcaagaggtcacttctgacccggtccgag
tttggccgcgattacttttacgatctgcagtatgcatctgaggtccttggtttcgacccg
acgtgggtcggtttgaggaaggacagtggtttcgcggacgagttccagagggccaacgtc
aacctgtccctcgttgaggctcagatcacccttctcaagagctggaaactgctcgcgatc
gagcttgcctccattgccgataaggaccaccgtctcgaggagatcctgtcaaacgttgta
gagcagtgcctgcgagctaaccagagatcaaacggctcgcaagctctctttgaacggcta
gtgcacgtgcgggcggactttgcatttgtactgatgcagaagcttatagcagccgattgc
aacagcgaccacatcaaagcgttgttcagcgtgtgttgggataccatccgcatgtcaggc
gtcgactttgaaatcgccttcatgggagaaaacgcgtactactaccggacgctcctgaga
atactgttcctgacgcttcagccccatatcaaagcggctaagcagaaggaggagcctggc
attcagaaaaacatcccgcagattgcatcccagctcatggaaattctggagaaggttgtg
gctaccggcctgcgctcactagcgaaccaagtgcacgaggatcaggagagctgctcgccc
tcagactttgttcttatcagtgctctgttgtccgccatcctgcgcatccctggaatgaac
gttctggcaggcgaaatcaacctactcttctcgaacgccaacacaatccgccacgccacc
agcctattcacatgggcagaccagctcgctgtcgacggtgaccctatctatggcgagctg
agcatcctcttccttctcgagctctctagcatcctaccgatggccgaaaccttagcagtc
gaaggcgtcctctctcgcctaagcaccgcaaacctggtcaactactaccgcaaaccgcgc
ggcatgggccccttcgacaaccctccgcgcctcttctctatctggacccgtggcatcctg
cccctctgcctcaacctcctcgacgccgtcggcgcccccgtggccgccgaggtgtcggcc
tttctcaaccaattcccggagcagctggcgcgcgcctcggcggcgctcaacccgcgcaac
gcgccgacggcgaaggacccgaacgcgggcgcggtgtcgctgggcgcggcgtccgaggcg
cacagcctcgcgctcgtcgccgtcgtgctcgaccgcttccgcgccgactcggccgccgcg
gccggcgtcaacccgcaggacatcctgccgctgaactgggaccgtgcgggcgtgaaggag
gacgtcgagggctggctgcagggacgtcgcgggctgcgcgatcgcctcgtgccgacgaac
gagcgggagctcgagctcgtgaagcagagggcggcgggcggcggggcggagagcaggttg
gaggagagggtggtggtggagttgacgggagcgttggagtgcttaaatgatgggggtgcg
tag
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integrated database retrieval system
