Neofusicoccum parvum: UCRNP2_7772
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Entry
UCRNP2_7772 CDS
T03126
Name
(GenBank) putative pre-mrna-processing atp-dependent rna helicase prp5 protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
npa
Neofusicoccum parvum
Pathway
npa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRNP2_7772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npa03041
]
UCRNP2_7772
Enzymes [BR:
npa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UCRNP2_7772
Spliceosome [BR:
npa03041
]
Complex A
U2 snRNP components
U2 related factors
UCRNP2_7772
Complex B
UCRNP2_7772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
Motif
Other DBs
NCBI-ProteinID:
EOD45510
UniProt:
R1G292
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MRPDRDLQRRDRDRDREYYDPPPRRDRSRDRRYGGRDDRSYRPHRERSRDRKRSRDRSPP
RDHRRRDDSRDRVKRRRDDSADSRRNKRRDASPARSKESTKPSDVPPSSATNDAQNLDAE
SAEARKQAERLKRTQLWKAKIEAEKKEKELKGGTREILEAMDKKSMASPATVASPATLAS
PQSPAPAPVSGTESPKQQYTGKFDPKAIAKKATANTNGANALGGDVAIPSMAVPSTKAAP
TNNNNAQTNPGSLLKAKGNVSGFGFGRVGPRAADTEKPGAKRALDLEDEQSTRKRLEKLP
TPDLDDGADQNEASIEQDDADDSGDDDAGMADGGTEEEQAAAARAAAEKREERLQVARAP
DVDTEMTDAPQPNQDSAVALHDNTSVPQDDAEEIDPLDAFMTGLQTMEAPKRGPKTLSKN
GQKEPVAFYSDEDDIKEAALDSDPEDVLRATKKKKAKAQISEVDHKKMNYQDVRFNFYTE
PSELSQMSDDALSSLRFELDGMKVQGRNVPKPVMVFAQCGLGLKTLDILRNLQFEKPTAI
QAQAIPAIMSGRDIVAVARTGSGKTLAFLLPMFRHILDQDSLKTLDGPIAVIMAPTLVCG
GGAPIKDQIADLKKGAEIIIATPGRLIELLSANGGRVTNLARVTYVVLDEADRMFDLGFK
PQIERILQNVRPKRQTMLFSATFPALLENIAKDKLNDPVQITVGGRSSVPPEVTQEIIVV
EEEDKFNRLLGILGDFYETEEDARTLIFVKTQQTAEKLLDLLMKKYYSCDSIHGAKDQVD
RDSALSDFKRGAIPILIATSVAARGLDVKQLKLVINYDAPDHLEDYVHRCGRTGRAGNKG
TAITFFRPRQRQLAKEISKAFELANLPVPENLQQIADQAKGRSNTTRKGFMGKSLEHYDQ
RNEAAKKAMKNKYRVDGDDDDDDDEEEEQEVAAPIVQAKAAVKTEPVTTPTAPKPAANRK
GFDFPETIQVFKTEQPEATGSKSKSNDPLERVRAAASKIDGRLTQRNQLRPGQPIDNKGP
DAGAYHATLEINDYPQKARWAVTNRTNVAKILEATGTSITTKGNFYAPGAQPPPDGAPKL
YILVEGDTEIVVQTAMRELMRLLKEGTVAAQETETRGPTGKYSVV
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctgaccgcgacctgcagaggcgcgaccgtgatcgcgaccgcgagtactacgac
cctcctccccgtcgagaccgctcccgagaccgtcgctatggcggccgtgacgaccgcagc
taccgcccccaccgcgagcgctcccgtgatcggaagcgatcgcgcgaccgttcgccgcct
cgcgaccatcgccgccgcgacgactcccgcgatcgcgtgaagaggcgccgagacgactct
gcagactcgaggcgcaataaaaggcgtgatgctagcccagctcggtctaaggaatccaca
aagccttcagatgttcccccttcgtcggcgaccaacgatgcccagaacctggatgctgaa
agtgccgaagcccgtaagcaggctgagcgactcaagaggactcagctctggaaggcaaag
atcgaggcggagaaaaaggagaaggagttgaagggcggcactcgtgagatcctcgaggct
atggacaagaagagcatggcatcacccgctacggttgcatcacccgccacgcttgcatca
cctcagtctcccgcccctgcccctgttagcggcaccgaatcccccaagcagcagtacacc
gggaagtttgatccgaaggcaatagcgaagaaggccaccgccaacactaacggtgcaaat
gctcttggaggagacgtcgccattccatctatggccgtcccatctacgaaggccgctcct
acgaacaataacaacgcgcagacgaaccccggctctcttttgaaggctaagggtaacgtt
agtggtttcggattcggacgggttggaccacgtgcagcggacacagagaagcctggcgcg
aagagagctttggatctagaggacgaacagtcgacgcgtaagaggcttgagaagcttcca
accccggaccttgatgatggcgcagaccagaacgaagctagcatcgagcaagacgatgcc
gacgactccggcgatgatgatgcaggcatggcagatggtggcacagaagaggaacaagcg
gccgccgctcgagctgctgcagaaaagcgtgaagagcgcttgcaggtggccagagccccg
gatgtggataccgaaatgactgatgcacctcagccaaatcaagacagcgccgttgcgctc
cacgacaatacgtctgtgccgcaggatgatgcagaggagattgatccgttggatgccttc
atgactggtctgcaaaccatggaagccccgaagaggggcccgaagactttgtccaaaaac
ggccagaaggagcctgtggccttttacagtgacgaagacgacatcaaagaagctgcgctt
gactctgacccagaggatgtactgagagcaaccaaaaagaagaaggccaaggcgcaaatc
agcgaagtggatcacaagaagatgaattaccaagacgtcaggttcaacttttatactgag
ccttccgaactatcacagatgtccgatgacgcccttagtagcctgcgctttgagctggat
ggcatgaaagtccagggccgtaacgttcccaagcccgtgatggtcttcgctcagtgcggt
ctcggtctcaagacgttggacattttgaggaacctccagtttgagaagcctactgccatc
caggcacaagctattcccgcaatcatgtccggcagagacatcgttgctgttgccagaacc
ggctctggcaaaacgcttgccttcctcctgcctatgttccgccacatcttggaccaagat
tcgctcaagactctcgacggccctattgctgtgatcatggctcctactctcgtttgtggt
ggaggtgcaccaatcaaggaccagatcgctgacctgaagaagggagccgagatcattatc
gccacgccaggccgtctgattgagctcctaagcgccaacggtggtcgtgttacgaacttg
gcccgcgtcacttatgtcgttctggatgaagcagaccgaatgttcgacttgggtttcaag
ccccagatcgagcgaatcctgcagaatgtgcgtccgaagcggcagacgatgcttttcagt
gccaccttcccagcattactggagaatatagcgaaggataagttgaacgaccctgtccag
atcaccgtcggtggaaggtccagtgttccgcctgaggttactcaagagattattgtggtt
gaagaagaggacaagttcaaccgcttgctcggcatccttggcgatttctatgagactgaa
gaagatgcacgcactttgatcttcgtgaagacccaacagacagccgagaaacttctcgac
ctgctcatgaagaagtactacagctgcgactccattcacggcgccaaagaccaagttgat
cgcgattcggccctgtcggatttcaagagaggcgcaattcccattctcatagccaccagc
gttgctgcccgcggacttgatgtcaagcagcttaaacttgtcatcaactatgacgccccc
gaccatttggaggattacgttcaccgctgcggtcggacaggtcgcgcaggaaacaaaggc
acagctatcaccttctttaggccgcgccagcgtcaacttgccaaggagatctccaaggcc
ttcgaattagccaatctcccggttcctgagaacctccagcaaatcgcggatcaggccaag
ggtaggtcaaacacgaccaggaagggcttcatgggcaagtctcttgagcattatgaccag
cgcaacgaagcagcaaagaaagccatgaagaacaagtacagagtggacggcgatgatgac
gacgatgatgacgaggaggaggaacaagaggttgctgcacccattgttcaggcaaaggct
gctgtgaaaacggagcctgttacgactccaacggcacccaagccagctgcaaaccgcaag
ggcttcgacttccccgaaaccattcaagtcttcaagacagagcagccggaggcgactggg
tcgaagtcaaagtccaacgaccctctcgagcgtgttcgtgcagcagccagcaagatcgac
ggccgactcacccagcgcaatcagctccgccccggccagcccatcgacaacaagggtccc
gatgctggcgcttaccatgccaccctggagatcaacgattacccgcagaaagcacgctgg
gctgtcacgaaccgcaccaatgtggcaaagatcctggaagctaccggcacgtcgatcact
acgaagggcaatttctacgctcctggcgcgcagcctccacccgatggagcaccgaaactt
tacatcttggtggagggcgacacagagattgttgtccagacggcaatgagggagctaatg
cgcctactcaaggagggtactgttgctgctcaagagaccgagacgcgtggcccaactgga
aagtacagcgttgtttag
DBGET
integrated database retrieval system
