Neofusicoccum parvum: UCRNP2_8087
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Entry
UCRNP2_8087 CDS
T03126
Name
(GenBank) putative ribosome biogenesis protein
KO
K14848
ribosome assembly protein RRB1
Organism
npa
Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npa03009
]
UCRNP2_8087
Ribosome biogenesis [BR:
npa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
UCRNP2_8087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
CAF1C_H4-bd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
EIF3I
WD40_RFWD3
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-ProteinID:
EOD45202
UniProt:
R1ECH7
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MSKRPADPQDDERDALKSGERPLPAAVPDEAGEFEDEFEDEFESEDEIIEAGVDGRPDEE
REAEEREDAMEVDQGTFIPGRHKLSAGETLSPDLSTYEMLHSLEAPWPCLSMDIVRDQLG
DDRKSYPATVYAVAGTQAAAGRDKENQLLVMKMSSLSRMDREQEESDDESDDDENADPIL
ETKSIPLTSTTNRIRAHQSPQVTSAQPPTTLTATMTESGQVLIHDITPHLTAFDTPGATL
TPQQSKPVCTVRAHGKNEGYAVDWSPLVPEGKVLTGDVTGKIFATTRTQGGGFVTDTTPY
TGHKQTVEELQWSPSEKNVFASAGNDGTVRVWDVRSKSRKPVITVQASKTDVNVLSWSHQ
TAHLLASGADDGQWAVWDLRQWKPSANGAPIKPSPVASFDFHKEQITCVKWHPTDDSIVM
VAAGDNTLTLWDLAVELDDEESRDTAGVQDVPPQLLFVHYMDQVKEGHWHPQIPGCVMAT
GGSGFGVFKTISV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgtcccgccgacccgcaggacgacgagcgcgacgctctcaagtcgggcgag
cgcccgctgcccgccgccgtgcccgacgaggccggcgagttcgaggacgagttcgaggac
gagttcgagagcgaggacgagattatcgaggctggcgtcgacggccgccccgacgaggag
cgcgaggctgaggagcgtgaggatgcaatggaggtggatcagggcaccttcatccccggc
cgccacaagctttccgccggtgaaactctctcgcccgacttgtcgacctacgagatgcta
cactccctcgaggccccgtggccgtgtctttccatggacatcgtccgcgaccagctcggc
gacgatcgcaagtcgtacccggccaccgtctatgccgttgccggcacccaggccgctgcg
gggcgcgacaaggagaaccagctgttggtcatgaagatgagcagtctgagccgcatggac
cgcgagcaggaggagtcggacgacgagagcgacgacgacgagaacgccgaccccatcctc
gaaacgaagtcgatccctcttacgtcaacaaccaaccggatacgcgcgcatcagtcccca
caggtcacctctgctcagcctccaacaacgctgaccgcgaccatgactgagtccggccaa
gtcctgatccacgacatcacgccgcacctcacagccttcgacacccccggcgccacattg
accccacagcagtcgaaaccggtgtgcactgtccgcgcccacggcaagaatgagggctat
gctgttgactggtctccgctcgtgcccgagggcaaggtcctgactggcgacgtaaccggc
aagatctttgccaccaccaggacacagggcggcggcttcgtcaccgacaccacaccttac
actggccacaagcagacagtcgaggagctgcagtggtcgccatcggagaagaacgttttc
gcttccgccggtaacgacggcacggtccgtgtctgggatgtccgctctaagtcccggaag
ccggtcattaccgtccaggctagcaagacggatgtcaacgtgctctcgtggtcgcatcaa
accgcacaccttctagcatctggcgcggatgacgggcagtgggctgtgtgggacttgcgg
cagtggaagcctagcgccaacggcgcgcccatcaaacctagccctgttgcctcgttcgat
ttccacaaggagcagattacctgtgttaagtggcacccgaccgacgacagtattgtcatg
gtcgctgcaggcgacaacaccctcacgctgtgggatttggccgtcgagttggacgacgag
gagagcagagacacggctggcgtgcaggacgtgccaccgcagctactgttcgttcactac
atggaccaagtcaaggagggccattggcacccgcagattccgggttgtgtcatggccacg
ggaggaagtggatttggagtgttcaagactatcagcgtttag
DBGET
integrated database retrieval system
