Neofusicoccum parvum: UCRNP2_8118
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Entry
UCRNP2_8118 CDS
T03126
Name
(GenBank) putative ubiquitin ligase subunit protein
KO
K10609
cullin 4
Organism
npa
Neofusicoccum parvum
Pathway
npa03420
Nucleotide excision repair
npa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
UCRNP2_8118
09124 Replication and repair
03420 Nucleotide excision repair
UCRNP2_8118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npa04121
]
UCRNP2_8118
03400 DNA repair and recombination proteins [BR:
npa03400
]
UCRNP2_8118
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npa04147
]
UCRNP2_8118
Ubiquitin system [BR:
npa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
UCRNP2_8118
DNA repair and recombination proteins [BR:
npa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
UCRNP2_8118
TCR (transcription coupled repair) factors
Cul4-CSA complex
UCRNP2_8118
Exosome [BR:
npa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
UCRNP2_8118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
HbrB
Chalcone_2
Motif
Other DBs
NCBI-ProteinID:
EOD45171
UniProt:
R1GAE7
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MQHTQNHRAAKEDDKTDGHRKRKLQHVRPGNGNPSDQRADGSSSPAAKQQTIHELFQQKP
APARAANLSPKSSKRVKPNPAAGSDNPSSPPRSVDSPRSTSSSAALPPEKMYSFPSKKQN
GGSAVIDLTKTPSPSPASPARNAVANGAARSSSSHRPNFNPNTGAKQLVVKNLRKTPRTD
PKEYFNQVWGWLDDALAKIFRGADIDFSLETLYRGVENVCRQGHAAELAAKLHARCSRFV
ETGLKAQLLEKAGKTDVDLLRAVLAAWRTWTANQKPIRWIFCYLDRSYLLQQGRTLQDQA
FTLFRTIICEDAALKPKIVAGACDLVQADRSGEEFDKDTFRDVISMCHDLTIYTSFFEPK
LLELSQQFVASWAEQASQEKGLADYVRSAVQLMEREMQRCELFNLDATTRRDLLTLLEDH
LVQRQEARLLNQDEVADLLDENAVHDLEQLYKLLERRRLGAKLRSAFEKWIDLTGTAIVF
DEKDQDNMVVRLLTLKKQLDAIWRVSFHRNTDLGHALRESFETFINKSKKTSATWNTDNS
KPGEMIAKYVDMLLRGGAKVIPAQLSSVKSGEAERDENDDLTFDEDTEINNQLDQVLDLF
RFVHGKAVFEAFYKKDLARRLLMGRSASADAERSMLARLKTECGAGFTQNLEQMFKDIEL
AREEMTSYKSLLEERGEKAPVDLSVNILSASAWPTYPDIPVIIPAEIQQSLDKFTVHYKS
KHSGRKLDWKHALAHCQIKATFPKGNKELVVSSFQAIVLLLFNSIKTGEHLTYEFLKAET
GLPEPELKRTLQSLACAKLRPLTKHPKGREINPTDTFTYNSAFHHEKYRLKVNQVQLKET
KEENKETHERVAADRNFETQAAIVRIMKSRKKIGHAELVAEVINATKKRGVLSVQDIKKN
IDRLVDKDYMEREENNEYSYIA
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacacgcagaaccacagggccgccaaagaggacgacaagaccgacggccaccgc
aagcgcaagctccagcacgtccgcccgggcaacggcaatccgtccgaccaacgcgccgac
ggcagctccagccccgccgccaagcagcagaccatccacgagctgttccagcagaagccg
gcgccggcaagagcagccaacctgtcgcccaagagcagcaagcgcgtcaagcccaatccc
gccgccggctccgacaatccctcgtcgccaccccgctccgtcgactcgccgcgctcgacc
agctcgtcggccgccctgccgcccgagaagatgtacagcttcccgagcaagaagcagaac
ggcggcagcgccgtcatcgacctgaccaagacgcccagcccgtcgccggcgtcgcccgcc
cgcaatgccgtcgccaacggcgccgcgcgctcctcgtcgtcgcaccgccccaacttcaac
cccaacacgggcgcgaagcagctggtcgtcaagaacctacgcaagacgccgcgcaccgac
cccaaggaatacttcaaccaggtgtggggctggctggacgacgcgctggccaagatcttc
cgcggcgccgacatcgacttctcgctcgagacgctgtatcgcggcgtcgagaacgtgtgt
cgccagggccacgccgcggagctggccgcgaagctgcacgcccgctgctcgcggttcgtg
gagacggggctgaaggcgcagctgctggagaaggcggggaagacggatgtggatctgctg
agggcggtgctcgcggcgtggcggacgtggacggcgaatcagaaaccaattaggtggatc
ttctgctatctcgatcgctcgtacttgctgcagcagggccgaacactgcaggaccaagct
ttcacgctgttccgcaccataatctgcgaggatgcggcattgaagccaaagattgtggcg
ggagcatgtgatctggtccaggcggacaggtcgggggaggagttcgacaaagacaccttc
cgcgacgtgattagcatgtgccacgacctcacgatctacacgagtttcttcgagccgaag
ctgctggagctatcgcagcaattcgttgcgagctgggccgaacaggccagccaggagaag
gggcttgcggactacgtgcggagcgccgtgcagctcatggagagggagatgcagcgttgc
gagctgttcaacctcgacgcaacgacacggcgtgatctgcttactctactggaagaccat
ctcgtccagcggcaggaggccaggcttctcaaccaagatgaagtggcagacctgctagat
gagaacgctgttcatgatcttgaacagttgtacaagcttctcgagcggagacgattgggc
gccaagctgcggtcagcattcgaaaagtggatcgatctcactggtaccgctatcgtgttc
gacgagaaggaccaagataatatggtcgtaaggctcctcacgttgaagaagcagcttgac
gccatctggcgggtatcgttccaccgcaacacggacttaggccatgctttacgcgagtcc
tttgagacattcatcaacaagtcgaagaagacgagcgcaacctggaataccgacaactct
aagcctggagaaatgattgcgaagtacgtcgatatgcttctgcgtggcggtgcgaaggtc
atcccagcgcagctctcgtcagtgaaatccggcgaggcagaacgtgacgagaatgacgat
ctcacgttcgacgaagacactgagatcaacaaccagctagatcaagttctggacctgttc
cgtttcgtgcatggaaaggcggtgtttgaggctttctacaagaaggatttggcacgtcgt
ctgctcatggggcgcagtgccagtgcggatgcggaacggagcatgttggcaaggctcaaa
accgagtgtggtgctggtttcacgcagaatctggagcagatgttcaaggacatcgagctg
gcgcgtgaggagatgactagttacaagtcacttcttgaagagcgtggggagaaggctccg
gtcgacttatcagtcaacatcctctccgcttccgcgtggccgacgtaccccgacattccc
gtcatcatcccggcagagatccagcaaagcctagataagttcacggtgcactacaagagc
aagcacagcggacgcaagttggactggaagcacgcgctcgcgcattgtcagatcaaagcg
actttccccaagggcaacaaggagcttgtcgtcagctctttccaggccattgttctactt
ctcttcaacagcatcaagactggcgagcatctgacgtacgagtttttgaaggcagagacc
ggcctccctgaaccagagcttaagcgcaccctccagtcccttgcctgcgccaaactccgc
cccctcaccaagcaccccaagggccgcgagatcaacccgacagacacgttcacgtataac
tcggccttccaccacgagaagtacaggctcaaggtcaaccaggtgcagctcaaggagacg
aaggaggagaacaaggagacgcatgaacgcgtggccgcggacaggaattttgagacgcag
gcggcgattgtgcgaatcatgaagagcaggaagaagattggccatgcggagctggtggcc
gaggtgattaatgcgaccaagaagcggggtgttctgagcgtgcaagatatcaagaagaac
atcgacaggctggtcgacaaggactacatggagcgcgaggagaacaacgagtacagctac
atcgcatag
DBGET
integrated database retrieval system
