Neofusicoccum parvum: UCRNP2_823
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Entry
UCRNP2_823 CDS
T03126
Name
(GenBank) putative atp-dependent rna helicase rok1 protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
npa
Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npa03009
]
UCRNP2_823
Enzymes [BR:
npa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UCRNP2_823
Ribosome biogenesis [BR:
npa03009
]
Eukaryotic type
90S particles
Helicases
UCRNP2_823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
EOD52381
UniProt:
R1GVJ3
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MDFLKLLSRGTNVAKGATRNAPAAKTPSSGANLNPQLFGRDTPQIEQTAASNTQSKTKKR
KRGQNTTAATVDLPPELDFFGDAKREDKDAESQGAAADTEQGKSRDTEKETEGEIVGGEQ
PVTEEDCKRILRSHKVKITLLEDYRAQEAEEKAAKRKSKKRKKEQAQEPAQKKNKVQLFP
QPLTSFGQLRSRFNISRKLAENINAQGYTMPTEVQLSSLPLLVEASGPESNGIDLLTVAP
TGSGKTLAFLIPVIESLLRRPVKYLVLDEADVLLDPLFRQQTLDIWNACTSPLLRVSLWS
ATMGSNIEELAKNTITSRWNSIEVPDATRPNLVRLIVGLKDSAVPNIDHQLTYAATEQGK
LLAVRQLLHPTTSKRDNTTPTLRPPFLIFTQTIPRAQALYSELQYDIPPEAGGSSRIAVL
HSSLSSSLRDNVMARFRRGEVWVLITTDLLARGVDFRGINGVVNYDVPTSGAAYVHRAGR
TGRAGREGGVAVTLYTEEDVPYIRNIANVIRASEALRGEERTVKQWLLDALPTPSKRDKK
ELKRRGVEARRAGVERQEGRGRWRTTISTKSGYERKVEHNRKAAVEASRRRGEKVGGGDK
GGESEGEFGGFDD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggactttctcaagcttctgtcgcgcggcaccaatgtcgccaagggtgcgacgagaaac
gctcccgcggcgaagacgccttccagcggcgcaaacctgaacccgcaacttttcggccgc
gacactccccagatcgagcagactgccgcgtcgaacacgcagtcgaagacgaagaagcgc
aagcgaggccagaacaccaccgctgcgaccgtcgacctgcctccagagctcgactttttc
ggcgatgcaaagcgggaagacaaggatgcggaatctcagggcgcggccgcagacacagag
caggggaagagcagagacaccgagaaagaaacagagggagagattgttggcggagaacag
cctgtgacggaggaggactgcaagcggatcctgcgttcgcacaaggtgaaaatcacactg
ctggaagactacagggcacaagaggcggaggagaaagcagcaaagcggaagtcaaagaag
cgcaagaaggagcaggcgcaggagccggcccagaagaaaaacaaggtgcagctgttcccg
cagccgctcacgtcctttggccagctgaggtcccgattcaacatttccagaaaactggcc
gagaatatcaatgcgcaaggctacaccatgcctaccgaagtgcagctgtccagtctcccg
ctattggtggaagcatctggtccggagagcaacggtatcgatctcctcacagttgcaccg
acgggtagcggaaagacgctggcttttctaatcccagttatcgagtcgctgttgcgcagg
cctgttaagtacctggtcttggacgaggccgacgtcctgctcgaccctcttttccgccag
caaactctggacatctggaacgcctgcacaagcccgctcctccgagtcagcctctggtca
gccaccatgggatccaacattgaggagctcgccaaaaacaccattacctcccgctggaac
tccatcgaagtgcccgacgcgaccaggcccaacctagtccgccttatcgtcggtctcaag
gactcagcagtgcccaatatcgaccaccagctcacctatgccgccaccgaacaaggcaag
ctgctcgctgtccgccaactcctgcaccccaccacgtccaaacgcgacaacaccaccccg
accctccgcccccccttcctgatcttcacgcaaaccatcccccgcgcgcaagccctctac
tcggagctccaatacgacatcccccccgaagcgggcggctcgtcccgcatcgcagtcctg
cactcgtcgctctcgtccagcctgcgcgacaacgtcatggcgcgcttccggcgcggcgag
gtgtgggtgctgatcacgacggacctgctggcgcgcggggtcgacttccgcggcatcaac
ggcgtggtcaactacgacgtgccgacgtccggggcggcgtacgtgcaccgggcggggcgg
acggggcgggccggccgcgaaggcggcgtcgcggtcacgctgtacacggaggaggacgtg
ccgtacatccgcaacatcgccaacgtcatcagggcgagcgaggcgctgcgcggcgaggag
aggacggtcaagcagtggctgctcgacgcgctgcccaccccgagcaagcgcgacaagaag
gagctgaagcggcgcggcgtcgaggcgaggagggccggcgtggagcgccaggaggggagg
ggcaggtggcggactaccatcagcacgaagagcgggtacgagcggaaggtggagcataat
aggaaggcggcggtggaggcgagcaggaggaggggtgagaaggttggtggtggggataag
gggggtgagagcgagggcgagtttgggggttttgatgattag
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