Neofusicoccum parvum: UCRNP2_8241
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Entry
UCRNP2_8241 CDS
T03126
Name
(GenBank) putative glucose-repressible alcohol dehydrogenase transcriptional effector protein
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
npa
Neofusicoccum parvum
Pathway
npa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCRNP2_8241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_8241
Enzymes [BR:
npa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
UCRNP2_8241
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UCRNP2_8241
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
UCRNP2_8241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_LRWD1
Motif
Other DBs
NCBI-ProteinID:
EOD45041
UniProt:
R1GA55
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MYNQTHAQQGQHGMLNGNSHQRYAMQMNLAKFQQHQNHQHQNHQHPQHQDHGGHGAHGAN
FGNHQHNISSGALANSAPHFGANHLQNGTPGSVHSALAKAPNDHWALQLQYAQHARDMTI
SHSHARNHPSTNKGVTSAQANGMAKEPEKEERHRASDNSDKDDSQIWKALDLGGQNLKVL
SPALFDYTFLTKLYLNFNKLSFLSPAVGRLRNLRELDLSLNELRTLPPEIGMLVNLRELL
LFDNNIETLPYEMGSLYQLDMLGIEGNPNLDEQLKNIIVEHGTTELVKYLREQAPGPDPP
TERDWIVLDDTDAAPEEKFQVLSYNILCDRMATQSHYGYTPSGALSWEHRRDLILQELRS
RQPDIICLQEIDSESYNEYFRPTLAHDDYKGVYWPKSRARTMAEKEAKFVDGCCIFYKNS
KFILLDKQLLDFANLAINRPDMKGEHDIFNRVMPRDNIAVSAFFENRQTGARLMVVNAHV
YWDPIFKDVKVVQVAILMEQIQKFAEKYVKWPACTDKSVYRYANGDKEDETEPPEPLPEP
APSMTYSEPQQIPLVLCGDFNSTPDSGVYELIAHGALSNDHSDLGSYNYGHFTKQGMSHP
FALKSSYSNIGELSFTNYTPGFTGVIDYIFYATNALNATGLLGEVDKDYMQRVPGFPNYH
FPSDHLALLAEFVFKGRKERKTVEADFGPQRDRR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaccagacgcacgcgcaacaaggacagcacggcatgctgaacggcaactcccac
cagcgctatgcgatgcagatgaacttggccaagttccagcagcatcaaaaccatcagcac
cagaatcaccaacacccccaacaccaagaccacggtggacatggcgcgcatggggcgaac
tttggcaaccatcagcacaacatctcaagcggagctttggcaaactcggcaccacacttc
ggtgccaaccatctgcagaatggtactccgggaagcgtgcacagcgccctggcaaaggcg
ccgaacgaccactgggcgctgcaactgcagtacgcgcagcacgcccgcgacatgaccata
tcccactcccacgctcgcaatcacccttctacgaacaagggtgtaacatctgcacaggca
aatgggatggcgaaggagccagagaaggaagagcgccatcgagcctcggacaacagtgac
aaggatgactctcagatatggaaggccctggatctcggtggccagaatctcaaagttctc
tctccggctctttttgactacaccttccttactaagctttatctgaacttcaacaagctt
tctttcctgtctcccgcagttggaaggctcaggaacttgagggagttggatctgtcctta
aatgagctccgtacgctgccccctgaaatcggtatgctagtcaatcttcgtgagcttttg
ctcttcgacaataacattgagaccctgccctacgagatgggctccctgtatcaattggac
atgctcggtatcgagggcaacccaaacctcgacgagcagcttaagaacataatcgtcgaa
catggcacgaccgaactcgtcaagtacctgcgcgagcaagcgccgggcccggaccctccg
acggaacgtgactggatcgtccttgacgacacggacgctgcaccagaggagaaattccag
gttctgagctacaacattctgtgtgacaggatggccacgcaatcgcactacggatacaca
ccctctggagcattatcgtgggagcacagaagggatctcatcttgcaggaactccgtagc
cgtcaacctgacatcatctgccttcaagagattgactccgagagctacaacgagtacttc
cgcccgacactagctcacgacgactacaaaggcgtatattggcccaagtcaagggcaagg
acgatggctgaaaaggaagcgaagtttgtcgacggatgttgcatcttctacaagaacagc
aagttcatcttgcttgacaagcagcttctcgactttgccaacttggcgatcaaccggcct
gacatgaagggcgagcacgacatcttcaatcgcgtcatgcccagagacaacatcgctgta
tcagcgttcttcgagaaccgccaaactggggctcgcctcatggtcgtcaatgcgcacgta
tactgggaccccatcttcaaagatgtcaaggttgtacaggtggccattctcatggaacag
atccaaaagttcgcggagaagtatgtgaagtggccagcttgcaccgacaagtccgtttac
agatatgccaacggagacaaggaggatgagactgagcctccggagcctctgccagaaccg
gcgccttcgatgacttactcggagcctcaacaaattccgttggttctgtgcggtgatttc
aactcaactcctgactctggagtctatgagctgattgcccatggtgccctctccaacgac
cactctgaccttggcagctacaactatgggcacttcacgaagcagggcatgtcccatcct
ttcgccctcaagtcgagctactcgaacattggcgagctcagcttcaccaactacacccct
ggtttcactggcgtcatcgactacatcttctacgcgacgaatgcgctcaacgctaccggc
ctgctgggagaggtggacaaggactatatgcaacgcgtgcccgggttcccgaactaccac
ttcccgagcgatcacttggcgctgctggcagagtttgtgttcaaaggccggaaagagaga
aagaccgtagaagcagactttgggccgcaacgagaccgtcgttag
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