KEGG   Neofusicoccum parvum: UCRNP2_8271
Entry
UCRNP2_8271       CDS       T03126                                 
Name
(GenBank) putative wd repeat protein
  KO
K20409  SEA/GATOR complex protein SEA3/WDR59
Organism
npa  Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:npa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:npa04131]
    UCRNP2_8271
Membrane trafficking [BR:npa04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    UCRNP2_8271
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_EIPR1 Beta-prop_IFT122_1st DSE1_N Beta-prop_EML_2 EIF3I Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd MIOS_WD40 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st DNAI3_WD Beta-prop_SCAP
Other DBs
NCBI-ProteinID: EOD45023
LinkDB
Position
Unknown
AA seq 472 aa
MHPHGDSSPFDSPTFGRDASIRVDEPVGSASISPSSRDIVLASREGLHIIDLDNPYSPPR
HLAHRTLWEVADVQWSPFASHDGLVASTSNQKALIWDLNHGNQPPLTLHAHSRAITDINL
SAHHPDILATCAVDTFVHKWDLRTADKPVFSYAQWDGGAAQVKWNRQDPHILASAHDRFL
CIWDERKGVQPLRTIEAHRSKIYGVDWNRTRQGGILTCSLDGSIKFWDYTREEDSMLERV
IRTPFGVWRARHTPFGWGALAMPQRGDFDLHLYDRRLRDGVKRDAKVPAVHTFKGHNDQV
KEFLWRTRGDVTDEGYDEREFQLVSWGSDRQLNLYRIDSSMLGSVGYKKGEQVRRRFHMT
RQGALYKTFHDEMPTSIPQAKAPEQHQVHTFTAAPSQLSALFQSAGMSKPSLPYAQAAFQ
GPGASARDRGLTTMQARTREKKTVDKLTWMQGMYSRQTKRYYGTRLKVWVTR
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgcacccgcacggcgatagctcgcccttcgacagccctacctttggccgcgatgcttcg
atccgtgtcgatgagcccgttggctcggcctccatctcgcccagcagccgcgacatcgtg
ctcgcatcgcgggagggcttgcacatcatagaccttgacaacccctactcgccgccgcgc
catcttgcccatcgcaccctgtgggaggtcgccgacgtgcagtggtcgccctttgccagc
cacgacggccttgtcgcgagcacctcgaaccagaaagccctgatctgggatctgaaccat
ggcaaccagccgccgctcaccctgcacgcccactcgcgcgccatcaccgacatcaacctc
tcggcccatcacccggacatcctcgcgacctgcgccgtcgacaccttcgtccacaagtgg
gacctgcgcactgctgacaagcctgtcttctcgtatgcgcagtgggatggaggcgctgcc
caggtcaagtggaacaggcaggatccgcatatcctggcctcggctcacgacagattcctc
tgcatctgggacgaacgcaaaggtgtgcagcctctgcgcaccatcgaggcccacaggagc
aagatttatggcgtggattggaaccgcacgcgccagggtggaatattgacatgctcgttg
gatggctccataaagttctgggactacactcgcgaggaagattcgatgctggagcgcgtc
attaggacgccatttggcgtctggcgagcacggcacacgcctttcgggtggggcgcgctt
gctatgccccagcgtggagactttgacttgcacctctacgacaggcgtttgcgtgacggt
gtcaaacgggatgccaaagtgccggcagtccatactttcaaaggccacaacgatcaggtc
aaggagtttctttggagaacgcgcggtgacgttacggatgaaggctacgatgagcgtgaa
ttccaacttgtttcgtggggcagtgatcgtcagctgaatctctatcgcatcgactcatcc
atgctcggttccgttggctataaaaagggtgagcaggtgcgcaggagattccacatgacg
cgccagggagccttgtacaagaccttccacgatgaaatgcccacctcgatcccgcaggcc
aaggccccggagcagcaccaggtccatacttttactgccgctccaagccaactcagtgcc
ctgttccagtctgccggtatgagcaagcccagcctcccgtatgctcaagcagccttccaa
ggacctggtgccagcgcccgcgaccgtggccttacgacgatgcaagcccgcacgcgagag
aagaagactgtggacaagctcacgtggatgcaggggatgtactctcgccagaccaagcgc
tattatgggactcgcctgaaagtctgggtgacgagataa

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