Neofusicoccum parvum: UCRNP2_859 Help Entry UCRNP2_859        CDS       T03126                                  Name (GenBank) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism npa  Neofusicoccum parvum Brite KEGG Orthology (KO) [BR:npa00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:npa03021]     UCRNP2_859 Enzymes [BR:npa01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      UCRNP2_859     5.6.2.5  RNA 5'-3' helicase      UCRNP2_859 Transcription machinery [BR:npa03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      UCRNP2_859 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_30 AAA_19 UvrD-helicase Viral_helicase1 DEAD ResIII RuvB_N nSTAND3 Motif Other DBs NCBI-ProteinID:  EOD52357 UniProt:  R1EXL8 LinkDB All DBs Position Unknown AA seq 1977 aa AA seqDB search MGEALVNQLNELKALPEELHLFCPRTASDPYGVYLDEDLVGQLDDEDEAEKRQRLKKLSE AEARKNLVLDCLPIFAFDGADAAGYQEWLKEKLNQAMTSCDVCIRLYHRARNELKHKLEE EYDSDEVAQFMGVFDNMNLERITSGLDHASQLLRDAPPEKRGIASLDNQGMYALFESLSC EALLKNEALLAKHFDEPFNLVQTKKRLRLGTYTAAMTRFLFSTNEDRYIWAVTSYTRFKR GLTKTEFAAAVRDPLFDAMKRVQLVCLDAPFLPAFWGGVRIIMDKLDKELITHSLRAIEI DVCKLALEHLQFDFTGFKDLIGTVQQLLEKSAVDFWDAMGAISPVTVIEQILGNKTLDYL LLHVEKPDESPTLDEIFGWVNPFFASIKPSNQTPACRAVVHQLLKRFQDDKYTRASRTYC YELGLQTLLQSLRIMNKGNTRSTFVGYATMSDMLDFVHLQSEDILATIKVSKSLQQGNLA DLGLQVVQNTLSLDCLSLEVDREALLRGEQLHHDMNFTMSPIWEAIISSIRPGDVELATK VLMGAGLLVGMEKFVTKSGVQMSKSMNWWNHTFSSYSKAVSGVLEKLSDFSPSDLDKLFD AKESAHAVIIHLFSSESEPRQAAVEVIKAVSSQDSRRDALAHLVKAFYFNALKPVEQSLR RIAKKQVFAPTSSMLKLCTDIVDVLCNPQDGILRSRTLTLEEAAITEQLWGTLWQALMTI FEKTEDWSNVGHDKTHMMDFCRDTMQFADALYDEYSHFASALSQANSQNNEDGQSDSGKQ LLKWPQITMGGMSKWLRLRDEYLISKAVALTSKLLVRLRDADIDIADDTRLFIEEILEGK VRTKLTPNQQAELERALEKHLGYSIRKEEKLPKKVKQGSISAWATSGTGRSSPASSGAEE PDSLSKIVADSTRGADAFKKRQLLIQQQAKAKKDAAEDKARSEFSQKRAREKLLLQKQKE EAIRKAKKNLPLMGVAAQTAEAGSGTRGIGVTGKDHSVKGEGVMVSSDESDDDDEEMDEE LFGPSVKREAKLARAKLPLLPQGPVKKKRVQRSFKDMRARLAPDLSSLHKTILGWDYFHE GDFPPNSRTDIYTRVPNKFQSPFDYKNTFQPLLTLEAWQGFVKAREEGTFRAFEIKVINR SNVDAFIELSTNMSHADNKEISISEGDICLLSKAPQPANAPDAPNCLARVYRITRKKAHL EILYRLVHGSSLIASLVPNAIIHGVKIQSITPLEREYGALVGLQFYDLMDEIIKAKPSPL LKYSDKQLESFKETYSLNRAQAKAVKSAIDNDAFTLIQGPPGSGKTKTIVAIVGALLTDS LRNGTGTVINKPQPAGMNPAAARNNLPAPKKLLVCAPSNAAVDELVMRFKEGVKTTNGQH RKISVVRLGRSDAMNINVKDVTLEQLVNARLNINPDPNSKDAREKTGELMNEHKIVSEKL REARDKLDSGEVKGDELSKLKDEFDALRNRKSSLGRKIDDAKDAEAGQSRAAELNRKRAQ QSILDEAHVICATLSGSGHEMFQHLNIEFETVVVDEAAQCVEMSALIPLKYGCAKAILVG DPKQLPPTVFSKEAARFQYEQSLFVRMQTNHPDDVHLLDTQYRMHPEISYFPSQTFYDGR LLDGDDMAGLREKPWHSSMLLGPYRFFDVQGQHQAAPKGHSLINIAEIDVAMALYSRLMN DFQDCDFRGKIGVITPYKSQLRELKDRFSRRYGESVFENVEFNTTDAYQGRESEIIIFSC VRASPAGGIGFLQDIRRMNVGLTRAKSSLWVLGNSQSLVRGQFWKLLVEDAQKRERYTQG NNLMAMLKKHSSNFPAPKGAFAKPVTNGIKAIKREEPPLQPVKQERKGSSSSESSGKKVK TEEPSLRKPAPVQIKKEKKVIDDDWGDFFGEEPGKQDEDGDVDMKDETPAANSSVKSSRQ SSEASASVDPPSRPGSASNSNKNGGGGGGPARPKMVPPKQKRKADPFMPRNPKKPRP NT seq 5934 nt NT seq  +upstreamnt  +downstreamnt atgggtgaggcgctggtgaaccagctcaatgagctcaaggctctacctgaagagctgcac cttttctgccctcggaccgcctcggatccatacggcgtctacctggacgaagacctggtc ggccagttggacgacgaagatgaggcggagaagcgtcagcggctcaagaagctgtcggag gccgaggccaggaagaaccttgtcctggactgtctccccatattcgccttcgacggggcc gatgcagcaggataccaggaatggctgaaggagaagctgaaccaggcgatgacgtcctgc gacgtctgcatcaggttatatcacagggcacgcaacgagctgaagcacaagttggaggag gaatacgattcagatgaggtcgcgcaattcatgggtgtcttcgacaacatgaacttggaa aggatcaccagcggtcttgaccatgcgtcgcagcttctgcgggacgcacctccggagaag cgaggcatagcgagcctggacaatcagggcatgtacgcgctctttgaatcactcagctgt gaggcgctcctgaaaaacgaggcgcttcttgcgaaacatttcgacgagccattcaacctc gtccagacaaagaagaggttacggcttggcacttacacggcggccatgactaggtttctg ttcagcaccaatgaggatcgctacatctgggctgtaacatcttacacgagattcaagcgc ggcctcaccaagactgaattcgccgctgcagtccgtgacccgctgttcgacgcaatgaaa agggtccagctcgtctgcttagatgctcctttcttgcccgcgttctggggtggtgttagg atcatcatggacaagctggacaaggagcttatcacacattccctgcgcgccattgagatc gacgtatgcaagctcgcgctggagcacctgcagttcgattttaccggcttcaaggatctc atcggcactgttcagcagcttctcgaaaagtcggccgttgatttctgggatgctatgggc gccatttcgccggtcacggtcatcgagcagatcctggggaacaaaactctggattacctg ttgctgcatgtggagaagcccgatgaatccccgactctggacgagatcttcggctgggtc aaccccttctttgcctcgatcaagccctccaatcagactccggcctgccgtgctgttgta caccaacttctgaaacgctttcaggatgacaagtacacacgtgcctcacggacgtactgc tacgagcttggtctgcagactctgctgcagtccctgcggattatgaacaaaggaaacacc cgctccaccttcgtgggttatgccacgatgtctgatatgctcgactttgtccatcttcag agcgaggacatcctagccaccatcaaggtctccaaaagccttcagcaaggtaatcttgct gaccttggccttcaagtggttcagaatacgctatcgcttgactgcctgtccttggaagtg gacagagaagcccttttgcgcggcgagcagttgcatcatgacatgaactttactatgtct cctatttgggaagctatcatcagttccatccgccccggcgatgttgagcttgccacaaag gttctcatgggcgctggtctgcttgttgggatggagaagtttgtcaccaagtcgggtgta caaatgtccaagagcatgaattggtggaatcacaccttttccagctattccaaggccgtt agcggtgttctcgagaagctctccgacttttcaccaagcgatctcgacaaactcttcgat gctaaagaatccgctcacgccgtcatcatccatctattctcctccgaatcggagccccgt caggctgctgttgaggtcatcaaagccgtgagctctcaagacagtcgaagagatgctctt gcacatctcgtcaaggcgttctacttcaatgcccttaagccagtcgagcaatccctccgg cgcattgccaagaagcaggtgttcgctcctacgtcaagtatgctgaagctgtgtaccgac atcgtggacgtgctttgcaacccgcaggatggtattctgaggtcacgcaccttgaccttg gaggaagcggcaatcacagaacaactatggggtacgctgtggcaagctctgatgaccatt ttcgagaagacggaggattggagcaacgttggtcatgacaaaacgcacatgatggacttc tgccgcgacaccatgcaatttgcggatgcgctgtacgatgaatacagccattttgctagt gctctcagccaggccaacagccagaataatgaggacggtcagtcagatagtggaaagcag ctgctgaagtggccgcaaatcactatgggtggcatgtccaagtggttacgcttgcgcgac gagtaccttattagcaaagctgtggctctcacgagcaaacttctcgttcggttgcgagat gcggacatcgacattgctgatgatacccgactcttcatcgaggaaatcctggagggcaag gtccggactaaattgactccgaatcagcaagctgagttggaacgggccctcgagaagcat ctcggctactccatccgaaaggaggagaagcttccgaagaaggttaagcagggatccatc agcgcgtgggcgacgagcggtaccggcagatcctctccagcaagttcgggtgctgaagag cccgacagtctgagcaagattgttgcagacagcacaaggggagcagatgcattcaagaag cggcaactccttattcaacagcaggccaaagcgaaaaaggatgccgcagaagacaaagcc agaagcgagttcagccagaaacgtgctcgtgaaaagctgctacttcagaagcagaaggag gaagctatacgtaaagctaagaaaaacctgcctctcatgggagttgctgcccagacggca gaagcaggatctggtactcgtggtattggtgtgactggcaaggatcatagcgtcaagggc gaaggtgtcatggtctcctcggatgagagtgatgacgatgacgaagagatggatgaggag ctgttcggcccctcagtaaagagggaagcaaaattggcaagagcaaaactccccttattg ccacaaggtccggtcaagaaaaagagggtacagcggtcgttcaaggacatgcgcgcacga ttggctcctgatttgtcttcattgcacaagactatccttggctgggactatttccacgag ggtgactttccacccaactcccggacggacatctatactcgggtacccaacaagttccag tcgcccttcgactacaagaatacgttccagccgctccttacgcttgaggcatggcaggga tttgttaaggcgcgagaggagggcactttcagggcctttgagatcaaggtcatcaaccgc tccaacgttgatgctttcatcgaattgtctacaaacatgtcacatgcggacaacaaggag atctccatctcggaaggcgacatttgtcttttgtcgaaggcgccccagccggccaatgcg ccagacgcgccaaactgcctggcaagggtctaccgcatcacccgtaagaaagcgcatctc gagatcttgtaccgtcttgtccacggctcgtctctgattgcatcgctcgtgcccaacgcc atcatccatggagtcaagattcagtcgatcactcctctcgagcgtgaatatggtgcgctg gtgggattgcagttctacgatctcatggatgagattatcaaggccaagccgtcaccactc ctgaagtactcggacaagcagcttgagtcgttcaaagagacgtacagtcttaacagggca caggcgaaggcagtcaagtcagcaatcgacaatgatgccttcacgctgatccaaggtcct cctggttccggtaaaacgaagacaattgtcgccattgtcggcgctcttttgacggatagc cttcgaaatggcacgggcaccgtcatcaacaagccgcagcctgctggcatgaatcccgct gcagcacgtaacaacctaccagcaccgaagaaactgcttgtttgtgcgcccagcaatgcc gctgttgacgaattggtcatgcgtttcaaggagggcgtcaagacgaccaatggccagcat cgcaagatttcagtcgtcagattggggcgtagcgacgccatgaacatcaacgtgaaggac gtgactctggagcaactcgtcaacgccaggctcaatatcaaccctgatccgaacagcaag gatgcacgggagaagaccggagagctcatgaatgagcacaagatagtgtcggagaagctt cgagaggcgcgcgataaacttgattccggagaagtcaagggtgatgagttgtctaaactc aaggatgagttcgatgctcttcgtaaccgcaagagttcactgggcaggaagatcgatgat gctaaggatgctgaggctggccagagccgtgcagccgagctcaacaggaagcgggcccag caatccatcctggacgaagctcatgtcatctgcgcaaccctcagtggatcaggccatgag atgttccaacatctgaacattgagttcgaaactgtcgtcgttgacgaagccgcgcagtgc gttgagatgagtgctctcatccctctgaagtacggctgcgcaaaggccatcttggtcggt gatcctaagcagctgcctcctacggtcttctcgaaggaggctgcgcgcttccagtacgag cagagtttgttcgtccgtatgcagacgaaccacccagacgacgttcacctgcttgatacg caataccgtatgcatcccgagatcagttacttcccgtcacagaccttctacgatggcaga ctattggacggcgacgacatggctggcttgcgcgagaagccgtggcacagcagtatgctg ctcggcccttatcgcttcttcgacgtccaaggtcagcaccaagcagcaccgaagggacac tcgctcatcaacatcgccgagatcgatgtcgcaatggctctatacagtcgcctgatgaac gacttccaagactgcgatttccgtggcaagattggtgtcatcacaccctacaagtctcag ctccgcgaactcaaagaccgcttctcgcggcgatacggcgagtcggtctttgagaacgtc gagttcaacacgaccgacgcataccagggtcgcgagagcgagatcatcatcttctcgtgc gtgcgtgcctcaccggcgggcggcatcggtttcttgcaggacatccgtcgtatgaacgtc ggtcttacccgtgccaagagctcgctctgggtcctgggcaactcgcagtctctagtccgc ggccagttctggaagctactggtcgaggacgcgcagaagcgggagcggtacacgcaaggc aacaacctcatggccatgctcaagaagcactcgtcaaacttcccggcgccgaagggcgcg ttcgcaaagccggttaccaacggcatcaaggcgatcaagcgcgaagagccgccgctgcag ccggtgaaacaagagagaaaggggagctcgtcatcggagagcagcggcaagaaggtcaag acggaggaaccatcgctccggaagccggcgccggtgcagatcaagaaggagaagaaggtc attgacgacgactggggcgacttctttggcgaggagccaggcaagcaggacgaggacgga gatgtggacatgaaggatgaaacgccggcggccaacagcagcgtcaaatcgtcgcgtcaa agctcggaagcgtcggcgtcggtcgatcctccttcccggccgggttccgcgagcaacagc aacaagaacggcggaggcggaggtgggccggcgagaccgaagatggtgccgccgaagcag aagaggaaggcggatccgttcatgccgcggaatccgaagaagccgaggccatga

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