Neofusicoccum parvum: UCRNP2_8599
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Entry
UCRNP2_8599 CDS
T03126
Name
(GenBank) putative small nuclear ribonucleo protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
npa
Neofusicoccum parvum
Pathway
npa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCRNP2_8599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_8599
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UCRNP2_8599
mRNA degradation factors
5'-3' decay
Lsm complex
UCRNP2_8599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-ProteinID:
EOD44681
UniProt:
R1G921
LinkDB
All DBs
Position
Unknown
AA seq
137 aa
AA seq
DB search
MPPMVPQLPPQMFTTAAQLLDLTDKKLMVALRDGRKLIGVLRSWDQFGMEASCANLVLQD
TIERIFVQNLYADINRGVFLDLDKDDYIPEPFEQAPVEQVFALQKQEIEERKKRDKLRRK
NLQAHGFEGEHSGEAIL
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaatggtgccccagcttccgccgcagatgttcaccaccgccgcacaactcctc
gacctgaccgacaagaagctcatggtcgccctgcgcgacggacggaagctcataggcgtg
cttcggagctgggaccagttcggtatggaggcttcttgcgcgaacctcgtcctccaggac
accatcgagcgcatcttcgtgcagaacctgtacgccgacatcaaccgtggcgtgttcctc
gacctcgataaagacgactatatccccgagcccttcgaacaagcaccggtcgagcaggtc
ttcgcgctgcagaagcaggagatcgaggagcgcaagaagagagacaagctcaggcggaag
aacctgcaggcccacggcttcgagggcgagcacagcggcgaagctatactatga
DBGET
integrated database retrieval system
